skip to main content


Search for: All records

Creators/Authors contains: "Lucas, R."

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. Free, publicly-accessible full text available October 16, 2024
  2. Convergent local adaptation offers a glimpse into the role of constraint and stochasticity in adaptive evolution, in particular the extent to which similar genetic mechanisms drive adaptation to common selective forces. Here, we investigated the genomics of local adaptation in two nonsister woodpeckers that are codistributed across an entire continent and exhibit remarkably convergent patterns of geographic variation. We sequenced the genomes of 140 individuals of Downy (Dryobates pubescens) and Hairy (Dryobates villosus) woodpeckers and used a suite of genomic approaches to identify loci under selection. We showed evidence that convergent genes have been targeted by selection in response to shared environmental pressures, such as temperature and precipitation. Among candidates, we found multiple genes putatively linked to key phenotypic adaptations to climate, including differences in body size (e.g., IGFPB) and plumage (e.g., MREG). These results are consistent with genetic constraints limiting the pathways of adaptation to broad climatic gradients, even after genetic backgrounds diverge. 
    more » « less
    Free, publicly-accessible full text available May 19, 2024
  3. Abstract

    Observations from a granitic watershed within a Mediterranean climate reveal the hydrologic and critical zone functioning of a perennial stream headwater and its upslope contributing area within a meadow system in the Sierra Nevada, California. Chemical analysis (diagnostic tools of mixing models, end member mixing analysis, tritium, etc.) and physical data (stream stage, piezometers, soil water, snowpack, etc.) indicate there are two primary pathways of water input into a headwater stream sourced from a mountain meadow. One input is a shallower and younger subsurface pathway with water that resembles snowpack chemistry, and the other a deeper and older subsurface pathway with water that reflects the chemistry of the groundwater derived from the contributing hillslopes. Multi‐year observations reveal that regardless of snowpack amount, during the period of peak hillslope infiltration, shallow and deep pathways in the hillslope behave similarly to initiate headwater streams. However, during summer dry periods, similarities in active pathways within the meadow center are not maintained between high and low snowpack years. With less snow, perennial groundwater discharge within the meadow center is eliminated, becoming only a seasonal source at the meadow's outlet. At the meadow's edge, geophysically observed downslope thinning in saprolite thickness creates reduced lateral transmissivity and initiation points for headwater streams via enhanced groundwater discharge of upslope water. Combined, these findings suggest how loss of snowpack and critical zone structure can together mediate hydrologic function in a wet meadow system in a Mediterranean climate. Creating new understanding about the stability of hydraulic functioning in headwater wet‐meadow systems under a changing climate.

     
    more » « less
  4. Abstract

    The enhanced properties of nanomaterials make them attractive for advanced high‐performance materials, but their role in promoting toughness has been unclear. Fabrication challenges often prevent the proper organization of nanomaterial constituents, and inadequate testing methods have led to a poor knowledge of toughness at small scales. In this work, the individual roles of nanomaterials and nanoarchitecture on toughness are quantified by creating lightweight materials made from helicoidal polymeric nanofibers (nano‐Bouligand). Unidirectional ( = 0°) and nano‐Bouligand beams ( = 2°–90°) are fabricated using two‐photon lithography and are designed in a micro‐single edge notch bend (µ‐SENB) configuration with relative densities between 48% and 81%. Experiments demonstrate two unique toughening mechanisms. First, size‐enhanced ductility of nanoconfined polymer fibers increases specific fracture energy by 70% in the 0° unidirectional beams. Second, nanoscale stiffness heterogeneity created via inter‐layer fiber twisting impedes crack growth and improves absolute fracture energy dissipation by 48% in high‐density nano‐Bouligand materials. This demonstration of size‐enhanced ductility and nanoscale heterogeneity as coexisting toughening mechanisms reveals the capacity for nanoengineered materials to greatly improve mechanical resilience in a new generation of advanced materials.

     
    more » « less
  5. Abstract Background Wound healing is one of the defining features of life and is seen not only in tissues but also within individual cells. Understanding wound response at the single-cell level is critical for determining fundamental cellular functions needed for cell repair and survival. This understanding could also enable the engineering of single-cell wound repair strategies in emerging synthetic cell research. One approach is to examine and adapt self-repair mechanisms from a living system that already demonstrates robust capacity to heal from large wounds. Towards this end, Stentor coeruleus , a single-celled free-living ciliate protozoan, is a unique model because of its robust wound healing capacity. This capacity allows one to perturb the wounding conditions and measure their effect on the repair process without immediately causing cell death, thereby providing a robust platform for probing the self-repair mechanism. Results Here we used a microfluidic guillotine and a fluorescence-based assay to probe the timescales of wound repair and of mechanical modes of wound response in Stentor . We found that Stentor requires ~ 100–1000 s to close bisection wounds, depending on the severity of the wound. This corresponds to a healing rate of ~ 8–80 μm 2 /s, faster than most other single cells reported in the literature. Further, we characterized three distinct mechanical modes of wound response in Stentor : contraction, cytoplasm retrieval, and twisting/pulling. Using chemical perturbations, active cilia were found to be important for only the twisting/pulling mode. Contraction of myonemes, a major contractile fiber in Stentor , was surprisingly not important for the contraction mode and was of low importance for the others. Conclusions While events local to the wound site have been the focus of many single-cell wound repair studies, our results suggest that large-scale mechanical behaviors may be of greater importance to single-cell wound repair than previously thought. The work here advances our understanding of the wound response in Stentor and will lay the foundation for further investigations into the underlying components and molecular mechanisms involved. 
    more » « less
  6. Abstract

    Herein, phase transitions of a class of thermally-responsive polymers, namely a homopolymer, diblock, and triblock copolymer, were studied to gain mechanistic insight into nanoscale assembly dynamics via variable temperature liquid-cell transmission electron microscopy (VT-LCTEM) correlated with variable temperature small angle X-ray scattering (VT-SAXS). We study thermoresponsive poly(diethylene glycol methyl ether methacrylate) (PDEGMA)-based block copolymers and mitigate sample damage by screening electron flux and solvent conditions during LCTEM and by evaluating polymer survival viapost-mortemmatrix-assisted laser desorption/ionization imaging mass spectrometry (MALDI-IMS). Our multimodal approach, utilizing VT-LCTEM with MS validation and VT-SAXS, is generalizable across polymeric systems and can be used to directly image solvated nanoscale structures and thermally-induced transitions. Our strategy of correlating VT-SAXS with VT-LCTEM provided direct insight into transient nanoscale intermediates formed during the thermally-triggered morphological transformation of a PDEGMA-based triblock. Notably, we observed the temperature-triggered formation and slow relaxation of core-shell particles with complex microphase separation in the core by both VT-SAXS and VT-LCTEM.

     
    more » « less