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Abstract In this paper, we develop a mixed stochastic approximation expectation‐maximization (MSAEM) algorithm coupled with a Gibbs sampler to compute the marginalized maximum a posteriori estimate (MMAPE) of a confirmatory multidimensional four‐parameter normal ogive (M4PNO) model. The proposed MSAEM algorithm not only has the computational advantages of the stochastic approximation expectation‐maximization (SAEM) algorithm for multidimensional data, but it also alleviates the potential instability caused by label‐switching, and then improved the estimation accuracy. Simulation studies are conducted to illustrate the good performance of the proposed MSAEM method, where MSAEM consistently performs better than SAEM and some other existing methods in multidimensional item response theory. Moreover, the proposed method is applied to a real data set from the 2018 Programme for International Student Assessment (PISA) to demonstrate the usefulness of the 4PNO model as well as MSAEM in practice.