What is phase in cellular clocks
Four inter-related measures of phase are described to study the phase synchronization of cellular oscillators, and computation of these measures is described and illustrated on single cell fluorescence data from the model filamentous fungus, Neurospora crassa. One of these four measures is the phase shift ϕ in a sinusoid of the form x(t) = A(cos(ωt + ϕ), where t is time. The other measures arise by creating a replica of the periodic process x(t) called the Hilbert transform x̃(t), which is 90 degrees out of phase with the original process x(t). The second phase measure is the phase angle FH(t) between the replica x̃(t) and X(t), taking values between -π and π. At extreme values the Hilbert Phase is discontinuous, and a continuous form FC(t) of the Hilbert Phase is used, measuring time on the nonnegative real axis (t). The continuous Hilbert Phase FC(t) is used to define the phase MC(t1,t0) for an experiment beginning at time t0 and ending at time t1. In that phase differences at time t0 are often of ancillary interest, the Hilbert Phase FC(t0) is subtracted from FC(t1). This difference is divided by 2π to obtain the phase MC(t1,t0) in cycles. Both the Hilbert Phase FC(t) and more »
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Publication Date:
NSF-PAR ID:
10100618
Journal Name:
The Yale journal of biology & medicine
Volume:
92
Page Range or eLocation-ID:
169-178
ISSN:
0044-0086
2. A bstract A comprehensive set of azimuthal single-spin and double-spin asymmetries in semi-inclusive leptoproduction of pions, charged kaons, protons, and antiprotons from transversely polarized protons is presented. These asymmetries include the previously published HERMES results on Collins and Sivers asymmetries, the analysis of which has been extended to include protons and antiprotons and also to an extraction in a three-dimensional kinematic binning and enlarged phase space. They are complemented by corresponding results for the remaining four single-spin and four double-spin asymmetries allowed in the one-photon-exchange approximation of the semi-inclusive deep-inelastic scattering process for target-polarization orientation perpendicular to the direction of the incoming lepton beam. Among those results, significant non-vanishing cos ( ϕ−ϕ S ) modulations provide evidence for a sizable worm-gear (II) distribution, $${g}_{1\mathrm{T}}^q\left(x,{\mathrm{p}}_T^2\right)$$ g 1 T q x p T 2 . Most of the other modulations are found to be consistent with zero with the notable exception of large sin ( ϕ S ) modulations for charged pions and K + .
5. Abstract The production of $$\pi ^{\pm }$$ π ± , $$\mathrm{K}^{\pm }$$ K ± , $$\mathrm{K}^{0}_{S}$$ K S 0 , $$\mathrm{K}^{*}(892)^{0}$$ K ∗ ( 892 ) 0 , $$\mathrm{p}$$ p , $$\phi (1020)$$ ϕ ( 1020 ) , $$\Lambda$$ Λ , $$\Xi ^{-}$$ Ξ - , $$\Omega ^{-}$$ Ω - , and their antiparticles was measured in inelastic proton–proton (pp) collisions at a center-of-mass energy of $$\sqrt{s}$$ s = 13 TeV at midrapidity ( $$|y|<0.5$$ | y | < 0.5 ) as a function of transverse momentum ( $$p_{\mathrm{T}}$$ p T ) using the ALICE detector at the CERN LHC. Furthermore, the single-particle $$p_{\mathrm{T}}$$ p T distributions of $$\mathrm{K}^{0}_{S}$$ K S 0 , $$\Lambda$$ Λ , and $$\overline{\Lambda }$$ Λ ¯ in inelastic pp collisions at $$\sqrt{s} = 7$$ s = 7  TeV are reported here for the first time. The $$p_{\mathrm{T}}$$ p T distributions are studied at midrapidity within the transverse momentum range $$0\le p_{\mathrm{T}}\le 20$$ 0 ≤ p T ≤ 20 GeV/ c , depending on the particle species. The $$p_{\mathrm{T}}$$ p T spectra, integrated yields, and particle yield ratios are discussed as a function of collision energy and compared with measurements at lower $$\sqrt{s}$$ smore »