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1. Trace elements in mollusc shells and benthic foraminifera

   Brooks, HL ; Cruz-Uribe, AM ; Stone, JS ( May 2019 , North American Workshop on Laser Ablation 2019 Abstracts)

   Throughout the course of an organism’s life, the chemical signatures of environment, food consumption, and weather are recorded into their carbonate structures; these signatures can be directly linked to a time-resolved lifespan. Here we present trace element data from benthic foraminifera and tropical molluscs determined using an ESI NWR193UC excimer laser coupled with an Agilent 8900 triple quadrupole mass spectrometer in the MicroAnalytical Geochemistry and Isotope Characterization (MAGIC) Laboratory at the University of Maine. Benthic foraminifera are protists that live on the sea floor and produce calcite shells, progressively adding chambers. Changes in Mg/Ca in foraminifera are used as a proxy for ocean temperature. Laser ablation ICP-MS data for 18 trace elements were collected in individual growth chambers in foraminifera of the genus Uvigerina from the Bay of Plenty. Line scans were performed within thin (~10 µm) chamber walls using a spot size of 8 µm, beam energy density of 3 J/cm2, repetition rate of 12 Hz, and scan speeds of 2-3 µm/s. Concentrations were determined relative to the NIST610 glass. Ratios of Mg/Ca and other trace elements record the same range of values as those determined via bulk wet chemistry analysis of ~10 foraminifera for a given population, whichmore »suggests that LA-ICP-MS may be a viable alternative to wet chemistry. Trace element data were collected across shells of the warm-tropical mollusc species Chione subrugosa from the Ostra Base Camp area, Peru (78°37’22”W, 8°54’46”S). Previous studies of the area have suggested that a large climate transition occurred, transforming a warm water tropical bay into a desert surrounded by a coastal stand with cool waters. This area was occupied by humans at 6250-5450 radiocarbon years BP. This study examines Chione subrugosa, which were found in the living position at the fossilized Ostra Beach and are thought to have been the final living warm-tropical molluscs in the bay. Studies of modern molluscs have revealed that molluscs record massive climatic changes, such as El Niño, in their chemistry. Laser ablation provides a unique opportunity to examine chemical changes directly related to the changing coastal environment. Line scans transverse growth bands along the length of the shell, providing a high resolution record of daily variation in trace element chemistry over the lifespan of the mollusc. Eleven elements were analysed with a beam energy density of 2.4 J/cm2, repetition rate of 15 Hz, spot size of 5 x 25 µm, and a scan speed of 5 µm/s. Preliminary data suggest the preservation of yearly oscillations in trace elements, with high concentrations of La, Ce, U, and Pb during early shell growth. Continued study will examine catastrophic mollusc life events in an effort to link these with environmental climate changes over daily timescales.« less
2. Final inversion of the Midcontinent Rift during the Rigolet Phase of the Grenvillian Orogeny

   https://doi.org/10.1130/G49439.1  

   Hodgin, Eben B. ; Swanson-Hysell, Nicholas L. ; DeGraff, James M. ; Kylander-Clark, Andrew R.C. ; Schmitz, Mark D. ; Turner, Andrew C. ; Zhang, Yiming ; Stolper, Daniel A. ( February 2022 , Geology)

   Abstract Despite being a prominent continental-scale feature, the late Mesoproterozoic North American Midcontinent Rift did not result in the break-up of Laurentia, and subsequently underwent structural inversion. The timing of inversion is critical for constraining far-field effects of orogenesis and processes associated with the rift's failure. The Keweenaw fault in northern Michigan (USA) is a major thrust structure associated with rift inversion; it places ca. 1093 Ma rift volcanic rocks atop the post-rift Jacobsville Formation, which is folded in its footwall. Previous detrital zircon (DZ) U-Pb geochronology conducted by laser ablation–inductively coupled plasma–mass spectrometry (LA-ICP-MS) assigned a ca. 950 Ma maximum age to the Jacobsville Formation and led researchers to interpret its deposition and deformation as postdating the ca. 1090–980 Ma Grenvillian Orogeny. In this study, we reproduced similar DZ dates using LA-ICP-MS and then dated 19 of the youngest DZ grains using high-precision chemical abrasion–isotope dilution–thermal ionization mass spectrometry (CA-ID-TIMS). The youngest DZ dated by CA-ID-TIMS at 992.51 ± 0.64 Ma (2σ) redefines the maximum depositional age of the Jacobsville Formation and overlaps with a U-Pb LA-ICP-MS date of 985.5 ± 35.8 Ma (2σ) for late-kinematic calcite veins within the brecciated Keweenaw fault zone. Collectively, these data are interpretedmore »to constrain deposition of the Jacobsville Formation and final rift inversion to have occurred during the 1010–980 Ma Rigolet Phase of the Grenvillian Orogeny, following an earlier phase of Ottawan inversion. Far-field deformation propagated >500 km into the continental interior during the Ottawan and Rigolet phases of the Grenvillian Orogeny.« less
3. Toward Universal Photodynamic Coatings for Infection Control

   https://doi.org/10.3389/fmed.2021.657837  

   Ghareeb, C. Roland ; Peddinti, Bharadwaja S. ; Kisthardt, Samantha C. ; Scholle, Frank ; Spontak, Richard J. ; Ghiladi, Reza A. ( July 2021 , Frontiers in Medicine)

   The dual threats posed by the COVID-19 pandemic and hospital-acquired infections (HAIs) have emphasized the urgent need for self-disinfecting materials for infection control. Despite their highly potent antimicrobial activity, the adoption of photoactive materials to reduce infection transmission in hospitals and related healthcare facilities has been severely hampered by the lack of scalable and cost-effective manufacturing, in which case high-volume production methods for fabricating aPDI-based materials are needed. To address this issue here, we examined the antimicrobial efficacy of a simple bicomponent spray coating composed of the commercially-available UV-photocrosslinkable polymer N -methyl-4(4'-formyl-styryl)pyridinium methosulfate acetal poly(vinyl alcohol) (SbQ-PVA) and one of three aPDI photosensitizers (PSs): zinc-tetra(4- N -methylpyridyl)porphine (ZnTMPyP 4+ ), methylene blue (MB), and Rose Bengal (RB). We applied these photodynamic coatings, collectively termed SbQ-PVA/PS, to a variety of commercially available materials. Scanning electron microscopy (SEM) and time-of-flight secondary ion mass spectrometry (ToF-SIMS) confirmed the successful application of the coatings, while inductively coupled plasma-optical emission spectroscopy (ICP-OES) revealed a photosensitizer loading of 0.09-0.78 nmol PS/mg material. The antimicrobial efficacy of the coated materials was evaluated against methicillin-susceptible Staphylococcus aureus ATCC-29213 and human coronavirus strain HCoV-229E. Upon illumination with visible light (60 min, 400-700 nm, 65 ± 5 mW/cm 2 ),more »the coated materials inactivated S. aureus by 97-99.999% and HCoV-229E by 92-99.999%, depending on the material and PS employed. Photobleaching studies employing HCoV-229E demonstrated detection limit inactivation (99.999%) even after exposure for 4 weeks to indoor ambient room lighting. Taken together, these results demonstrate the potential for photodynamic SbQ-PVA/PS coatings to be universally applied to a wide range of materials for effectively reducing pathogen transmission.« less
4. Reconstruction, analysis, and segmentation of LA-ICP-MS imaging data using Python for the identification of sub-organ regions in tissues

   https://doi.org/10.1039/c9an02472g  

   Castellanos-García, Laura J. ; Gokhan Elci, S. ; Vachet, Richard W. ( May 2020 , The Analyst)

   Laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) imaging has been extensively used to determine the distributions of metals in biological tissues for a wide variety of applications. To be useful for identifying metal biodistributions, the acquired raw data needs to be reconstructed into a two-dimensional image. Several approaches have been developed for LA-ICP-MS image reconstruction, but less focus has been placed on software for more in-depth statistical processing of the imaging data. Yet, improved image processing can allow the biological ramifications of metal distributions in tissues to be better understood. In this work, we describe software written in Python that automatically reconstructs, analyzes, and segments images from LA-ICP-MS imaging data. Image segmentation is achieved using LA-ICP-MS signals from the biological metals Fe and Zn together with k -means clustering to automatically identify sub-organ regions in different tissues. Spatial awareness also can be incorporated into the images through a neighboring pixel evaluation that allows regions of interest to be identified that are at the limit of the LA-ICP-MS imaging resolution. The value of the described algorithms is demonstrated for LA-ICP-MS images of nanomaterial biodistributions. The developed image reconstruction and processing approach reveals that nanomaterials distribute in different sub-organ regions basedmore »on their chemical and physical properties, opening new possibilities for understanding the impact of such nanomaterials in vivo .« less
5. LA-ICP-MS and MALDI-MS image registration for correlating nanomaterial biodistributions and their biochemical effects

   https://doi.org/10.1039/d1an01783g  

   Castellanos-Garcia, Laura J. ; Sikora, Kristen N. ; Doungchawee, Jeerapat ; Vachet, Richard W. ( December 2021 , The Analyst)

   Laser ablation inductively-coupled plasma mass spectrometry (LA-ICP-MS) imaging and matrix assisted laser desorption ionization mass spectrometry imaging (MALDI-MSI) are complementary methods that measure distributions of elements and biomolecules in tissue sections. Quantitative correlations of the information provided by these two imaging modalities requires that the datasets be registered in the same coordinate system, allowing for pixel-by-pixel comparisons. We describe here a computational workflow written in Python that accomplishes this registration, even for adjacent tissue sections, with accuracies within ±50 μm. The value of this registration process is demonstrated by correlating images of tissue sections from mice injected with gold nanomaterial drug delivery systems. Quantitative correlations of the nanomaterial delivery vehicle, as detected by LA-ICP-MS imaging, with biochemical changes, as detected by MALDI-MSI, provide deeper insight into how nanomaterial delivery systems influence lipid biochemistry in tissues. Moreover, the registration process allows the more precise images associated with LA-ICP-MS imaging to be leveraged to achieve improved segmentation in MALDI-MS images, resulting in the identification of lipids that are most associated with different sub-organ regions in tissues.