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Understanding how substrate structure alters an enzyme's conformational landscape is central to catalyst design. Using single-molecule electronic sensors, we reveal how substitutions on an HDAC8 substrate modulate the enzyme's underlying catalytic dynamics. We demonstrate that a trifluoroacetyl group accelerates catalysis, while a Boc cap and an allosteric activator synergistically simplify the kinetic pathway by stabilizing productive conformations. These findings provide direct, real-time insight into how substrate-induced conformational dynamics control enzyme catalysis.more » « lessFree, publicly-accessible full text available December 9, 2026
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Hazra, Raj Shankar; Dutta, Debasmita; Khan, Md_Rakib Hasan; Tani, Sakurako; Abdullah, Chowdhury S; Remex, Naznin Sultana; Aishwarya, Richa; Islam, Tamjid; Yang, Zhongyu; Mallik, Sanku; et al (, ACS Applied Bio Materials)Free, publicly-accessible full text available May 19, 2026
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Ghosh, Pratyusha; Buhaichuk, Nataliia; Carr, Jenna; Tani, Sakurako; Hazra, Raj Shankar; Mathew, Sijo; Choi, Yongki; Quadir, Mohiuddin (, Journal of Materials Chemistry B)A synthetic biomolecular condensate (sBC) was developed using zein, a hydrophobic protein derived from plants. These particles can be used as an artifiical platform to understand the structure and function of natural protein-rich condensates.more » « less
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Design and Evaluation of Nanoscale Materials with Programmed Responsivity towards Epigenetic EnzymesRay, Priyanka; Sedigh, Abbas; Confeld, Matthew; Alhallahooly, Lina; Iduoku, Kweeni; Casañola_Martin, Gerardo Maikel; Pham‑The, Hai; Rasulev, Bakhtiyor; Choi, Yongki; Yang, Zhongyu; et al (, Journal of Materials Chemistry B)Self-assembled materials capable of modulating their assembly properties in response to specific enzymes play a pivotal role in advancing 'intelligent' encapsulation platforms for biotechnological applications. Here, we introduce a previously...more » « less
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