More Like this

1. Does signal reduction imply predictive coding in models of spoken word recognition?

   https://doi.org/10.3758/s13423-021-01924-x  

   Luthra, Sahil ; Li, Monica Y. ; You, Heejo ; Brodbeck, Christian ; Magnuson, James S. ( January 2021 , Psychonomic Bulletin & Review)

   null (Ed.)

   Abstract Pervasive behavioral and neural evidence for predictive processing has led to claims that language processing depends upon predictive coding. Formally, predictive coding is a computational mechanism where only deviations from top-down expectations are passed between levels of representation. In many cognitive neuroscience studies, a reduction of signal for expected inputs is taken as being diagnostic of predictive coding. In the present work, we show that despite not explicitly implementing prediction, the TRACE model of speech perception exhibits this putative hallmark of predictive coding, with reductions in total lexical activation, total lexical feedback, and total phoneme activation when the input conforms to expectations. These findings may indicate that interactive activation is functionally equivalent or approximant to predictive coding or that caution is warranted in interpreting neural signal reduction as diagnostic of predictive coding. 

   more » « less
2. Salience of low-frequency entrainment to visual signal for classification points to predictive processing in sign language. In Proceedings of 30th Annual Computational Neuroscience Meeting: CNS*2021

   https://doi.org/10.1007/s10827-021-00801-9  

   E. Malaia, L.K. Ford ( December 2021 , Journal of Computational Neuroscience)

   Objectively differentiating patient mental states based on electrical activity, as opposed to overt behavior, is a fundamental neuroscience problem with medical applications, such as identifying patients in locked-in state vs. coma. Electroencephalography (EEG), which detects millisecond-level changes in brain activity across a range of frequencies, allows for assessment of external stimulus processing by the brain in a non-invasive manner. We applied machine learning methods to 26-channel EEG data of 24 fluent Deaf signers watching videos of sign language sentences (comprehension condition), and the same videos reversed in time (non-comprehension condition), to objectively separate vision-based high-level cognition states. While spectrotemporal parameters of the stimuli were identical in comprehension vs. non-comprehension conditions, the neural responses of participants varied based on their ability to linguistically decode visual data. We aimed to determine which subset of parameters (specific scalp regions or frequency ranges) would be necessary and sufficient for high classification accuracy of comprehension state. Optical flow, characterizing distribution of velocities of objects in an image, was calculated for each pixel of stimulus videos using MATLAB Vision toolbox. Coherence between optical flow in the stimulus and EEG neural response (per video, per participant) was then computed using canonical component analysis with NoiseTools toolbox. Peak correlations were extracted for each frequency for each electrode, participant, and video. A set of standard ML algorithms were applied to the entire dataset (26 channels, frequencies from .2 Hz to 12.4 Hz, binned in 1 Hz increments), with consistent out-of-sample 100% accuracy for frequencies in .2-1 Hz range for all regions, and above 80% accuracy for frequencies < 4 Hz. Sparse Optimal Scoring (SOS) was then applied to the EEG data to reduce the dimensionality of the features and improve model interpretability. SOS with elastic-net penalty resulted in out-of-sample classification accuracy of 98.89%. The sparsity pattern in the model indicated that frequencies between 0.2–4 Hz were primarily used in the classification, suggesting that underlying data may be group sparse. Further, SOS with group lasso penalty was applied to regional subsets of electrodes (anterior, posterior, left, right). All trials achieved greater than 97% out-of-sample classification accuracy. The sparsity patterns from the trials using 1 Hz bins over individual regions consistently indicated frequencies between 0.2–1 Hz were primarily used in the classification, with anterior and left regions performing the best with 98.89% and 99.17% classification accuracy, respectively. While the sparsity pattern may not be the unique optimal model for a given trial, the high classification accuracy indicates that these models have accurately identified common neural responses to visual linguistic stimuli. Cortical tracking of spectro-temporal change in the visual signal of sign language appears to rely on lower frequencies proportional to the N400/P600 time-domain evoked response potentials, indicating that visual language comprehension is grounded in predictive processing mechanisms. 

   more » « less
3. A roadmap to integrate astrocytes into Systems Neuroscience

   https://doi.org/10.1002/glia.23632  

   Kastanenka, Ksenia V. ; Moreno‐Bote, Rubén ; De Pittà, Maurizio ; Perea, Gertrudis ; Eraso‐Pichot, Abel ; Masgrau, Roser ; Poskanzer, Kira E. ; Galea, Elena ( May 2019 , Glia)

   Systems neuroscience is still mainly a neuronal field, despite the plethora of evidence supporting the fact that astrocytes modulate local neural circuits, networks, and complex behaviors. In this article, we sought to identify which types of studies are necessary to establish whether astrocytes, beyond their well‐documented homeostatic and metabolic functions, perform computations implementing mathematical algorithms that sub‐serve coding and higher‐brain functions. First, we reviewed Systems‐like studies that include astrocytes in order to identify computational operations that these cells may perform, using Ca²⁺transients as their encoding language. The analysis suggests that astrocytes may carry out canonical computations in a time scale of subseconds to seconds in sensory processing, neuromodulation, brain state, memory formation, fear, and complex homeostatic reflexes. Next, we propose a list of actions to gain insight into the outstanding question of which variables are encoded by such computations. The application of statistical analyses based on machine learning, such as dimensionality reduction and decoding in the context of complex behaviors, combined with connectomics of astrocyte–neuronal circuits, is, in our view, fundamental undertakings. We also discuss technical and analytical approaches to study neuronal and astrocytic populations simultaneously, and the inclusion of astrocytes in advanced modeling of neural circuits, as well as in theories currently under exploration such as predictive coding and energy‐efficient coding. Clarifying the relationship between astrocytic Ca²⁺and brain coding may represent a leap forward toward novel approaches in the study of astrocytes in health and disease.

    

   more » « less
4. Cortical encoding of melodic expectations in human temporal cortex

   https://doi.org/10.7554/eLife.51784  

   Di Liberto, Giovanni M ; Pelofi, Claire ; Bianco, Roberta ; Patel, Prachi ; Mehta, Ashesh D ; Herrero, Jose L ; de Cheveigné, Alain ; Shamma, Shihab ; Mesgarani, Nima ( March 2020 , eLife)

   Humans engagement in music rests on underlying elements such as the listeners’ cultural background and interest in music. These factors modulate how listeners anticipate musical events, a process inducing instantaneous neural responses as the music confronts these expectations. Measuring such neural correlates would represent a direct window into high-level brain processing. Here we recorded cortical signals as participants listened to Bach melodies. We assessed the relative contributions of acoustic versus melodic components of the music to the neural signal. Melodic features included information on pitch progressions and their tempo, which were extracted from a predictive model of musical structure based on Markov chains. We related the music to brain activity with temporal response functions demonstrating, for the first time, distinct cortical encoding of pitch and note-onset expectations during naturalistic music listening. This encoding was most pronounced at response latencies up to 350 ms, and in both planum temporale and Heschl’s gyrus. 

   more » « less
5. Predictive coding in balanced neural networks with noise, chaos and delays

   Kadmon, J. ; Timcheck, J. ; Ganguli, S ( December 2020 , Advances in neural information processing systems)

   null (Ed.)

   Biological neural networks face a formidable task: performing reliable computations in the face of intrinsic stochasticity in individual neurons, imprecisely specified synaptic connectivity, and nonnegligible delays in synaptic transmission. A common approach to combatting such biological heterogeneity involves averaging over large redundant networks of N neurons resulting in coding errors that decrease classically as the square root of N. Recent work demonstrated a novel mechanism whereby recurrent spiking networks could efficiently encode dynamic stimuli achieving a superclassical scaling in which coding errors decrease as 1/N. This specific mechanism involved two key ideas: predictive coding, and a tight balance, or cancellation between strong feedforward inputs and strong recurrent feedback. However, the theoretical principles governing the efficacy of balanced predictive coding and its robustness to noise, synaptic weight heterogeneity and communication delays remain poorly understood. To discover such principles, we introduce an analytically tractable model of balanced predictive coding, in which the degree of balance and the degree of weight disorder can be dissociated unlike in previous balanced network models, and we develop a mean-field theory of coding accuracy. Overall, our work provides and solves a general theoretical framework for dissecting the differential contributions neural noise, synaptic disorder, chaos, synaptic delays, and balance to the fidelity of predictive neural codes, reveals the fundamental role that balance plays in achieving superclassical scaling, and unifies previously disparate models in theoretical neuroscience. 

   more » « less