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  1. Bridging the current gap between the precision and efficiency demonstrated by natural systems and synthetic materials requires interfacing and independently controlling multiple stimuli-responsive building blocks in a single platform. The mentioned orthogonal control over material properties (i.e., the ability to selectively activate one stimuli-responsive moiety without affecting another) could pave the way for a multitude of applications, including logic-gated optoelectronics, on-demand drug delivery platforms, and molecular shuttles, for example. In this Review, we highlight the recent successful strategies to achieve orthogonal control over material properties using a combination of stimuli-responsive building blocks and multiple independent stimuli. We begin by surveying the fundamental studies of multi-stimuli-responsive systems, which utilize a variety of stimuli to activate a single stimuli-responsive moiety (e.g., spiropyran, diarylethene, or dihydroazulene derivatives), because these studies lay the foundation for the design of systems containing more than one independently controlled fragment. As a next step, we overview the emerging field focusing on systems which are composed of more than one unique stimuli-responsive unit that can respond to independent stimuli, including distinct excitation wavelengths, or a combination of light, heat, pH, potential, or ionic strength. Recent advances clearly demonstrate how strategic coupling of orthogonally controlled stimuli-responsive units can allow for selective modulation of a range of material properties, such as conductivity, catalytic performance, and biological activity. Thus, the highlighted studies foreshadow the emerging role of materials with orthogonally controlled properties to impact the next generation of photopharmacology, nanotechnology, optoelectronics, and biomimetics.

     
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    Free, publicly-accessible full text available March 1, 2025
  2. We study novel soliton glass frequency combs to a modified Lugiato-Lefever Equation (LLE) that include cross-phase modulation within a Fabry-Perot resonator. Soliton glasses are characterized by stable, spatially locked, phase-locked, and randomly spaced soliton pulses. 
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    Free, publicly-accessible full text available May 7, 2024
  3. Abstract

    Meeting ambitious climate targets will require deploying the full suite of mitigation options, including those that indirectly reduce greenhouse-gas (GHG) emissions. Healthy diets have sustainability co-benefits by directly reducing livestock emissions as well as indirectly reducing land use emissions. Increased crop productivity could indirectly avoid emissions by reducing cropland area. However, there is disagreement on the sustainability of proposed healthy U.S. diets and a lack of clarity on how long-term sustainability benefits may change in response to shifts in the livestock sector. Here, we explore the GHG emissions impacts of seven scenarios that vary U.S. crop yields and healthier diets in the U.S. and overseas. We also examine how impacts vary across assumptions of future ruminant livestock productivity and ruminant stocking density in the U.S. We employ two complementary land use models—the US FABLE Calculator, an agricultural and forestry sector accounting model with high agricultural commodity representation, and GLOBIOM, a spatially explicit partial equilibrium optimization model for global land use systems. Results suggest that healthier U.S. diets that follow the Dietary Guidelines for Americans reduce agricultural and land use greenhouse gas emissions by 25–57% (approx 120–310 MtCO2e/y) and pastureland area by 28–38%. The potential emissions and land sparing benefits of U.S. agricultural productivity growth are modest within the U.S. due to the increasing comparative advantage of U.S. crops. Our findings suggest that healthy U.S. diets can significantly contribute toward meeting U.S. long-term climate goals for the land use sectors.

     
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  4. Abstract

    The forthcoming generation of materials, including artificial muscles, recyclable and healable systems, photochromic heterogeneous catalysts, or tailorable supercapacitors, relies on the fundamental concept of rapid switching between two or more discrete forms in the solid state. Herein, we report a breakthrough in the “speed limit” of photochromic molecules on the example of sterically-demanding spiropyran derivatives through their integration within solvent-free confined space, allowing for engineering of the photoresponsive moiety environment and tailoring their photoisomerization rates. The presented conceptual approach realized through construction of the spiropyran environment results in ~1000 times switching enhancement even in the solid state compared to its behavior in solution, setting a record in the field of photochromic compounds. Moreover, integration of two distinct photochromic moieties in the same framework provided access to a dynamic range of rates as well as complementary switching in the material’s optical profile, uncovering a previously inaccessible pathway for interstate rapid photoisomerization.

     
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  5. Abstract

    Die Fortschritte, die in den letzten fünf Jahren auf dem Gebiet der Stimuli‐reaktiven Katalyse erzielt wurden, mit dem Schwerpunkt auf neuen, kürzlich erschienenen Richtungen und Anwendungen, werden dargestellt. Diskutiert werden metallfreie Katalysatoren und metallorganische Komplexe sowie biomimetische Systeme und erweiterte Strukturen, die eine schaltbare katalytische Reaktivität für eine Vielzahl von organischen Reaktionen aufweisen. Lichtaktivierte Systeme, die aus photochromen Molekülen bestehen, welche in der Lage sind, Reaktionsgeschwindigkeit, Ausbeute oder Enantioselektivität auf Grundlage der geometrischen und elektronischen Veränderungen im Zusammenhang mit der Photoisomerisierung zu modulieren, stehen im Mittelpunkt der ausführlichen Diskussion. Alternative Stimuli wie pH‐Wert und Temperatur, die entweder allein oder in Kombination mit Licht angewendet werden können, werden ebenfalls behandelt. Die jüngsten Fortschritte zeigen deutlich, dass die Möglichkeit, das Verhalten eines Katalysators durch einen externen Stimulus fein abzustimmen, ein leistungsfähiges Instrument ist, das die Landschaft der nachhaltigen Chemie verändern könnte.

     
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  6. Abstract

    The advances made in the field of stimuli‐responsive catalysis during the last five years with a focus on the novel recently‐emerged directions and applications have been surveyed. Metal‐free catalysts and organometallic complexes, as well as biomimetic systems and extended structures, which display switchable catalytic activity for a variety of organic transformations, are discussed. Light‐activated systems comprised of photochromic molecules capable of modulating reaction rate, yield, or enantioselectivity based on geometric and electronic changes associated with photoisomerization are the focus of the detailed discussion. Alternative stimuli, including pH and temperature, which could be applied either alone or in combination with light, are also addressed. Recent advances clearly demonstrate that the capability to finely tune catalyst behavior via an external stimulus is a powerful tool that could alter the landscape of sustainable chemistry.

     
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  7. Abstract

    Significant advances in computational ethology have allowed the quantification of behaviour in unprecedented detail. Tracking animals in social groups, however, remains challenging as most existing methods can either capture pose or robustly retain individual identity over time but not both.

    To capture finely resolved behaviours while maintaining individual identity, we built NAPS (NAPS is ArUco Plus SLEAP), a hybrid tracking framework that combines state‐of‐the‐art, deep learning‐based methods for pose estimation (SLEAP) with unique markers for identity persistence (ArUco). We show that this framework allows the exploration of the social dynamics of the common eastern bumblebee (Bombus impatiens).

    We provide a stand‐alone Python package for implementing this framework along with detailed documentation to allow for easy utilization and expansion. We show that NAPS can scale to long timescale experiments at a high frame rate and that it enables the investigation of detailed behavioural variation within individuals in a group.

    Expanding the toolkit for capturing the constituent behaviours of social groups is essential for understanding the structure and dynamics of social networks. NAPS provides a key tool for capturing these behaviours and can provide critical data for understanding how individual variation influences collective dynamics.

     
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  8. Malik, Harmit S. (Ed.)
    Comparative genomics has enabled the identification of genes that potentially evolved de novo from non-coding sequences. Many such genes are expressed in male reproductive tissues, but their functions remain poorly understood. To address this, we conducted a functional genetic screen of over 40 putative de novo genes with testis-enriched expression in Drosophila melanogaster and identified one gene, atlas , required for male fertility. Detailed genetic and cytological analyses showed that atlas is required for proper chromatin condensation during the final stages of spermatogenesis. Atlas protein is expressed in spermatid nuclei and facilitates the transition from histone- to protamine-based chromatin packaging. Complementary evolutionary analyses revealed the complex evolutionary history of atlas . The protein-coding portion of the gene likely arose at the base of the Drosophila genus on the X chromosome but was unlikely to be essential, as it was then lost in several independent lineages. Within the last ~15 million years, however, the gene moved to an autosome, where it fused with a conserved non-coding RNA and evolved a non-redundant role in male fertility. Altogether, this study provides insight into the integration of novel genes into biological processes, the links between genomic innovation and functional evolution, and the genetic control of a fundamental developmental process, gametogenesis. 
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