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Various technologies and strategies have been proposed to decarbonize the chemical industry. Assessing the decarbonization, environmental, and economic implications of these technologies and strategies is critical to identifying pathways to a more sustainable industrial future. This study reviews recent advancements and integration of systems analysis models, including process analysis, material flow analysis, life cycle assessment, techno-economic analysis, and machine learning. These models are categorized based on analytical methods and application scales (i.e., micro-, meso-, and macroscale) for promising decarbonization technologies (e.g., carbon capture, storage, and utilization, biomass feedstock, and electrification) and circular economy strategies. Incorporating forward-looking, data-driven approaches into existing models allows for optimizing complex industrial systems and assessing future impacts. Although advances in industrial ecology–, economic-, and planetary boundary–based modeling support a more holistic systems-level assessment, more effects are needed to consider impacts on ecosystems. Effective applications of these advanced, integrated models require cross-disciplinary collaborations across chemical engineering, industrial ecology, and economics.

Expected final online publication date for the Annual Review of Chemical and Biomolecular Engineering , Volume 15 is June 2024. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.

 

Here we investigate possible carryover effects of experimentally increased incubation temperatures for postnatal growth, metabolism, and parental care within and among 6 north temperate and one tropical songbird species. Increased temperatures during embryonic development consistently caused higher postnatal resting metabolism compared to control nests, among but not within the 7 species studied. The effects of the experiment on growth were species specific and depended on the morphometric considered. Size before the fledge date was positively correlated with feeding rate, and metabolism was lower in larger broods. Our experiment did not elicit changes in parental food delivery rates or brooding effort during the postnatal stage, and higher brooding effort was associated with nestlings of smaller mass and faster metabolism independently from treatment. Consequently, parental care seemed unlikely to be the cause of the differences in growth rates between treatments. Instead, physiological mechanisms triggered by our heating treatment appear to be responsible for the observed variation in growth. These intrinsic changes unmatched by adjustments in parental effort may contribute to longer-term consequences for individual quality and survival that deserve further attention.

 

Many tropical species show declining populations. The pantropical order Trogoniformes has 76% of its species ranked as declining, reflecting a worldwide problem. Here, we report on the reproductive ecology and life history traits of the declining and near‐threatened old world Whitehead's Trogon (Harpactes whiteheadi), the declining new world Collared Trogon (Trogon collaris), and the stable Masked Trogon (T. personatus). We also reviewed the literature on reproductive ecology and life history traits of trogons to assess possible commonalities that might help explain population declines. We found that the declining Whitehead's and Collared Trogons had reasonable nest success (32% and 25%, respectively), while the stable Masked Trogon had poor reproductive success (9%), all contrary to population trends. However, the limited literature data suggested that poor reproductive success may be common among trogons, which may contribute to population declines. Parents fed young at a low rate and had long on‐bouts for incubation and nestling warming that reduced activity at the nest, as favored by high nest predation risk over evolutionary time. We found that young fledged from the nest with poorly developed wings, as also favored by high nest predation risk. Evolved nestling periods among trogon species suggests that poor wing development is likely common. Wing development has been shown to affect juvenile survival after leaving the nest. The poor wing development may be an important contributor to population declines that deserves more attention. Evolved life history traits are important to recognize as creating population vulnerabilities in a changing world.

 

Using sequences from 2,615 ultraconserved element (UCE) loci and multiple methodologies we inferred phylogenies for the largest genetic data set of New World bats in the genus Myotis to date. The resulting phylogenetic trees were populated with short branch lengths and widespread conflict, hallmarks consistent with rapid adaptive radiations. The degree of conflict observed in Myotis has likely contributed to difficulties disentangling deeper evolutionary relationships. Unlike earlier phylogenies based on 1 to 2 gene sequences, this UCE data set places M. brandtii outside the New World clades. Introgression testing of a small subset of our samples revealed evidence of historical but not contemporary gene flow, suggesting that hybridization occurs less frequently in the Neotropics than the Nearctic. We identified several instances of cryptic lineages within described species as well as several instances of potential taxonomic oversplitting. Evidence from Central and South American localities suggests that diversity in those regions is not fully characterized. In light of the accumulated evidence of the evolutionary complexity in Myotis and our survey of the taxonomic implications from our phylogenies, it is apparent that the definition of species and regime of species delimitation need to be reevaluated for Myotis. This will require substantial collaboration and sample sharing between geneticists and taxonomists to build a system that is both robust and applicable in a genus as diverse as Myotis.

 

HorologionValentine, one of the rarest and most enigmatic carabid beetle genera in the world, was until now known only from the holotype ofHorologion speokoitesValentine, discovered in 1931 in a small cave in West Virginia. A single specimen of a new species from Virginia was collected in 1991, but overlooked until 2018. DNA sequence data from specimens of this new species,Horologion hubbardisp. nov., collected in 2022 and 2023, as well as a critical examination of the external morphology of both species, allow us to confidently placeHorologionin the supertribe Trechitae, within a clade containing Bembidarenini and Trechini. A more specific placement as sister to the Gondwanan Bembidarenini is supported by DNA sequence data. Previous hypotheses placingHorologionin or near the tribes Anillini, Tachyini, Trechini, Patrobini, and Psydrini are rejected. The existence of two species ofHorologionon opposite sides of the high mountains of the middle Appalachians suggests that these mountains are where the ancestralHorologionpopulations dispersed from, and predicts the discovery of additional populations and species. All specimens ofH. hubbardiwere collected in or near drip pools, and most were found dead, suggesting that the terrestrial epikarst, rather than caves, is the true habitat ofHorologion, which explains their extreme rarity since epikarst has not been directly sampled. We recognize the tribe Horologionini, a relict lineage without any close relatives known in the Northern Hemisphere, and an important part of Appalachian biodiversity.

 

Real-world computers have operational constraints that cause nonzero entropy production (EP). In particular, almost all real-world computers are ‘periodic’, iteratively undergoing the same physical process; and ‘local’, in that subsystems evolve whilst physically decoupled from the rest of the computer. These constraints are so universal because decomposing a complex computation into small, iterative calculations is what makes computers so powerful. We first derive the nonzero EP caused by the locality and periodicity constraints for deterministic finite automata (DFA), a foundational system of computer science theory. We then relate this minimal EP to the computational characteristics of the DFA. We thus divide the languages recognised by DFA into two classes: those that can be recognised with zero EP, and those that necessarily have non-zero EP. We also demonstrate the thermodynamic advantages of implementing a DFA with a physical process that is agnostic about the inputs that it processes.

 

After successfully diversifying during the Paleocene, the descendants of the first wave of mammals that survived the end‐Cretaceous mass extinction waned throughout the Eocene. Competition with modern crown clades and intense climate fluctuations may have been part of the factors leading to the extinction of these archaic groups. Why these taxa went extinct has rarely been studied from the perspective of the nervous system. Here, we describe the first virtual endocasts for the archaic order Tillodontia. Three species from the middle Eocene of North America were analyzed: Trogosus hillsii, Trogosus grangeri, and Trogosus castoridens. We made morphological comparisons with the plaster endocast of another tillodont,Tillodon fodiens, as well as groups potentially related to Tillodontia: Pantodonta, Arctocyonidae, and Cimolesta. Trogosus shows very little inter‐specific variation with the only potential difference being related to the fusion of the optic canal and sphenorbital fissure. Many ancestral features are displayed by Trogosus, including an exposed midbrain, small neocortex, orbitotemporal canal ventral to rhinal fissure, and a broad circular fissure. Potential characteristics that could unite Tillodontia with Pantodonta, and Arctocyonidae are the posterior position of cranial nerve V3 exit in relation to the cerebrum and the low degree of development of the subarcuate fossa. The presence of large olfactory bulbs and a relatively small neocortex are consistent with a terrestrial lifestyle. A relatively small neocortex may have put Trogosus at risk when competing with artiodactyls for potentially similar resources and avoiding predation from archaic carnivorans, both of which are known to have had larger relative brain and neocortex sizes in the Eocene. These factors may have possibly exacerbated the extinction of Tillodontia, which showed highly specialized morphologies despite the increase in climate fluctuations throughout the Eocene, before disappearing during the middle Eocene. 

Personalization of a biomechanistic model of prostate cancer with mpMRI data enables the prediction of tumor progression, thereby showing promise to guide clinical decision-making during AS for each individual patient.

 

The Skutch (1949) Hypothesis that nest predation risk constrains parental nest activity has important implications for the evolution of parental care strategies, but the required conditions for the hypothesis to operate have been questioned. We found the necessary conditions existed in a montane tropical bird community where 95.4% of predation events (n = 456) occurred during daylight hours and almost all predators (n = 224) were visually oriented. Moreover, incubation strategies for 21 passerine species were explained by nest predation rates as proposed by the Skutch Hypothesis. Hourly rates of visits to the nest were lower among species with higher nest predation rates, and achieved in part by longer on- and off-bouts. Incubation attentiveness (percent of time incubating) does not necessarily affect parental nest activity and was not related to nest predation rates. Nest predation rates were greater in enclosed- than open-nesting species, counter to long-standing views. Moreover, nest predation was usually higher in the nestling period when parents were more actively visiting nests than during incubation for enclosed- but not open-nesting species. This increase in nest predation in the nestling period for enclosed-nesting species might indicate proximate predation responses to parental nest activity that underlie the evolutionary patterns. Adult mortality also can exert selection on evolved strategies. Following life history theory, annual adult mortality probability explained residual variation in incubation behaviors, while accounting for nest predation, with longer-lived species exhibiting lower nest activity and attentiveness. Ultimately, the conditions for the Skutch Hypothesis were clear and evolved behaviors suggest an important influence of natural selection by nest predation in this montane tropical bird community. At the same time, different patterns of nest predation between open- and enclosed-nesting species emphasize a need for further research into how parental nest activity interacts with nest type to affect predator detection of nests.