More Like this

1. Morphological and genetic data challenge species and subspecies in the Lerista microtis group (Squamata: Scincidae)

   https://doi.org/10.11646/ZOOTAXA.5437.3.2  

   FARQUHAR, JULES E; PRATES, IVAN; DOUGHTY, PAUL; RABOSKY, DANIEL L; CHAPPLE, DAVID G (April 2024, Zootaxa)

   The subspecies rank has been widely applied by taxonomists to capture infraspecific variation within the Linnaean classification system. Many subspecies described throughout the 20th century were recognised largely based on perceived variation in single morphological characters yet have since been found not to correspond to separately evolving population lineages, thus requiring synonymy or elevation to full species under lineage-based views of species. These modern lineage-based taxonomic resolutions have resulted from a combination of new molecular genetic techniques, improved geographical sampling of specimens, and more sophisticated analyses of morphological variation (e.g., statistical assessments rather than solely univariate descriptive ones). Here, we revisit the current taxonomic arrangement of species-level and subspecific taxa in the Lerista microtis (Gray) group, which is distributed along a narrow ~2000 km strip on the southern coast of Australia. From specimens of the L. microtis group, an additional species (Lerista arenicola) and two additional subspecies (L. m. intermedia and L. m. schwaneri) were described. We collected data on mensural, meristic, and colour pattern characters to explore morpho-spatial relationships among these taxa. Although our morphological analyses revealed some distinctiveness among specimens from locations assigned to each taxon, this variation is continuous along Australia’s southern coastline, assuming the form of a geographic cline rather than discrete forms. For many characters, however, spatial patterns were inconsistent with the original descriptions, particularly of the subspecies. Moreover, analysis of genome wide restriction-associated DNA loci revealed multiple instances of paraphyly among taxa, with phylogenetic clustering of specimens assigned to distinct species and subspecies. These emerging patterns provide no support for L. arenicola as a species evolving separately from L. microtis. Additionally, our findings challenge the presumed distinctiveness and coherence of the three subspecies of L. microtis. We thus synonymise L. arenicola and the L. microtis subspecies with L. microtis and provide a redescription of a single yet morphologically variable species—an arrangement that best reflects evolutionary history and the continuous nature of morphological variation across space. 

   more » « less
2. Type specimens in the molluscan collection of the Bailey-Matthews National Shell Museum, Florida, USA

   https://doi.org/10.11646/zootaxa.4951.1.1  

   LEAL, JOSÉ H. (April 2021, Zootaxa)

   null (Ed.)

   This article lists and comments on the primary and secondary types represented in the collection of the Bailey-Matthews National Shell Museum (BMSM), on Sanibel, Florida, USA. The collection includes 464 type specimens, of which 15 are holotypes, representing 149 taxa, of which 145 are species and four subspecies. The BMSM collection is fully catalogued and posted online via the Museum’s website, in addition to iDigBio and GBIF. The publication of this annotated list intends to improve on the accessibility and promote this important group of name-bearing specimens, which includes, among other cases, types originating from orphaned collections and material poorly documented in the original descriptions. Eighty-two types were selected for illustration, and the photos of all BMSM types are available as part of the BMSM online collection catalog. 

   more » « less
3. Phylogenomic Delimitation of Morphologically Cryptic Species in Globetrotting Nylanderia (Hymenoptera: Formicidae) Species Complexes

   https://doi.org/10.1093/isd/ixab027  

   Williams, Jason L; Zhang, Y Miles; LaPolla, John S; Schultz, Ted R; Lucky, Andrea (January 2022, Insect Systematics and Diversity)

   Camacho, Gabriela P (Ed.)

   Abstract The ant genus Nylanderia Emery has a cosmopolitan distribution and includes 150 extant described species and subspecies, with potentially hundreds more undescribed. Global taxonomic revision has long been stalled by strong intra- and interspecific morphological variation, limited numbers of diagnostic characters, and dependence on infrequently collected male specimens for species description and identification. Taxonomy is further complicated by Nylanderia being one of the most frequently intercepted ant genera at ports of entry worldwide, and at least 15 globetrotting species have widespread and expanding ranges, making species-level diagnoses difficult. Three species complexes (‘bourbonica complex’, ‘fulva complex’, and ‘guatemalensis complex’) include globetrotting species. To elucidate the phylogenetic positions of these three complexes and delimit species boundaries within each, we used target enrichment of ultraconserved elements (UCEs) from 165 specimens representing 98 Nylanderia morphospecies worldwide. We also phased the UCEs, effectively doubling sample size and increasing population-level sampling. After recovering strong support for the monophyly of each complex, we extracted COI barcodes and SNPs from the UCE data and tested within-complex morphospecies hypotheses using three molecular delimitation methods (SODA, bPTP, and STACEY). This comparison revealed that most methods tended to over-split taxa, but results from STACEY were most consistent with our morphospecies hypotheses. Using these results, we recommend species boundaries that are conservative and most congruent across all methods. This work emphasizes the importance of integrative taxonomy for invasive species management, as globetrotting occurs independently across at least nine different lineages across Nylanderia. 

   more » « less
4. Improving Aquatic Biodiversity Estimates in Africa: Rotifers of Angola and Ghana

   https://doi.org/10.3390/d16050269  

   Smolak, Radoslav; Brown, Patrick D; Walsmith, Robert N; Ríos-Arana, Judith V; Sanful, Peter; Kalous, Lukáš; Walsh, Elizabeth J (May 2024, Diversity)

   Afrotropical inland waters are highly diverse ecosystems; however, they remain poorly studied, especially for rotifers. Here, we contributed to the knowledge of the rotifer species richness in the largely understudied African countries of Angola and Ghana. We assessed the roles of habitat type and a suite of abiotic environmental factors in determining rotifer species richness of Ghana. A total of 37 sites (Ghana 32, Angola 5) in 19 water bodies from a variety of aquatic habitat types were sampled. In Ghana, we identified 118 taxa (105 species or subspecies level, 13 identified to genus). We identified 15 taxa (13 species) in the Angola samples. For Ghana, 100 of 118 (~85%) taxa were new records for the country, of which 13 species (~11%) were also new records for Africa. Nearly all the species (~93%) were new records for Angola. Species richness was positively correlated with conductivity and reservoir habitat type and negatively with pH. Redundancy analysis (RDA), conducted at the species level for the Ghana dataset, indicated suites of species associated with latitude, longitude, temperature, TDS, or pH. We also evaluated the effect of climate on species distribution in 27 African countries by conducting a review of all reports from Africa to determine factors associated with species richness. A Spearman’s correlation confirmed a significant positive correlation between the number of rotifer species and the number of climatic regions (R = 0.53, p < 0.001) for certain countries, based on species distributions in relation to Köppen–Geiger climate regions. This fact validates the environmental heterogeneity hypothesis for African rotifers. Lastly, we predicted that rotifer species richness in Ghana, as a country with a tropical climate, could approach ~190 taxa, while in climatically heterogeneous Angola we predict ~200 taxa. This study contributes to our knowledge of rotifer biogeography and species richness patterns in Africa. 

   more » « less
5. Subfossil birds from a submerged cave in southwestern Madagascar

   Rasolonjatovo, H.A M.; Muldoon, K.M.; Ranivoharimanana, L.; Rakotoarijaona, M.; Goodman, S. M. (December 2021, Malagasy nature)

   The Mahafaly karst of southwestern Madagascar is rich with subfossil deposits. Vintany Cave (also known as Aven Cave), a submerged cave at Tsimanampesotse National Park, is the most subfossil-dense submerged cave known in the world. In particular, the cave has yielded abundant remains of birds, including some that are extinct. Among 1077 bird specimens recovered under water from the cave floor and from excavated sediments at this site, 35 different taxa were identified. Taxonomic attributions were made through comparative morphological analysis, using comparative osteological museum collections. The majority of these species still occur inside the park. Five extinct taxa were recovered from the cave, including one species of elephant bird (Aepyornithidae, Mullerornis modestus), two species of giant endemic ground couas (Cuculidae, Coua cf. berthae and C. cf. primaeva), a shelduck (Alopochen sirabensis, Anatidae), and a lapwing (Charadriidae, Vanellus madagascariensis). Two extant taxa, Haliaeetus vociferoides (Accipitridae) and Threskiornis bernieri (Threskiornithidae) are locally extirpated, but exist at other localities in Madagascar. Remains of Greater Vasa Parrots (Psittaculidae, Coracopsis vasa) are predominant. Some of the identified extinct and locally extirpated taxa from Vintany Cave have an aquatic dependence, most specifically freshwater, that suggests that there has been environmental modification such as reduction of the important water sources in the region of Tsimanampesotse, and wetter conditions in the area in the past. 

   more » « less