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  1. Abstract

    Trace element concentrations in abyssal peridotite olivine provide insights into the formation and evolution of the oceanic lithosphere. We present olivine trace element compositions (Al, Ca, Ti, V, Cr, Mn, Co, Ni, Zn, Y, Yb) from abyssal peridotites to investigate partial melting, melt–rock interaction, and subsolidus cooling at mid-ocean ridges and intra-oceanic forearcs. We targeted 44 peridotites from fast (Hess Deep, East Pacific Rise) and ultraslow (Gakkel and Southwest Indian Ridges) spreading ridges and the Tonga trench, including 5 peridotites that contain melt veins. We found that the abundances of Ti, Mn, Co, and Zn increase, while Ni decreases in melt-veined samples relative to unveined samples, suggesting that these elements are useful tracers of melt infiltration. The abundances of Al, Ca, Cr, and V in olivine are temperature sensitive. Thermometers utilizing Al and Ca in olivine indicate temperatures of 650–1000 °C, with variations corresponding to the contrasting cooling rates the peridotites experienced in different tectonic environments. Finally, we demonstrate with a two-stage model that olivine Y and Yb abundances reflect both partial melting and subsolidus re-equilibration. Samples that record lower Al- and Ca-in-olivine temperatures experienced higher extents of diffusive Y and Yb loss during cooling. Altogether, we demonstrate that olivine trace elements document both high-temperature melting and melt–rock interaction events, as well as subsolidus cooling related to their exhumation and emplacement onto the seafloor. This makes them useful tools to study processes associated with seafloor spreading and mid-ocean ridge tectonics.

     
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  2. The strength of lithospheric plates is a central component of plate tectonics, governed by brittle processes in the shallow portion of the plate and ductile behavior in the deeper portion. We review experimental constraints on ductile deformation of olivine, the main mineral in the upper mantle and thus the lithosphere. Olivine deforms by four major mechanisms: low-temperature plasticity, dislocation creep, dislocation-accommodated grain-boundary sliding (GBS), and diffusion-accommodated grain-boundary sliding (diffusion creep). Deformation in most of the lithosphere is dominated by GBS, except in shear zones—in which diffusion creep dominates—and in the brittle-ductile transition—in which low-temperature plasticity may dominate. We find that observations from naturally deformed rocks are consistent with extrapolation of the experimentally constrained olivine flow laws to geological conditions but that geophysical observations predict a weaker lithosphere. The causes of this discrepancy are unresolved but likely reside in the uncertainty surrounding processes in the brittle-ductile transition, at which the lithosphere is strongest. ▪ Ductile deformation of the lithospheric mantle is constrained by experimental data for olivine. ▪ Olivine deforms by four major mechanisms: low-temperature plasticity, dislocation creep, dislocation-accommodated grain-boundary sliding, and diffusion creep. ▪ Observations of naturally deformed rocks are consistent with extrapolation of olivine flow laws from experimental conditions. ▪ Experiments predict stronger lithosphere than geophysical observations, likely due to gaps in constraints on deformation in the brittle-ductile transition. 
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    Free, publicly-accessible full text available May 31, 2024
  3. Warren, Jessica (Ed.)
    Abstract The number of tRNAs encoded in plant mitochondrial genomes varies considerably. Ongoing loss of bacterial-like mitochondrial tRNA genes in many lineages necessitates the import of nuclear-encoded counterparts that share little sequence similarity. Because tRNAs are involved in highly specific molecular interactions, this replacement process raises questions about the identity and trafficking of enzymes necessary for the maturation and function of newly imported tRNAs. In particular, the aminoacyl-tRNA synthetases (aaRSs) that charge tRNAs are usually divided into distinct classes that specialize on either organellar (mitochondrial and plastid) or nuclear-encoded (cytosolic) tRNAs. Here, we investigate the evolution of aaRS subcellular localization in a plant lineage (Sileneae) that has experienced extensive and rapid mitochondrial tRNA loss. By analyzing full-length mRNA transcripts (PacBio Iso-Seq), we found predicted retargeting of many ancestrally cytosolic aaRSs to the mitochondrion and confirmed these results with colocalization microscopy assays. However, we also found cases where aaRS localization does not appear to change despite functional tRNA replacement, suggesting evolution of novel interactions and charging relationships. Therefore, the history of repeated tRNA replacement in Sileneae mitochondria reveals that differing constraints on tRNA/aaRS interactions may determine which of these alternative coevolutionary paths is used to maintain organellar translation in plant cells. 
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    Free, publicly-accessible full text available July 18, 2024
  4. Archibald, John (Ed.)
    Abstract

    Eukaryotes maintain separate protein translation systems for nuclear and organellar genes, including distinct sets of tRNAs and aminoacyl-tRNA synthetases (aaRSs). In animals, mitochondrial-targeted aaRSs are expressed at lower levels and are less conserved in sequence than cytosolic aaRSs involved in translation of nuclear mRNAs, likely reflecting lower translational demands in mitochondria. In plants, translation is further complicated by the presence of plastids, which share most aaRSs with mitochondria. In addition, plant mitochondrial tRNA pools have a dynamic history of gene loss and functional replacement by tRNAs from other compartments. To investigate the consequences of these distinctive features of translation in plants, we analyzed sequence evolution in angiosperm aaRSs. In contrast to previously studied eukaryotic systems, we found that plant organellar and cytosolic aaRSs exhibit only a small difference in expression levels, and organellar aaRSs are slightly more conserved than cytosolic aaRSs. We hypothesize that these patterns result from high translational demands associated with photosynthesis in mature chloroplasts. We also investigated aaRS evolution in Sileneae, an angiosperm lineage with extensive mitochondrial tRNA replacement and aaRS retargeting. We predicted positive selection for changes in aaRS sequence resulting from these recent changes in subcellular localization and tRNA substrates but found little evidence for accelerated sequence divergence. Overall, the complex tripartite translation system in plant cells appears to have imposed more constraints on the long-term evolutionary rates of organellar aaRSs compared with other eukaryotic lineages, and plant aaRS protein sequences appear largely robust to more recent perturbations in subcellular localization and tRNA interactions.

     
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    Free, publicly-accessible full text available April 1, 2024
  5. Zhang, George (Ed.)
    Abstract There is remarkable variation in the rate at which genetic incompatibilities in molecular interactions accumulate. In some cases, minor changes—even single-nucleotide substitutions—create major incompatibilities when hybridization forces new variants to function in a novel genetic background from an isolated population. In other cases, genes or even entire functional pathways can be horizontally transferred between anciently divergent evolutionary lineages that span the tree of life with little evidence of incompatibilities. In this review, we explore whether there are general principles that can explain why certain genes are prone to incompatibilities while others maintain interchangeability. We summarize evidence pointing to four genetic features that may contribute to greater resistance to functional replacement: (1) function in multisubunit enzyme complexes and protein–protein interactions, (2) sensitivity to changes in gene dosage, (3) rapid rate of sequence evolution, and (4) overall importance to cell viability, which creates sensitivity to small perturbations in molecular function. We discuss the relative levels of support for these different hypotheses and lay out future directions that may help explain the striking contrasts in patterns of incompatibility and interchangeability throughout the history of molecular evolution. 
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  6. Abstract

    The effect of small concentrations of intracrystalline water on the strength of olivine is significant at asthenospheric temperatures but is poorly constrained at lower temperatures applicable to the shallow lithosphere. We examined the effect of water on the yield stress of olivine during low‐temperature plasticity using room‐temperature Berkovich nanoindentation. The presence of water in olivine (1,600 ppm H/Si) does not affect hardness or yield stress relative to dry olivine (≤40 ppm H/Si) outside of uncertainty but may slightly reduce Young’s modulus. Differences between water‐bearing and dry crystals in similar orientations were minor compared to differences between dry crystals in different orientations. These observations suggest water content does not affect the strength of olivine at low homologous temperatures. Thus, intracrystalline water does not play a role in olivine deformation at these temperatures, implying that water does not lead to weakening in the coldest portions of the mantle.

     
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  9. Hydrogen is a rapidly diffusing monovalent cation in nominally anhydrous minerals (NAMs, such as olivine, orthopyroxene, and clinopyroxene), which is potentially re-equilibrated during silicate melt-rock and aqueous fluid-rock interactions in massif and abyssal peridotites. We apply a 3D numerical diffusion modeling technique to provide first-order timescales of complete hydrogen re-equilibration in olivine, clinopyroxene, and orthopyroxene over the temperature range 600-1200°C. Model crystals are 1-3 mm along the c-axis and utilize H+ diffusion coefficients appropriate for Fe-bearing systems. Two sets of models were run with different boundary compositions: 1) “low-H models” are constrained by mineral-melt equilibrium partitioning with a basaltic melt that has 0.75 wt% H2O and 2) “high-H models,” which utilize the upper end of the estimated range of mantle water solubility for each phase. Both sets of models yield re-equilibration timescales that are identical and are fast for all phases at a given temperature. These timescales have strong log-linear trends as a function of temperature (R2 from 0.97 to 0.99) that can be used to calculate expected re-equilibration time at a given temperature and grain size. At the high end of the model temperatures (1000-1200°C), H+ completely re-equilibrates in olivine, orthopyroxene, and clinopyroxene within minutes to hours, consistent with previous studies. These short timescales indicate that xenolith NAM mantle water contents are likely to be overprinted prior to eruption. The models also resolve the decoupled water-trace element relationship in Southwest Indian Ridge peridotites, in which peridotite REE abundances are reproduced by partial melting models whereas the relatively high NAM H2O contents require later re-equilibration with melt. At temperatures of 600-800°C, which correspond to conditions of hydrothermal alteration of pyroxene to amphibole and talc, H+ re-equilibration typically occurs over a range of timescales spanning days to years. These durations are well within existing estimates for the duration of fluid flow in oceanic hydrothermal systems, suggesting that peridotite NAM water contents are susceptible to diffusive overprinting during higher temperature hydrothermal alteration. Thus, diffusion during aqueous fluid-rock interactions may also explain NAM H2O contents that are too high to reflect residues of melting. These relatively short timescales at low temperatures suggest that the origin of water contents measured in peridotite NAMs requires additional constraints on sample petrogenesis, including petrographic and trace element analyses. Our 3D model results also hint that H+ may diffuse appreciably during peridotite serpentinization, but diffusion coefficients at low temperature are unconstrained and additional experimental investigations are needed. 
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