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1. The Underwater Backscatter Channel: Theory, Link Budget, and Experimental Validation

   https://doi.org/10.1145/3570361.3613265  

   Akbar, Waleed ; Allam, Ahmed ; Adib, Fadel ( October 2023 , ACM)

   Underwater backscatter is a recent networking technology that enables net-zero-power communication and sensing in underwater environments. Existing research on underwater backscatter has focused on designing and demonstrating early systems with impressive capabilities; however, what remains critically missing is an end-to-end analysis of the underwater backscatter communication channel, which is necessary to understand the potential of this technology to scale to real-world applications and practical deployments. This paper presents the first comprehensive theoretical and empirical analysis of the underwater backscatter channel, including the downlink and uplink of end-to-end backscatter. We introduce a closed-form analytical model that encompasses the physical properties of piezoelectric materials, electromechanical coupling, electrical impedance, and the underwater acoustic channel. We verify the correctness of this theoretical analysis through both finite-element-model physical simulations and real-world experimental validation in a river, demonstrating that the analytical model matches our real-world experiments with a median deviation of only 0.76 dB. Using this model, we then simulate the theoretical limits of underwater backscatter as a function of different design parameters and identify pathways for pushing underwater backscatter toward its theoretical limits. 

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2. Wake-up radio-based data forwarding for green wireless networks

   https://doi.org/10.1016/j.comcom.2020.05.046  

   Koutsandria, G. ; DiValerio, V. ; Spenza, D. ; Basagni, S. ; Petrioli, C. ( April 2020 , Computer communications)

   Green wireless networks Wake-up radio Energy harvesting Routing Markov decision process Reinforcement learning 1. Introduction With 14.2 billions of connected things in 2019, over 41.6 billions expected by 2025, and a total spending on endpoints and services that will reach well over $1.1 trillion by the end of 2026, the Internet of Things (IoT) is poised to have a transformative impact on the way we live and on the way we work [1–3]. The vision of this ‘‘connected continuum’’ of objects and people, however, comes with a wide variety of challenges, especially for those IoT networks whose devices rely on some forms of depletable energy support. This has prompted research on hardware and software solutions aimed at decreasing the depen- dence of devices from ‘‘pre-packaged’’ energy provision (e.g., batteries), leading to devices capable of harvesting energy from the environment, and to networks – often called green wireless networks – whose lifetime is virtually infinite. Despite the promising advances of energy harvesting technologies, IoT devices are still doomed to run out of energy due to their inherent constraints on resources such as storage, processing and communica- tion, whose energy requirements often exceed what harvesting can provide. The communication circuitry of prevailing radio technology, especially, consumes relevant amount of energy even when in idle state, i.e., even when no transmissions or receptions occur. Even duty cycling, namely, operating with the radio in low energy consumption ∗ Corresponding author. E-mail address: koutsandria@di.uniroma1.it (G. Koutsandria). https://doi.org/10.1016/j.comcom.2020.05.046 (sleep) mode for pre-set amounts of time, has been shown to only mildly alleviate the problem of making IoT devices durable [4]. An effective answer to eliminate all possible forms of energy consumption that are not directly related to communication (e.g., idle listening) is provided by ultra low power radio triggering techniques, also known as wake-up radios [5,6]. Wake-up radio-based networks allow devices to remain in sleep mode by turning off their main radio when no communication is taking place. Devices continuously listen for a trigger on their wake-up radio, namely, for a wake-up sequence, to activate their main radio and participate to communication tasks. Therefore, devices wake up and turn their main radio on only when data communication is requested by a neighboring device. Further energy savings can be obtained by restricting the number of neighboring devices that wake up when triggered. This is obtained by allowing devices to wake up only when they receive specific wake-up sequences, which correspond to particular protocol requirements, including distance from the destina- tion, current energy status, residual energy, etc. This form of selective awakenings is called semantic addressing [7]. Use of low-power wake-up radio with semantic addressing has been shown to remarkably reduce the dominating energy costs of communication and idle listening of traditional radio networking [7–12]. This paper contributes to the research on enabling green wireless networks for long lasting IoT applications. Specifically, we introduce a ABSTRACT This paper presents G-WHARP, for Green Wake-up and HARvesting-based energy-Predictive forwarding, a wake-up radio-based forwarding strategy for wireless networks equipped with energy harvesting capabilities (green wireless networks). Following a learning-based approach, G-WHARP blends energy harvesting and wake-up radio technology to maximize energy efficiency and obtain superior network performance. Nodes autonomously decide on their forwarding availability based on a Markov Decision Process (MDP) that takes into account a variety of energy-related aspects, including the currently available energy and that harvestable in the foreseeable future. Solution of the MDP is provided by a computationally light heuristic based on a simple threshold policy, thus obtaining further computational energy savings. The performance of G-WHARP is evaluated via GreenCastalia simulations, where we accurately model wake-up radios, harvestable energy, and the computational power needed to solve the MDP. Key network and system parameters are varied, including the source of harvestable energy, the network density, wake-up radio data rate and data traffic. We also compare the performance of G-WHARP to that of two state-of-the-art data forwarding strategies, namely GreenRoutes and CTP-WUR. Results show that G-WHARP limits energy expenditures while achieving low end-to-end latency and high packet delivery ratio. Particularly, it consumes up to 34% and 59% less energy than CTP-WUR and GreenRoutes, respectively. 

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3. The Temple University Digital Pathology Corpus: The Breast Tissue Subset

   https://doi.org/10.1109/SPMB52430.2021.9672275  

   Wevodau, Z. ; Doshna, B. ; Jhala, N. ; Akhtar, I. ; Obeid, I. ; Picone, J. ( December 2021 , Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium (SPMB))

   Obeid, I. (Ed.)

   The Neural Engineering Data Consortium (NEDC) is developing the Temple University Digital Pathology Corpus (TUDP), an open source database of high-resolution images from scanned pathology samples [1], as part of its National Science Foundation-funded Major Research Instrumentation grant titled “MRI: High Performance Digital Pathology Using Big Data and Machine Learning” [2]. The long-term goal of this project is to release one million images. We have currently scanned over 100,000 images and are in the process of annotating breast tissue data for our first official corpus release, v1.0.0. This release contains 3,505 annotated images of breast tissue including 74 patients with cancerous diagnoses (out of a total of 296 patients). In this poster, we will present an analysis of this corpus and discuss the challenges we have faced in efficiently producing high quality annotations of breast tissue. It is well known that state of the art algorithms in machine learning require vast amounts of data. Fields such as speech recognition [3], image recognition [4] and text processing [5] are able to deliver impressive performance with complex deep learning models because they have developed large corpora to support training of extremely high-dimensional models (e.g., billions of parameters). Other fields that do not have access to such data resources must rely on techniques in which existing models can be adapted to new datasets [6]. A preliminary version of this breast corpus release was tested in a pilot study using a baseline machine learning system, ResNet18 [7], that leverages several open-source Python tools. The pilot corpus was divided into three sets: train, development, and evaluation. Portions of these slides were manually annotated [1] using the nine labels in Table 1 [8] to identify five to ten examples of pathological features on each slide. Not every pathological feature is annotated, meaning excluded areas can include focuses particular to these labels that are not used for training. A summary of the number of patches within each label is given in Table 2. To maintain a balanced training set, 1,000 patches of each label were used to train the machine learning model. Throughout all sets, only annotated patches were involved in model development. The performance of this model in identifying all the patches in the evaluation set can be seen in the confusion matrix of classification accuracy in Table 3. The highest performing labels were background, 97% correct identification, and artifact, 76% correct identification. A correlation exists between labels with more than 6,000 development patches and accurate performance on the evaluation set. Additionally, these results indicated a need to further refine the annotation of invasive ductal carcinoma (“indc”), inflammation (“infl”), nonneoplastic features (“nneo”), normal (“norm”) and suspicious (“susp”). This pilot experiment motivated changes to the corpus that will be discussed in detail in this poster presentation. To increase the accuracy of the machine learning model, we modified how we addressed underperforming labels. One common source of error arose with how non-background labels were converted into patches. Large areas of background within other labels were isolated within a patch resulting in connective tissue misrepresenting a non-background label. In response, the annotation overlay margins were revised to exclude benign connective tissue in non-background labels. Corresponding patient reports and supporting immunohistochemical stains further guided annotation reviews. The microscopic diagnoses given by the primary pathologist in these reports detail the pathological findings within each tissue site, but not within each specific slide. The microscopic diagnoses informed revisions specifically targeting annotated regions classified as cancerous, ensuring that the labels “indc” and “dcis” were used only in situations where a micropathologist diagnosed it as such. Further differentiation of cancerous and precancerous labels, as well as the location of their focus on a slide, could be accomplished with supplemental immunohistochemically (IHC) stained slides. When distinguishing whether a focus is a nonneoplastic feature versus a cancerous growth, pathologists employ antigen targeting stains to the tissue in question to confirm the diagnosis. For example, a nonneoplastic feature of usual ductal hyperplasia will display diffuse staining for cytokeratin 5 (CK5) and no diffuse staining for estrogen receptor (ER), while a cancerous growth of ductal carcinoma in situ will have negative or focally positive staining for CK5 and diffuse staining for ER [9]. Many tissue samples contain cancerous and non-cancerous features with morphological overlaps that cause variability between annotators. The informative fields IHC slides provide could play an integral role in machine model pathology diagnostics. Following the revisions made on all the annotations, a second experiment was run using ResNet18. Compared to the pilot study, an increase of model prediction accuracy was seen for the labels indc, infl, nneo, norm, and null. This increase is correlated with an increase in annotated area and annotation accuracy. Model performance in identifying the suspicious label decreased by 25% due to the decrease of 57% in the total annotated area described by this label. A summary of the model performance is given in Table 4, which shows the new prediction accuracy and the absolute change in error rate compared to Table 3. The breast tissue subset we are developing includes 3,505 annotated breast pathology slides from 296 patients. The average size of a scanned SVS file is 363 MB. The annotations are stored in an XML format. A CSV version of the annotation file is also available which provides a flat, or simple, annotation that is easy for machine learning researchers to access and interface to their systems. Each patient is identified by an anonymized medical reference number. Within each patient’s directory, one or more sessions are identified, also anonymized to the first of the month in which the sample was taken. These sessions are broken into groupings of tissue taken on that date (in this case, breast tissue). A deidentified patient report stored as a flat text file is also available. Within these slides there are a total of 16,971 total annotated regions with an average of 4.84 annotations per slide. Among those annotations, 8,035 are non-cancerous (normal, background, null, and artifact,) 6,222 are carcinogenic signs (inflammation, nonneoplastic and suspicious,) and 2,714 are cancerous labels (ductal carcinoma in situ and invasive ductal carcinoma in situ.) The individual patients are split up into three sets: train, development, and evaluation. Of the 74 cancerous patients, 20 were allotted for both the development and evaluation sets, while the remain 34 were allotted for train. The remaining 222 patients were split up to preserve the overall distribution of labels within the corpus. This was done in hope of creating control sets for comparable studies. Overall, the development and evaluation sets each have 80 patients, while the training set has 136 patients. In a related component of this project, slides from the Fox Chase Cancer Center (FCCC) Biosample Repository (https://www.foxchase.org/research/facilities/genetic-research-facilities/biosample-repository -facility) are being digitized in addition to slides provided by Temple University Hospital. This data includes 18 different types of tissue including approximately 38.5% urinary tissue and 16.5% gynecological tissue. These slides and the metadata provided with them are already anonymized and include diagnoses in a spreadsheet with sample and patient ID. We plan to release over 13,000 unannotated slides from the FCCC Corpus simultaneously with v1.0.0 of TUDP. Details of this release will also be discussed in this poster. Few digitally annotated databases of pathology samples like TUDP exist due to the extensive data collection and processing required. The breast corpus subset should be released by November 2021. By December 2021 we should also release the unannotated FCCC data. We are currently annotating urinary tract data as well. We expect to release about 5,600 processed TUH slides in this subset. We have an additional 53,000 unprocessed TUH slides digitized. Corpora of this size will stimulate the development of a new generation of deep learning technology. In clinical settings where resources are limited, an assistive diagnoses model could support pathologists’ workload and even help prioritize suspected cancerous cases. ACKNOWLEDGMENTS This material is supported by the National Science Foundation under grants nos. CNS-1726188 and 1925494. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. REFERENCES [1] N. Shawki et al., “The Temple University Digital Pathology Corpus,” in Signal Processing in Medicine and Biology: Emerging Trends in Research and Applications, 1st ed., I. Obeid, I. Selesnick, and J. Picone, Eds. New York City, New York, USA: Springer, 2020, pp. 67 104. https://www.springer.com/gp/book/9783030368432. [2] J. Picone, T. Farkas, I. Obeid, and Y. Persidsky, “MRI: High Performance Digital Pathology Using Big Data and Machine Learning.” Major Research Instrumentation (MRI), Division of Computer and Network Systems, Award No. 1726188, January 1, 2018 – December 31, 2021. https://www. isip.piconepress.com/projects/nsf_dpath/. [3] A. Gulati et al., “Conformer: Convolution-augmented Transformer for Speech Recognition,” in Proceedings of the Annual Conference of the International Speech Communication Association (INTERSPEECH), 2020, pp. 5036-5040. https://doi.org/10.21437/interspeech.2020-3015. [4] C.-J. Wu et al., “Machine Learning at Facebook: Understanding Inference at the Edge,” in Proceedings of the IEEE International Symposium on High Performance Computer Architecture (HPCA), 2019, pp. 331–344. https://ieeexplore.ieee.org/document/8675201. [5] I. Caswell and B. Liang, “Recent Advances in Google Translate,” Google AI Blog: The latest from Google Research, 2020. [Online]. Available: https://ai.googleblog.com/2020/06/recent-advances-in-google-translate.html. [Accessed: 01-Aug-2021]. [6] V. Khalkhali, N. Shawki, V. Shah, M. Golmohammadi, I. Obeid, and J. Picone, “Low Latency Real-Time Seizure Detection Using Transfer Deep Learning,” in Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium (SPMB), 2021, pp. 1 7. https://www.isip. piconepress.com/publications/conference_proceedings/2021/ieee_spmb/eeg_transfer_learning/. [7] J. Picone, T. Farkas, I. Obeid, and Y. Persidsky, “MRI: High Performance Digital Pathology Using Big Data and Machine Learning,” Philadelphia, Pennsylvania, USA, 2020. https://www.isip.piconepress.com/publications/reports/2020/nsf/mri_dpath/. [8] I. Hunt, S. Husain, J. Simons, I. Obeid, and J. Picone, “Recent Advances in the Temple University Digital Pathology Corpus,” in Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium (SPMB), 2019, pp. 1–4. https://ieeexplore.ieee.org/document/9037859. [9] A. P. Martinez, C. Cohen, K. Z. Hanley, and X. (Bill) Li, “Estrogen Receptor and Cytokeratin 5 Are Reliable Markers to Separate Usual Ductal Hyperplasia From Atypical Ductal Hyperplasia and Low-Grade Ductal Carcinoma In Situ,” Arch. Pathol. Lab. Med., vol. 140, no. 7, pp. 686–689, Apr. 2016. https://doi.org/10.5858/arpa.2015-0238-OA. 

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4. Enabling Long-Range Underwater Backscatter via Van Atta Acoustic Networks

   https://doi.org/10.1145/3603269.3604814  

   Eid, Aline ; Rademacher, Jack ; Akbar, Waleed ; Wang, Purui ; Allam, Ahmed ; Adib, Fadel ( September 2023 , ACM)

   We present the design, implementation, and evaluation of Van Atta Acoustic Backscatter (VAB), a technology that enables long-range, ultra-low-power networking in underwater environments. At the core of VAB is a novel, scalable underwater backscatter architecture that bridges recent advances in RF backscatter (Van Atta architectures) with ultra-low-power underwater acoustic networks. Our design introduces multiple innovations across the networking stack, which enable it to overcome unique challenges that arise from the electro-mechanical properties of underwater backscatter and the challenging nature of low-power underwater acoustic channels. We implemented our design in an end-to-end system, and evaluated it in over 1,500 real-world experimental trials in a river and the ocean. Our evaluation in stationary setups demonstrates that VAB achieves a communication range that exceeds 300m in round trip backscatter across orientations (at BER of 10−3). We compared our design head-to-head with past state-of-the-art systems, demonstrating a 15× improvement in communication range at the same throughput and power. By realizing hundreds of meters of range in underwater backscatter, this paper presents the first practical system capable of coastal monitoring applications. Finally, our evaluation represents the first experimental validation of underwater backscatter in the ocean. 

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5. Experience-driven research on programmable networks

   https://doi.org/10.1145/3457175.3457178  

   Kim, Hyojoon ; Chen, Xiaoqi ; Brassil, Jack ; Rexford, Jennifer ( January 2021 , ACM SIGCOMM Computer Communication Review)

   null (Ed.)

   Many promising networking research ideas in programmable networks never see the light of day. Yet, deploying research prototypes in production networks can help validate research ideas, improve them with faster feedback, uncover new research questions, and also ease the subsequent transition to practice. In this paper, we show how researchers can run and validate their research ideas in their own backyards---on their production campus networks---and we have seen that such a demonstrator can expedite the deployment of a research idea in practice to solve real network operation problems. We present P4Campus , a proof-of-concept that encompasses tools, an infrastructure design, strategies, and best practices---both technical and non-technical---that can help researchers run experiments against their programmable network idea in their own network. We use network tapping devices, packet brokers, and commodity programmable switches to enable running experiments to evaluate research ideas on a production campus network. We present several compelling data-plane applications as use cases that run on our campus and solve production network problems. By sharing our experiences and open-sourcing our P4 apps [28], we hope to encourage similar efforts on other campuses. 

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