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The Line Height Absorption (LHA) method uses absorption of light to estimate chlorophyll-a. While most users consider regional variability and apply corrections, the effect of temporal variability is typically not explored. The Northern Gulf of Alaska (NGA) was selected for this study because there was no published regional value and its large swings in temporal productivity would make it a good candidate to evaluate the effect of temporal variability on the relationship. The mean NGA value of 0.0114 obtained here should be treated with caution, as variation in the slope of the relationship (aLH*), and thus chlorophyll-a estimates, in the NGA region varied by ∼25% between spring (aLH* = 0.0109) and summer (aLH* = 0.0137). Results suggest that this change is driven by a shift in pigment packaging and cell size associated with changes in mixed layer depth and stratification. Consideration of how temporal variability may affect the accuracy of the LHA method in other regions is thus recommended.more » « less
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Measuring net community production (NCP) is a challenging, yet important, aspect of oceanography. Methods based on discrete sample collection often have low spatial and temporal resolution, while expensive instruments are required to obtain continuous NCP measurements at high resolution. To address these issues, Izett and Tortell (2020) created a novel, autonomous system called the Pressure of In-situ Gases Instrument (PIGI) and shared their design with the community. The system yields high-resolution surface water O2 and N2 measurements that are used to estimate NCP along a ship transect or at a fixed field station. This article provides a description of an updated PIGI system that was tested in a series of cruises in the coastal South Atlantic Bight (SAB). The data collected suggest that it performs equally as well as the original, providing high spatial resolution NCP measurements. Unfortunately, we believe that the SAB coastal and estuaries violate the steady state assumption due to horizontal mixing driven by tidal forces. Thus, we cannot recommend the PIGI system for use in the coastal SAB, but we encourage its use in open ocean waters that do not violate the assumptions on which this system was built. We document the updates to the PIGI system, share tips and tricks on its use, and discuss the data collected.more » « less
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The field of oceanography is transitioning from data-poor to data-rich, thanks in part to increased deployment ofin-situplatforms and sensors, such as those that instrument the US-funded Ocean Observatories Initiative (OOI). However, generating science-ready data products from these sensors, particularly those making biogeochemical measurements, often requires extensive end-user calibration and validation procedures, which can present a significant barrier. Openly available community-developed and -vetted Best Practices contribute to overcoming such barriers, but collaboratively developing user-friendly Best Practices can be challenging. Here we describe the process undertaken by the NSF-funded OOI Biogeochemical Sensor Data Working Group to develop Best Practices for creating science-ready biogeochemical data products from OOI data, culminating in the publication of the GOOS-endorsed OOI Biogeochemical Sensor Data Best Practices and User Guide. For Best Practices related to ocean observatories, engaging observatory staff is crucial, but having a “user-defined” process ensures the final product addresses user needs. Our process prioritized bringing together a diverse team and creating an inclusive environment where all participants could effectively contribute. Incorporating the perspectives of a wide range of experts and prospective end users through an iterative review process that included “Beta Testers’’ enabled us to produce a final product that combines technical information with a user-friendly structure that illustrates data analysis pipelines via flowcharts and worked examples accompanied by pseudo-code. Our process and its impact on improving the accessibility and utility of the end product provides a roadmap for other groups undertaking similar community-driven activities to develop and disseminate new Ocean Best Practices.more » « less
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