More Like this

1. Population Genetics of Reproductive Genes in Haplodiploid Species

   https://doi.org/10.1093/gbe/evac070  

   Dapper, Amy L.; Slater, Garett P.; Shores, Katherynne; Harpur, Brock A. (May 2022, Genome Biology and Evolution)

   Mank, Judith (Ed.)

   Abstract Many animal species are haplodiploid: their fertilized eggs develop into diploid females and their unfertilized eggs develop into haploid males. The unique genetic features of haplodiploidy raise the prospect that these systems can be used to disentangle the population genetic consequences of haploid and diploid selection. To this end, sex-specific reproductive genes are of particular interest because, while they are shared within the same genome, they consistently experience selection in different ploidal environments. However, other features of these genes, including sex-specific expression and putative involvement in postcopulatory sexual selection, are potentially confounding factors because they may also impact the efficacy of selection asymmetrically between the sexes. Thus, to properly interpret evolutionary genomic patterns, it is necessary to generate a null expectation for the relative amount of polymorphism and divergence we expect to observe among sex-specific genes in haplodiploid species, given differences in ploidal environment, sex-limited expression, and their potential role in sexual selection. Here, we derive the theoretical expectation for the rate of evolution of sex-specific genes in haplodiploid species, under the assumption that they experience the same selective environment as genes expressed in both sexes. We find that the null expectation is that reproductive genes evolve more rapidly than constitutively expressed genes in haplodiploid genomes. However, despite the aforementioned differences, the null expectation does not differ between male- and female-specific reproductive genes, when assuming additivity. Our theoretical results provide an important baseline expectation that should be used in molecular evolution studies comparing rates of evolution among classes of genes in haplodiploid species. 

   more » « less
2. Drosophila female reproductive tract gene expression reveals coordinated mating responses and rapidly evolving tissue-specific genes

   https://doi.org/10.1093/g3journal/jkab020  

   McDonough-Goldstein, Caitlin E; Borziak, Kirill; Pitnick, Scott; Dorus, Steve (March 2021, G3 Genes|Genomes|Genetics)

   Civetta, A (Ed.)

   Abstract Sexual reproduction in internally fertilizing species requires complex coordination between female and male reproductive systems and among the diverse tissues of the female reproductive tract (FRT). Here, we report a comprehensive, tissue-specific investigation of Drosophila melanogaster FRT gene expression before and after mating. We identified expression profiles that distinguished each tissue, including major differences between tissues with glandular or primarily nonglandular epithelium. All tissues were enriched for distinct sets of genes possessing secretion signals that exhibited accelerated evolution, as might be expected for genes participating in molecular interactions between the sexes within the FRT extracellular environment. Despite robust transcriptional differences between tissues, postmating responses were dominated by coordinated transient changes indicative of an integrated systems-level functional response. This comprehensive characterization of gene expression throughout the FRT identifies putative female contributions to postcopulatory events critical to reproduction and potentially reproductive isolation, as well as the putative targets of sexual selection and conflict. 

   more » « less
3. Drosophila female reproductive glands contribute to mating plug composition and the timing of sperm ejection

   https://doi.org/10.1098/rspb.2021.2213  

   McDonough-Goldstein, Caitlin E.; Pitnick, Scott; Dorus, Steve (February 2022, Proceedings of the Royal Society B: Biological Sciences)

   Reproductive traits that influence female remating and competitive fertilization rapidly evolve in response to sexual selection and sexual conflict. One such trait, observed across diverse animal taxa, is the formation of a structural plug inside the female reproductive tract (FRT), either during or shortly after mating. In Drosophila melanogaster , male seminal fluid forms a mating plug inside the female bursa, which has been demonstrated to influence sperm entry into storage and latency of female remating. Processing of the plug, including its eventual ejection from the female's reproductive tract, influences the competitive fertilization success of her mates and is mediated by female × male genotypic interactions. However, female contributions to plug formation and processing have received limited attention. Using developmental mutants that lack glandular FRT tissues, we reveal that these tissues are essential for mating plug ejection. We further use proteomics to demonstrate that female glandular proteins, and especially proteolytic enzymes, contribute to mating plug composition and have a widespread impact on plug formation and composition. Together, these phenotypic and molecular data identify female contributions to intersexual interactions that are a potential mechanism of post-copulatory sexual selection. 

   more » « less
4. Orangutan Socio-Sexual Behavior and Sexual Conflict: Insights for Human Evolution

   Knott, CD (January 2021, 2021 European Evolution and Human Behaviour Association Meeting)

   null (Ed.)

   In this talk I reveal how recent research on great ape behavior and physiology provides new insights into the similarities we share with our closest relatives. In particular, I focus on my long-term research studying wild orangutans in Gunung Palung National Park, Indonesia for over 25 years. Orangutans are known for one of the highest rates of sexual coercion, through forced copulation, of any animal. This is coupled with another intriguing phenomenon of having two male morphs, a rare type of male bi-maturism. Females share crucial features of reproductive physiology in common with humans, such as concealed ovulation and menstrual cycle length. In this talk I explore the complexity of male and female reproductive decisions in wild orangutans and the ways that these reveal insights into the evolution of human mating systems. This includes new research from my team on the development of socio-sexual behavior in adolescent females and how the threat of forced copulation, as well possible infanticide risk, impacts female behavior and ranging patterns. I also demonstrate the success of strategies employed by females to avoid undesired sires. These results reveal that, despite high rates of forced copulation, female choice is an important feature of orangutan mating patterns. I also discuss why sexual coercion is so prevalent in orangutans and how this type of sexual selection may be much more common across animals than often recognized. I point to the need for considering comparative data on sexual conflict as we consider the evolution of human mating patterns. 

   more » « less
5. Molecular evolution of a reproductive barrier in maize and related species

   https://doi.org/10.1101/2024.12.02.626474  

   Cryan, Elli; Phinney, Garnet; Seetharam, Arun S; Evans, Matthew MS; Kellogg, Elizabeth A; Zhan, Junpeng; Meyers, Blake C; Kliebenstein, Daniel J; Ross-Ibarra, Jeffrey (December 2024, bioRxiv)

   Three cross-incompatibility loci each control a distinct reproductive barrier in both domesticated maize (Zea mays ssp. mays) and its wild teosinte relatives. These three loci, Teosinte crossing barrier1 (Tcb1), Gametophytic factor1 (Ga1), and Ga2, each play a key role in preventing hybridization between incompatible populations and are proposed to maintain the barrier between domesticated and wild subspecies. Each locus encodes both a silk-active and a matching pollen-active pectin methylesterase (PMEs). To investigate the diversity and molecular evolution of these gametophytic factor loci, we identified existing and improved models of the responsible genes in a new genome assembly of maize line P8860 that contains active versions of all three loci. We then examined fifty-two assembled genomes from seventeen species to classify haplotype diversity and identify sites under diversifying selection during the evolution of these genes. We show that Ga2, the oldest of these three loci, was duplicated to form Ga1 at least 12 million years ago. Tcb1, the youngest locus, arose as a duplicate of Ga1 before or around the time of diversification of the Zea genus. We find evidence of positive selection during evolution of the functional genes at an active site in the pollen-expressed PME and predicted surface sites in both the silk- and pollen-expressed PMEs. The most common allele at the Ga1 locus is a conserved ga1 allele (ga1-Off), which is a specific haplotype containing three full-length PME gene copies, all of which are non-coding due to conserved stop codons and are between 610 thousand and 1.5 million years old. We show that the ga1-Off allele is associated with and likely generates 24-nt siRNAs in developing pollen-producing tissue, and these siRNAs map to functional Ga1 alleles. In previously-published crosses, the ga1-Off allele was associated with reduced function of the typically dominant functional alleles for the Ga1 and Tcb1 barriers. Taken together, this seems to be an example of a type of epigenetic trans-homolog silencing known as paramutation, functioning at a locus controlling a reproductive barrier. 

   more » « less