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The nucleolus is a multiphasic biomolecular condensate that facilitates ribosome biogenesis, a complex process involving hundreds of proteins and RNAs. The proper execution of ribosome biogenesis likely depends on the material properties of the nucleolus. However, these material properties remain poorly understood due to the challenges of in vivo measurements. Here, we use micropipette aspiration (MPA) to directly characterize the viscoelasticity and interfacial tensions of nucleoli within transcriptionally activeXenopus laevisoocytes. We examine the major nucleolar subphases, the outer granular component (GC) and the inner dense fibrillar component (DFC), which itself contains a third small phase known as the fibrillar center (FC). We show that the behavior of the GC is more liquid-like, while the behavior of the DFC/FC is consistent with that of a partially viscoelastic solid. To determine the role of ribosomal RNA in nucleolar material properties, we degrade RNA using RNase A, which causes the DFC/FC to become more fluid-like and alters interfacial tension. Together, our findings suggest that RNA underlies the partially solid-like properties of the DFC/FC and provide insights into how material properties of nucleoli in a near-native environment are related to their RNA-dependent function.more » « lessFree, publicly-accessible full text available June 3, 2026
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There is growing evidence that biological condensates, which are also referred to as membraneless organelles, and liquid-liquid phase separation play critical roles regulating many important cellular processes. Understanding the roles these condensates play in biology is predicated on understanding the material properties of these complex substances. Recently, micropipette aspiration (MPA) has been proposed as a tool to assay the viscosity and surface tension of condensates. This tool allows the measurement of both material properties in one relatively simple experiment, in contrast to many other techniques that only provide one or a ratio of parameters. While this technique has been commonly used in the literature to determine the material properties of membrane-bound objects dating back decades, the model describing the dynamics of MPA for objects with an external membrane does not correctly capture the hydrodynamics of unbounded fluids, leading to a calibration param- eter several orders of magnitude larger than predicted. In this work we derive a new model for MPA of biological condensates that does not require any calibration and is consistent with the hydrodynamics of the MPA geometry. We validate the predictions of this model by conducting MPA experiments on a standard silicone oil of known material properties and are able to predict the viscosity and surface tension using MPA. Finally, we reanalyze with this new model the MPA data presented in previous works for condensates formed from LAF-1 RGG domains.more » « less
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At low Reynolds numbers, axisymmetric ellipsoidal particles immersed in a shear flow undergo periodic tumbling motions known as Jeffery orbits, with the orbit determined by the initial orientation. Understanding this motion is important for predicting the overall dynamics of a suspension. While slender fibres may follow Jeffery orbits, many such particles in nature are neither straight nor rigid. Recent work exploring the dynamics of curved or elastic fibres have found Jeffery-like behaviour along with chaotic orbits, decaying orbital constants and cross-streamline drift. Most work focuses on particles with reflectional symmetry; we instead consider the behaviour of a composite asymmetric slender body made of two straight rods, suspended in a two-dimensional shear flow, to understand the effects of the shape on the dynamics. We find that for certain geometries the particle does not rotate and undergoes persistent drift across streamlines, the magnitude of which is consistent with other previously identified forms of cross-streamline drift. For this class of particles, such geometry-driven cross-streamline motion may be important in giving rise to dispersion in channel flows, thereby potentially enhancing mixing.more » « less