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Wildlife trafficking (WT), the illegal trade of wild fauna, flora, and their parts, directly threatens biodiversity and conservation of trafficked species, while also negatively impacting human health, national security, and economic development. Wildlife traffickers obfuscate their activities in plain sight, leveraging legal, large, and globally linked transportation networks. To complicate matters, defensive interdiction resources are limited, datasets are fragmented and rarely interoperable, and interventions like setting checkpoints place a burden on legal transportation. As a result, interpretable predictions of which routes wildlife traffickers are likely to take can help target defensive efforts and understand what wildlife traffickers may be considering when selecting routes. We propose a data-driven model for predicting trafficking routes on the global commercial flight network, a transportation network for which we have some historical seizure data and a specification of the possible routes that traffickers may take. While seizure data has limitations such as data bias and dependence on the deployed defensive resources, this is a first step towards predicting wildlife trafficking routes on real-world data. Our seizure data documents the planned commercial flight itinerary of trafficked and successfully interdicted wildlife. We aim to provide predictions of highly-trafficked flight paths for known origin-destination pairs with plausible explanations that illuminate how traffickers make decisions based on the presence of criminal actors, markets, and resilience systems. We propose a model that first predicts likelihoods of which commercial flights will be taken out of a given airport given input features, and then subsequently finds the highest-likelihood flight path from origin to destination using a differentiable shortest path solver, allowing us to automatically align our model’s loss with the overall goal of correctly predicting the full flight itinerary from a given source to a destination. We evaluate the proposed model’s predictions and interpretations both quantitatively and qualitatively, showing that the predicted paths are aligned with observed held-out seizures, and can be interpreted by policy-makers