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Free, publicly-accessible full text available September 18, 2026
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The nucleolus is a multiphasic biomolecular condensate that facilitates ribosome biogenesis, a complex process involving hundreds of proteins and RNAs. The proper execution of ribosome biogenesis likely depends on the material properties of the nucleolus. However, these material properties remain poorly understood due to the challenges of in vivo measurements. Here, we use micropipette aspiration (MPA) to directly characterize the viscoelasticity and interfacial tensions of nucleoli within transcriptionally activeXenopus laevisoocytes. We examine the major nucleolar subphases, the outer granular component (GC) and the inner dense fibrillar component (DFC), which itself contains a third small phase known as the fibrillar center (FC). We show that the behavior of the GC is more liquid-like, while the behavior of the DFC/FC is consistent with that of a partially viscoelastic solid. To determine the role of ribosomal RNA in nucleolar material properties, we degrade RNA using RNase A, which causes the DFC/FC to become more fluid-like and alters interfacial tension. Together, our findings suggest that RNA underlies the partially solid-like properties of the DFC/FC and provide insights into how material properties of nucleoli in a near-native environment are related to their RNA-dependent function.more » « lessFree, publicly-accessible full text available June 3, 2026
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Free, publicly-accessible full text available February 1, 2026
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Surface-attached cells can sense and respond to shear flow, but planktonic (free-swimming) cells are typically assumed to be oblivious to any flow that carries them. Here, we find that planktonic bacteria can transcriptionally respond to flow, inducing expression changes that are beneficial in flow. Specifically, we use microfluidic experiments and quantitative modeling to show that in the presence of flow, planktonicPseudomonas aeruginosainduce shear rate–dependent genes that promote growth in low-oxygen environments. Untangling this mechanism revealed that in flow, motileP. aeruginosaspatially redistribute, leading to cell density changes that activate quorum sensing, which in turn enhances the oxygen uptake rate. In diffusion-limited environments, including those commonly encountered by bacteria, flow-induced cell density gradients also independently generate oxygen gradients that alter gene expression. Mutants deficient in this flow-responsive mechanism exhibit decreased fitness in flow, suggesting that this dynamic coupling of biological and mechanical processes can be physiologically significant.more » « less
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In fiber spinning of photopolymers, surface tension limits the diameter of the fiber that can be produced due to the Rayleigh–Plateau instability. Submerging a pre-fiber jet in a miscible environment liberates the system from capillary effects, thus allowing the jet to be stretched into thin threads without instability. In this work, we systematically investigated a spinning method using miscible liquids, called jet-assisted wet spinning (JAWS), where stretching is achieved by a nearby submerged liquid jet. The diameter of the pre-fiber jet is a function of its flow rate and position relative to the assisting submerged liquid jet. A particular case where the main jet is modeled as the Landau–Squire jet is used to demonstrate the tracer-like thinning behavior of the pre-fiber jet. Experiments show that buoyancy has a significant impact on the pre-fiber jet diameter because of its influence on the entrainment trajectory. Overall, our results demonstrate the potential for the parallelization of JAWS for high-throughput fiber production.more » « lessFree, publicly-accessible full text available December 9, 2025
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Thin-film equations are utilised in many different areas of fluid dynamics when there exists a direction in which the aspect ratio can be considered small. We consider thin free films with Marangoni effects in the extensional flow regime, where velocity gradients occur predominantly along the film. In practice, because of the local deposition of surfactants or input of energy, asymmetric distributions of surfactants or surface tension more generally, are possible. Such examples include the surface of bubbles and the rupture of thin films. In this study, we consider the asymmetric thin-film equations for extensional flow with Marangoni effects. Concentrating on the case of small Reynolds number$$ Re $$, we study the deposition of insoluble surfactants on one side of a liquid sheet otherwise at rest and the resulting thinning and rupture of the sheet. The analogous problem with a uniformly thinning liquid sheet is also considered. In addition, the centreline deformation is discussed. In particular, we show analytically that if the surface tension isotherm$$\sigma = \sigma (\varGamma )$$is nonlinear (surface tension$$\sigma$$varies with surfactant concentration$$\varGamma$$), then accounting for top–bottom asymmetry leads to slower (faster) thinning and pinching if$$\sigma = \sigma (\varGamma )$$is convex (concave). The analytical progress reported in this paper allows us to discuss the production of satellite drops from rupture via Marangoni effects, which, if relevant to surface bubbles, would be an aerosol production mechanism that is distinct from jet drops and film drops.more » « less
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The Flory–Huggins theory describes the phase separation of solutions containing polymers. Although it finds widespread application from polymer physics to materials science to biology, the concentrations that coexist in separate phases at equilibrium have not been determined analytically, and numerical techniques are required that restrict the theory’s ease of application. In this work, we derive an implicit analytical solution to the Flory–Huggins theory of one polymer in a solvent by applying a procedure that we call the implicit substitution method. While the solutions are implicit and in the form of composite variables, they can be mapped explicitly to a phase diagram in composition space. We apply the same formalism to multicomponent polymeric systems, where we find analytical solutions for polydisperse mixtures of polymers of one type. Finally, while complete analytical solutions are not possible for arbitrary mixtures, we propose computationally efficient strategies to map out coexistence curves for systems with many components of different polymer types.more » « less
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Lubrication theory is adapted to incorporate the large normal stresses that occur for order-one Deborah numbers,$$De$$, the ratio of the relaxation time to the residence time. Comparing with the pressure drop for a Newtonian viscous fluid with a viscosity equal to that of an Oldroyd-B fluid in steady simple shear, we find numerically a reduced pressure drop through a contraction and an increased pressure drop through an expansion, both changing linearly with$$De$$at high$$De$$. For a constriction, there is a smaller pressure drop that plateaus at high$$De$$. For a contraction, much of the change in pressure drop occurs in the stress relaxation in a long exit channel. An asymptotic analysis for high$$De$$, based on the idea that normal stresses are stretched by an accelerating flow in proportion to the square of the velocity, reveals that the large linear changes in pressure drop are due to higher normal stresses pulling the fluid through the narrowest gap. A secondary cause of the reduction is that the elastic shear stresses do not have time to build up to their steady-state equilibrium value while they accelerate through a contraction. We find for a contraction or expansion that the high$$De$$analysis works well for$$De>0.4$$.more » « less
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Pressure-driven flows of viscoelastic fluids in narrow non-uniform geometries are common in physiological flows and various industrial applications. For such flows, one of the main interests is understanding the relationship between the flow rate$$q$$and the pressure drop$$\Delta p$$, which, to date, is studied primarily using numerical simulations. We analyse the flow of the Oldroyd-B fluid in slowly varying arbitrarily shaped, contracting channels and present a theoretical framework for calculating the$$q-\Delta p$$relation. We apply lubrication theory and consider the ultra-dilute limit, in which the velocity profile remains parabolic and Newtonian, resulting in a one-way coupling between the velocity and polymer conformation tensor. This one-way coupling enables us to derive closed-form expressions for the conformation tensor and the flow rate–pressure drop relation for arbitrary values of the Deborah number ($$De$$). Furthermore, we provide analytical expressions for the conformation tensor and the$$q-\Delta p$$relation in the high-Deborah-number limit, complementing our previous low-Deborah-number lubrication analysis. We reveal that the pressure drop in the contraction monotonically decreases with$$De$$, having linear scaling at high Deborah numbers, and identify the physical mechanisms governing the pressure drop reduction. We further elucidate the spatial relaxation of elastic stresses and pressure gradient in the exit channel following the contraction and show that the downstream distance required for such relaxation scales linearly with$$De$$.more » « less
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A hallmark of biomolecular condensates formed via liquid-liquid phase separation is that they dynamically exchange material with their surroundings, and this process can be crucial to condensate function. Intuitively, the rate of exchange can be limited by the flux from the dilute phase or by the mixing speed in the dense phase. Surprisingly, a recent experiment suggests that exchange can also be limited by the dynamics at the droplet interface, implying the existence of an ‘interface resistance’. Here, we first derive an analytical expression for the timescale of condensate material exchange, which clearly conveys the physical factors controlling exchange dynamics. We then utilize sticker-spacer polymer models to show that interface resistance can arise when incident molecules transiently touch the interface without entering the dense phase, i.e., the molecules ‘bounce’ from the interface. Our work provides insight into condensate exchange dynamics, with implications for both natural and synthetic systems.more » « less
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