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1. Rhizobiome of ‘Ōhi‘a Lehua (Metrosideros polymorpha) Offers Insight into Plant-Microbe-Invertebrate Interactions in the Subsurface

   https://doi.org/10.3897/aca.6.e108263  

   Engel, Annette ; Steck, Mireille ; Paterson, Audrey ; Van Gieson, Amir ; Porter, Megan ; Chong, Rebecca ( October 2023 , ARPHA Conference Abstracts)

   Chi Fru, Ernest ; Chik, Alex ; Colwell, Fredrick ; Dittrich, Maria ; Engel, Annette ; Keenan, Sarah ; Meckenstock, Rainer ; Omelon, Christopher ; Purkamo, Lotta ; Weisener, Chris (Ed.)

   Roots are common features in basaltic lava tube caves on the island of Hawai‘i. For the past 50 years, new species of cave-adapted invertebrates, including cixiid planthoppers, crickets, thread-legged bugs, and spiders, have been discovered from root patches in lava tubes on different volcanoes and across variable climatic conditions. Assessing vegetation on the surface above lava tube passages, as well as genetic characterization of roots from within lava tubes, suggest that most roots belong to the native pioneer tree, ‘ōhi‘a lehua (Metrosideros polymorpha). Planthoppers are the primary consumers of sap at the base of the subsurface food web. However, root physicochemistry and rhizobiome microbial diversity and functional potential have received little attention. This study focuses on characterizing the ‘ōhi‘a rhizobiome, accessed from free-hanging roots inside lava tubes. Using these results, we can begin to evaluate the development and evolution of plant-microbe-invertebrate relationships.

   We explored lava tubes formed in flows of differing elevations and ages, from about 140 to 3000 years old, on Mauna Loa, Kīlauea, and Hualālai volcanoes on Hawai‘i Island. Invertebrate diversity was evaluated from root galleries and non-root galleries, in situ fluid physicochemistry was measured, and root and bare rock fluids (e.g., water, sap) were collected to determine major ion concentrations, as well as non-purgeable organic carbon (NPOC) and total nitrogen (TN) content. To verify root identity, DNA was extracted, and three sets of primers were used. After screening for onlyMetrosiderosspp., the V4 region of the 16S rRNA gene was sequenced and taxonomy was assigned.

   Root fluids were viscous and ranged in color from clear to yellow to reddish orange. Root fluids had 2X to 10X higher major ion concentrations compared to rock water. The average root NPOC and TN concentrations were 192 mg/L and 5.2 mg/L, respectively, compared to rock water that had concentrations of 6.8 mg/L and 1.8 mg/L, respectively. Fluids from almost 300 root samples had pH values that ranged from 2.2 to 5.6 (average pH 4.63) and were lower than rock water (average pH 6.39). Root fluid pH was comparable to soil pH from montane wet forests dominated by ‘ōhi‘a (Selmants et al. 2016), which can grow in infertile soil with pH values as low as 3.6. On Hawai‘i, rain water pH averages 5.2 at sea level and systematically decreases with elevation to pH 4.3 at 2500 m (Miller and Yoshinaga 2012), but root fluid pH did not correlate with elevation, temperature, relative humidity, inorganic and organic constituents, or age of flow. Root fluid acidity is likely due to concentrated organic compounds, sourced as root exudates, and this habitat is acidic for the associated invertebrates.

   From 62 root samples, over 66% were identified to the genusMetrosideros. A few other identifications of roots from lava tube systems where there had been extensive clear-cutting and ranching included monkey pod tree, coconut palm,Ficusspp., and silky oak.

   The 16S rRNA gene sequence surveys revealed that root bacterial communities were dominated by few groups, including Burkholderiaceae, as well as Acetobacteraceae, Sphingomonadaceae, Acidobacteriaceae, Gemmataceae, Xanthobacteraceae, and Chitinophagaceae. However, most of the reads could not be classified to a specific genus, which suggested that the rhizobiome harbor novel diversity. Diversity was higher from wetter climates. The root communities were distinct from those described previously from ‘ōhi‘a flowers and leaves (Junker and Keller 2015) and lava tube rocky surfaces (Hathaway et al. 2014) where microbial groups were specifically presumed capable of heterotrophy, methanotrophy, diazotrophy, and nitrification. Less can be inferred for the rhizobiome metabolism, although most taxa are likely aerobic heterotrophs. Within the Burkholderiaceae, there were high relative abundances of sequences affiliated with the genusParaburkholderia, which includes known plant symbionts, as well as the acidophilic generaAcidocellaandAcidisomafrom the Acetobacteraceae, which were retrieved predominately from caves in the oldest lava flows that also had the lowest root pH values. It is likely that the bacterial groups are capable of degrading exudates and providing nutritional substrates for invertebrate consumers that are not provided by root fluids (i.e., phloem) alone.

   As details about the biochemistry of ‘ōhi‘a have been missing, characterizing the rhizobiome from lava tubes will help to better understand potential plant-microbe-invertebrate interactions and ecological and evolutionary relationships through time. In particular, the microbial rhizobiome may produce compounds used by invertebrates nutritionally or that affect their behavior, and changes to the rhizobiome in response to environmental conditions may influence invertebrate interactions with the roots, which could be important to combat climate change effects or invasive species introductions.

    

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2. Habitat differentiation among three Nigeria–Cameroon chimpanzee ( Pan troglodytes ellioti ) populations

   https://doi.org/10.1002/ece3.4871  

   Abwe, Ekwoge E. ; Morgan, Bethan J. ; Tchiengue, Barthelemy ; Kentatchime, Fabrice ; Doudja, Roger ; Ketchen, Marcel E. ; Teguia, Eric ; Ambahe, Ruffin ; Venditti, Dana M. ; Mitchell, Matthew W. ; et al ( January 2019 , Ecology and Evolution)

   Ecological niche models (ENMs) are often used to predict species distribution patterns from datasets that describe abiotic and biotic factors at coarse spatial scales. Ground‐truthing ENMs provide important information about how these factors relate to species‐specific requirements at a scale that is biologically relevant for the species. Chimpanzees are territorial and have a predominantly frugivorous diet. The spatial and temporal variation in fruit availability for different chimpanzee populations is thus crucial, but rarely depicted in ENMs. The genetic and geographic distinction within Nigeria–Cameroon chimpanzee (Pan troglodytes ellioti) populations represents a unique opportunity to understand fine scale species‐relevant ecological variation in relation to ENMs. In Cameroon,P. t. elliotiis composed of two genetically distinct populations that occupy different niches: rainforests in western Cameroon and forest–woodland–savanna mosaic (ecotone) in central Cameroon. We investigated habitat variation at three representative sites using chimpanzee‐relevant environmental variables, including fruit availability, to assess how these variables distinguish these niches from one another. Contrary to the assumption of most ENM studies that intact forest is essential for the survival of chimpanzees, we hypothesized that the ecotone and human‐modified habitats in Cameroon have sufficient resources to sustain large chimpanzee populations. Rainfall, and the diversity, density, and size of trees were higher at the rainforest. The ecotone had a higher density of terrestrial herbs and lianas. Fruit availability was higher at Ganga (ecotone) than at Bekob and Njuma. Seasonal variation in fruit availability was highest at Ganga, and periods of fruit scarcity were longer than at the rainforest sites. Introduced and secondary forest species linked with anthropogenic modification were common at Bekob, which reduced seasonality in fruit availability. Our findings highlight the value of incorporating fine scale species‐relevant ecological data to create more realistic models, which have implications for local conservation planning efforts.

    

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3. Integrating anthropogenic factors into regional‐scale species distribution models—A novel application in the imperiled sagebrush biome

   https://doi.org/10.1111/gcb.14728  

   Requena‐Mullor, Juan M. ; Maguire, Kaitlin C. ; Shinneman, Douglas J. ; Caughlin, Timothy Trevor ( July 2019 , Global Change Biology)

   Species distribution models (SDMs) that rely on regional‐scale environmental variables will play a key role in forecasting species occurrence in the face of climate change. However, in the Anthropocene, a number of local‐scale anthropogenic variables, including wildfire history, land‐use change, invasive species, and ecological restoration practices can override regional‐scale variables to drive patterns of species distribution. Incorporating these human‐induced factors into SDMs remains a major research challenge, in part because spatial variability in these factors occurs at fine scales, rendering prediction over regional extents problematic. Here, we used big sagebrush (Artemisia tridentataNutt.) as a model species to explore whether including human‐induced factors improves the fit of the SDM. We applied a Bayesian hurdle spatial approach using 21,753 data points of field‐sampled vegetation obtained from the LANDFIRE program to model sagebrush occurrence and cover by incorporating fire history metrics and restoration treatments from 1980 to 2015 throughout the Great Basin of North America. Models including fire attributes and restoration treatments performed better than those including only climate and topographic variables. Number of fires and fire occurrence had the strongest relative effects on big sagebrush occurrence and cover, respectively. The models predicted that the probability of big sagebrush occurrence decreases by 1.2% (95% CI: −6.9%, 0.6%) when one fire occurs and cover decreases by 44.7% (95% CI: −47.9%, −41.3%) if at least one fire occurred over the 36 year period of record. Restoration practices increased the probability of big sagebrush occurrence but had minimal effect on cover. Our results demonstrate the potential value of including disturbance and land management along with climate in models to predict species distributions. As an increasing number of datasets representing land‐use history become available, we anticipate that our modeling framework will have broad relevance across a range of biomes and species.

    

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4. Non‐native freshwater snails: a global synthesis of invasion status, mechanisms of introduction, and interactions with natural enemies

   https://doi.org/10.1111/fwb.13848  

   Preston, Daniel L. ; Crone, Erin R. ; Miller‐ter Kuile, Ana ; Lewis, Catherine D. ; Sauer, Erin L. ; Trovillion, Daniel C. ( November 2021 , Freshwater Biology)

   Non‐native freshwater snails can play important roles as consumers, hosts, and prey. Despite their potential ecological importance, global patterns in non‐native snail taxonomy, geography, and ecology have not been documented. Our objectives were to use a semi‐quantitative systematic review to describe non‐native freshwater snail global diversity, distribution, mechanisms of introduction, and interactions with natural enemies, including parasites and predators.

   Based on 506 relevant publications, we recorded 95 non‐native freshwater snail species from 16 families. Six taxonomic families, and pulmonate snails as a group, were over‐represented relative to the number of species expected by chance. Eight snail species represented 63% of the research records. A few snail taxa (15%) were widespread global invaders, reported from four or more continents, while most invasions were limited to a single continent. Australia and the Pacific Islands were the largest ‘sink’ for non‐native snails, with the greatest difference in the number of non‐native taxa relative to native taxa that had spread to other continents.

   Aquarium hobby sales were implicated as the most common mechanism of introduction (41% of species), followed by “hitchhiking” on aquatic vegetation, human consumption, use for biocontrol, transportation in canals, commercial shipping, and outdoor recreation. A search of internet sales posts indicated that four of the six over‐represented snail families were readily available for purchase online.

   Non‐native snails hosted parasites of wildlife, livestock, and human health importance, yet on average had 80% lower parasite richness in their non‐native compared to native range. At least 65 taxa were documented as consumers of non‐native snails, including native predators of conservation concern. These findings suggest that non‐native snails often are released from parasitism, but may commonly experience biotic resistance from predators.

   Our synthesis emphasizes the relatively high diversity of non‐native snails, but the disproportionate role of a few taxonomic groups in driving ecological, economic, and public health challenges. Moving forward, it will be important to limit new snail introductions through policy, education, and monitoring, particularly as the effective control of established snail invasions remains challenging in most ecosystems.

    

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5. Shifting landscapes: decoupled urban irrigation and greenness patterns during severe drought

   https://doi.org/10.1088/1748-9326/ab20d4  

   Quesnel, Kimberly J. ; Ajami, Newsha ; Marx, Andrew ( June 2019 , Environmental Research Letters)

   Urban outdoor water conservation and efficiency offer high potential for demand-side management, but irrigation, greenness, and climate interlinks must be better understood to design optimal policies. To identify paired transitions during drought, we matched parcel-level water use data from smart, dedicated irrigation meters with high-spatial resolution, multispectral aerial imagery. We examined changes across 72 non-residential parcels using potable or recycled water for large landscape irrigation over four biennial summers (2010, 2012, 2014, and 2016) that encompassed a historic drought in California. We found that despite little change in irrigation levels during the first few years of the drought, parcel greenness deteriorated. Between summers 2010 and 2014, average parcel greenness decreased −61% for potable water irrigators and −56% for recycled water irrigators, providing evidence that vegetation could not reach its vigor from wetter, cooler years as the drought intensified with abnormally high temperatures. Between summers 2014–2016 as drought severity lessened, irrigation rates decreased significantly in line with high drought saliency, but greenness rebounded ubiquitously, on average +110% for potable water irrigators and +62% for recycled water irrigators, demonstrating climate-driven vegetation recovery as evaporation and plant evapotranspiration rates decreased. Transitions were similar for customers with both potable and recycled water; vegetation changes were dominated by the overarching climatic regime. As irrigation cannot always overcome drought conditions, which will become more severe under climate change, to maintain vegetation health, utilities and urban planners should consider the tradeoffs between providing green spaces and water scarcity. This includes evaluating the roles of climate-appropriate landscaping and adaptive reallocation of potable and recycled water resources to enhance water security. By addressing emerging themes in urban water management through analysis of data from forthcoming water metering and aerial imagery technologies, this research provides a unique perspective on water use, greenness, and drought linkages.

    

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