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1. Data from: The effect of external flow on the feeding currents of sessile microorganisms

   https://doi.org/10.5061/dryad.4j0zpc88m  

   Pepper, Rachel (January 2020, Dryad)

   Microscopic sessile suspension feeders live attached to surfaces and, by consuming bacteria-sized prey and by being consumed, they form an important part of aquatic ecosystems. Their environmental impact is mediated by their feeding rate, which depends on a self-generated feeding current. The feeding rate has been hypothesized to be limited by recirculating eddies that cause the  organisms to feed from water that is depleted of food particles. However, those results considered organisms in still water, while ambient flow is often present in their natural habitats. We show, using a point-force model, that even very slow ambient flow, with speed several orders of magnitude less than that of the self-generated feeding current, is sufficient to disrupt the eddies around perpendicular suspension feeders, providing a constant supply of food-rich water. However, the feeding rate decreases in external flow at a range of non-perpendicular orientations due to the formation of recirculation structures not seen in still water. We quantify the feeding flow and observe such recirculation experimentally for the suspension feeder Vorticella convallaria in external flows typical of streams and rivers. 

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2. Data from: The effect of external flow on 3D orientation of a microscopic sessile suspension feeder, Vorticella convallaria

   https://doi.org/10.5061/dryad.7d7wm3829  

   Pepper, Rachel E; Klaassen_Van_Oorschot, Brett; Böttger, Tia (January 2023, Dryad)

   Vorticella convallaria are microscopic sessile suspension feeders that live attached to substrates in aquatic environments. They feed using a self‐generated current and help maintain the health of aquatic ecosystems and wastewater treatment facilities by consuming bacteria and detritus. Their environmental impact is mediated by their feeding rate. In ambient flow, feeding rates are highly dependent on an individual's orientation relative to the substrate and the flow. Here, we investigate how this orientation is impacted by flow speed. Furthermore, we examined whether individuals actively avoid orientations unfavorable for feeding. We exposed individuals to unidirectional laminar flow at shear rates of 0, 0.5, 1.0, and 1.5 s−1, and recorded their 3D orientation using a custom biplanar microscope. We determined that V. convallaria orientation became progressively tilted downstream as the shear rate increased, but individuals were still able to actively reorient. Additionally, at higher shear rates, individuals spent a larger fraction of their time in orientations with reduced feeding rates. Our shear rates correspond to freestream flows on the scale of mm s−1 to cm s−1 in natural environments. 

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3. The effect of external flow on 3D orientation of a microscopic sessile suspension feeder, Vorticella convallaria

   https://doi.org/10.1111/nyas.15170  

   Böttger, Tia; Klaassen_van_Oorschot, Brett; Pepper, Rachel E (July 2024, Annals of the New York Academy of Sciences)

   Abstract Vorticella convallariaare microscopic sessile suspension feeders that live attached to substrates in aquatic environments. They feed using a self‐generated current and help maintain the health of aquatic ecosystems and wastewater treatment facilities by consuming bacteria and detritus. Their environmental impact is mediated by their feeding rate. In ambient flow, feeding rates are highly dependent on an individual's orientation relative to the substrate and the flow. Here, we investigate how this orientation is impacted by flow speed. Furthermore, we examined whether individuals actively avoid orientations unfavorable for feeding. We exposed individuals to unidirectional laminar flow at shear rates of 0, 0.5, 1.0, and 1.5 s⁻¹, and recorded their 3D orientation using a custom biplanar microscope. We determined thatV. convallariaorientation became progressively tilted downstream as the shear rate increased, but individuals were still able to actively reorient. Additionally, at higher shear rates, individuals spent a larger fraction of their time in orientations with reduced feeding rates. Our shear rates correspond to freestream flows on the scale of mm s⁻¹to cm s⁻¹in natural environments. 

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4. Reconstructing the feeding ecology of Cambrian sponge reefs: the case for active suspension feeding in Archaeocyatha

   https://doi.org/10.1098/rsos.230766  

   Gibson, Brandt M.; Chipman, Max; Attanasio, Paolo; Qureshi, Zaid; Darroch, Simon A.; Rahman, Imran A.; Laflamme, Marc (November 2023, Royal Society Open Science)

   Budd, Graham E. (Ed.)

   Sponge-grade Archaeocyatha were early Cambrian biomineralizing metazoans that constructed reefs globally. Despite decades of research, many facets of archaeocyath palaeobiology remain unclear, making it difficult to reconstruct the palaeoecology of Cambrian reef ecosystems. Of specific interest is how these organisms fed; previous experimental studies have suggested that archaeocyaths functioned as passive suspension feeders relying on ambient currents to transport nutrient-rich water into their central cavities. Here, we test this hypothesis using computational fluid dynamics (CFD) simulations of digital models of select archaeocyath species. Our results demonstrate that, given a range of plausible current velocities, there was very little fluid circulation through the skeleton, suggesting obligate passive suspension feeding was unlikely. Comparing our simulation data with exhalent velocities collected from extant sponges, we infer an active suspension feeding lifestyle for archaeocyaths. The combination of active suspension feeding and biomineralization in Archaeocyatha may have facilitated the creation of modern metazoan reef ecosystems. 

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5. The Importance of Size and Location Within Gregarious Populations of Ernietta plateauensis

   https://doi.org/10.3389/feart.2021.749150  

   Gibson, Brandt M.; Darroch, Simon A.F.; Maloney, Katie M.; Laflamme, Marc (October 2021, Frontiers in Earth Science)

   null (Ed.)

   Ernietta plateauensis is a semi-infaunal macroscopic eukaryote of unknown affinities common in latest Ediacaran (∼548–539 Ma) shallow marine settings in Namibia. The discovery of in-situ assemblages of Ernietta has demonstrated that these organisms lived in aggregated populations, while studies employing computational fluid dynamics (CFD) modeling have supported the hypothesis that these organisms were likely behaving as gregarious suspension feeders, analogous to many extant invertebrate phyla in present-day marine environments. Careful census and measurement of individuals within these in-situ populations offers an opportunity to examine how their size and location within a larger population affect nutrient delivery dynamics. In this study, we build on previous work by simulating fluid flow over aggregations of Ernietta comprising individuals of disparate sizes, and additionally reconstruct a population of Ernietta preserved in-situ from Farm Hansburg, Namibia. We use a combination of stationary and time-dependent CFD to reconstruct nutrient carrying flow paths, and compare the efficiency with which nutrients are partitioned between individuals of different shapes and sizes. Our results demonstrate that smaller Ernietta experience limited recirculation within their cavities compared to larger individuals. Furthermore, in spatially-accurate distributions, reduced recirculation is limited to isolated individuals of any size, while smaller individuals found downstream of larger ones receive enhanced cavity mixing. These reconstructed flow patterns illustrate that the disadvantage associated with small size is apparently mediated by location within the overall aggregation, suggesting a complex interplay of controls on feeding efficiency. This in turn suggests that aggregations of adult Ernietta would likely have performed a ‘nursery’ function, creating localized conditions ideal for the settlement and growth of younger individuals. 

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