The systematics of humble-in-appearance brown spiders (“marronoids”), within a larger group of spiders with a modified retrolateral tibial apophysis (the RTA Clade), has long vexed arachnologists. Although not yet fully settled, recent phylogenomics has allowed the delimitation and phylogenetic relationships of families within marronoids to come into focus. Understanding relationships within these families still awaits more comprehensive generic-level sampling, as the majority of described marronoid genera remain unsampled for phylogenomic data. Here we conduct such an analysis in the family Cybaeidae Banks, 1892. We greatly increase generic-level sampling, assembling ultraconserved element (UCE) data for 18 of 22 described cybaeid genera, including all North American genera, and rigorously test family monophyly using a comprehensive outgroup taxon sample. We also conduct analyses of traditional Sanger loci, allowing curation of some previously published data. Our UCE phylogenomic results support the monophyly of recognized cybaeids, with strongly supported internal relationships, and evidence for five primary molecular subclades. We hypothesize potential morphological synapomorphies for most of these subclades, bringing a robust phylogenomic underpinning to cybaeid classification. A new cybaeid genus
We present a phylogenetic analysis of spiders using a dataset of 932 spider species, representing 115 families (only the family Synaphridae is unrepresented), 700 known genera, and additional representatives of 26 unidentified or undescribed genera. Eleven genera of the orders Amblypygi, Palpigradi, Schizomida and Uropygi are included as outgroups. The dataset includes six markers from the mitochondrial (12S, 16S,
- PAR ID:
- 10245804
- Author(s) / Creator(s):
- ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; more »
- Publisher / Repository:
- Wiley-Blackwell
- Date Published:
- Journal Name:
- Cladistics
- Volume:
- 33
- Issue:
- 6
- ISSN:
- 0748-3007
- Format(s):
- Medium: X Size: p. 574-616
- Size(s):
- p. 574-616
- Sponsoring Org:
- National Science Foundation
More Like this
-
Siskiyu gen. nov. and speciesSiskiyu armilla sp. nov. is discovered and described from far northern California and adjacent southern Oregon and a new species in the elusive genusCybaeozyga ,C. furtiva sp. nov. , is described from far northern California. -
Abstract Phylogenetic relationships of Vestini with extensive sampling were inferred using 37 taxa scored for 66 morphological characters. Consistent with recent DNA analyses, Vesta is found to be sister to Photurinae rendering Vestini monotypic. Conversely, our parsimony and model-based analyses robustly support the new subfamily Cladodinae established for Neotropical species of the former Vestini. The cladodine lineage includes Cladodes, Dodacles, Dryptelytra, Ledocas, plus the newly proposed Andecladodes gen. nov. and Brasilocladodes gen. nov. While Ledocas is mostly paraphyletic, Cladodes is polyphyletic and, therefore, Cladodes s.s. is introduced. Further, most trees presented a distinct Nyctocrepis, which is revalidated and includes the subgenus Fenestratocladodes (transferred from Cladodes). Finally, a highly supported crown clade designated as the Dodacles lineage is regularly recovered, splitting into two sister-clades: (1) Dodacles, Brasilocladodes and (2) Dryptelytra, C. proteus, C. solieri and Andecladodes. Four new Andean species are described: Andecladodes cosangensis sp. nov., A. ovalis sp. nov., Dryptelytra pampahermosae sp. nov. and Ledocas pikillactanus sp. nov. To recover the monophyly of genera, the following new combinations are proposed: Brasilocladodes carinatuscomb. nov., Brasilocladodes delalandeicomb. nov., Brasilocladodes illigericomb. nov., Dodacles lateraliscomb. nov. and Dodacles nigercomb. nov. (transferred from Cladodes); Ledocas emissuscomb. nov., Ledocas remixtuscomb. nov. (from Dodacles); Cladodes proteus comb. nov. (from Ledocas) Nyctocrepis malleri comb. nov. and Nyctocrepi stellatacomb. nov. (from Cladodes); and Cladodes cincticolliscomb. nov. and Cladodes melanuruscomb. nov. (from Vesta).more » « less
-
Abstract Relationships among spider families that lack support through other lines of evidence (e.g., morphology) have recently been uncovered through molecular phylogenetics. One such group is the “marronoid” clade, which contains about 3,400 described species in 9 families. Marronoids run the gamut of life history strategies, with social species, species producing a variety of silk types, and species occurring in a range of extreme environments. Despite recognition of the ecological variability in the group, there remains uncertainty about family- level relationships, leaving diverse ecologies without an evolutionary context. The phylogenies produced to date have relatively low nodal support, there are few defined morphological synapomorphies, and the internal relationships of many families remain unclear. We use 93 exemplars from all marronoid families and ultraconserved element loci captured in silico from a combination of 48 novel low-coverage whole genomes and genomic data from the Sequence Read Archive (SRA) to produce a 50% occupancy matrix of 1,277 loci from a set of ultraconserved element probes. These loci were used to infer a phylogeny of the marronoid clade and to evaluate the familial relationships within the clade, and were combined with single-locus (Sanger) legacy data to further increase taxonomic sampling. Our results indicate a clearly defined and well-supported marronoid clade and provide evidence for both monophyly and paraphyly within the currently defined families of the clade. We propose taxonomic changes in accordance with the resulting phylogenetic hypothesis, including elevating Cicurinidae (restored status) and Macrobunidae (new rank).
-
Abstract Gracillariidae is the most taxonomically diverse cosmopolitan leaf‐mining moth family, consisting of nearly 2000 named species in 105 described genera, classified into eight extant subfamilies. The majority of gracillariid species are internal plant feeders as larvae, creating mines and galls in plant tissue. Despite their diversity and ecological adaptations, their phylogenetic relationships, especially among subfamilies, remain uncertain. Genomic data (83 taxa, 589 loci) were integrated with Sanger data (130 taxa, 22 loci), to reconstruct a phylogeny of Gracillariidae. Based on analyses of both datasets combined and analyzed separately, monophyly of Gracillariidae and all its subfamilies, monophyly of the clade “LAMPO” (subfamilies: Lithocolletinae, Acrocercopinae, Marmarinae, Phyllocnistinae, and Oecophyllembiinae) and relationships of its subclade “AMO” (subfamilies: Acrocercopinae, Marmarinae, and Oecophyllembiinae) were strongly supported. A sister‐group relationship of Ornixolinae to the remainder of the family, and a monophyletic leaf roller lineage (
Callicercops Vári + Parornichinae) + Gracillariinae, as sister to the “LAMPO” clade were supported by the most likely tree. Dating analyses indicate a mid‐Cretaceous (105.3 Ma) origin of the family, followed by a rapid diversification into the nine subfamilies predating the Cretaceous–Palaeogene extinction. We hypothesize that advanced larval behaviours, such as making keeled or tentiform blotch mines, rolling leaves and galling, allowed gracillariids to better avoid larval parasitoids allowing them to further diversify. Finally, we stabilize the classification by formally re‐establishing the subfamily ranks of Marmarinaestat.rev ., Oecophyllembiinaestat.rev . and Parornichinaestat.rev ., and erect a new subfamily, Callicercopinae Li, Ohshima and Kawahara to accommodate the enigmatic genusCallicercops . -
Abstract The frenulum is a wing coupling structure that is found on the wings of most families of Lepidoptera. It is a single bristle or set of bristles that originate from the base of the hindwing that often interlocks with the forewing during flight. This wing coupling mechanism is thought to have been a major evolutionary innovation that allowed for enhanced flight in Lepidoptera. The sack‐bearer moths (Mimallonidae) are unusual among Lepidoptera in that not all species within the family have a frenulum. We test the hypothesis that the frenulum is not necessary and is therefore lost in mimallonids that have longer male forewings, because such wings are perhaps better suited to be coupled by other means. To understand the evolution of the frenulum, we inferred the most taxonomically and genetically sampled anchored hybrid enrichment‐based phylogeny of Mimallonidae, including 604 loci from all 41 genera and from 120 species, covering about 40% of the described species in the family. The maximum likelihood tree robustly supports major relationships within the family, and ancestral state reconstruction clearly recovers the frenulum as the plesiomorphic condition in Mimallonidae. Our results show that the frenulum is more often observed in species that have shorter, rather than longer, male forewings. The frenulum has historically been used as an important character for intrafamilial classification in Mimallonidae, but our results conclusively show that this character system is more variable than previously thought. Based on our results, we erect two new subfamilies, Roelofinae St Laurent & Kawahara,
subfam.n. and Meneviinae St Laurent, Herbin, & Kawahara,subfam.n. , for four genera previously consideredincertae sedis. In the predominantly frenulum‐lacking clade Cicinninae, we describe a new genus,Cerradocinnus St Laurent, Mielke, & Kawahara,gen.n. , and the genusGonogramma stat. rev. is revalidated to include many species previously placed inCicinnus sensu lato. With these changes,Cicinnus can now be considered monophyletic. Thirty‐three species are transferred toGonogramma fromCicinnus sensu lato.This published work has been registered on Zoobank,
http://zoobank.org/urn:lsid:zoobank.org:pub:E33100E1‐DA6A‐4814‐A312‐36CBAA168B8B .