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1. Tuber luomae , a new spiny-spored truffle species from the Pacific Northwest, USA

   https://doi.org/10.3114/fuse.2020.06.15  

   Eberhart, J.; Trappe, J.; Páez, C. Piña; Bonito, G. (December 2020, Fungal Systematics and Evolution)

   null (Ed.)

   Tuber luomae, a new truffle species known only from the Pacific Northwest, USA, is distinguished by spiny, nonreticulate spores and a two-layered peridium — the outermost layer (pellis) consists of inflated, globose to subpolygonal cells and the inner (subpellis) of narrow hyphae. ITS sequence analyses show that it has phylogenetic affinity to other Tuber species in the Rufum clade. The only other members of the Rufum clade with a strongly developed peridiopellis of large, inflated cells are the southern European T. malacodermum and T. pustulatum and the northern Mexican T. theleascum . We find it interesting that this peridial structure that is uncommon in the Rufum clade has been found in geographically disjunct species. 

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2. The Rediscovery of Noblella peruviana after More than 115 Years Helps Resolve the Molecular Phylogeny and Taxonomy of Noblella (Amphibia, Anura, Strabomantidae)

   https://doi.org/10.3390/d16100613  

   von_May, Rudolf; Diaz, M Isabel; Ttito, Alex; Santa-Cruz, Roy; Catenazzi, Alessandro (October 2024, Diversity)

   We revise the taxonomy of the frog genus Noblella on the basis of a molecular phylogeny. Previous studies recognized that Noblella is non-monophyletic, with one clade distributed from southeastern Peru to northeastern Bolivia and adjacent areas in Brazil and another clade distributed from northern Peru to Ecuador and southeastern Colombia. The lack of sequences from the type species Noblella peruviana prevented the investigation of its phylogenetic position and the status of related taxa. Our rediscovery after more than 115 years allowed for the inclusion of DNA sequences of Noblella peruviana obtained from specimens collected at the type locality in southeastern Peru. We inferred a phylogeny based on a concatenated dataset (three mitochondrial and two nuclear loci) using Bayesian and maximum likelihood methods. Our phylogeny corroborated the non-monophyly of Noblella and helped resolve the status of related taxa, including Psychrophrynella bagrecito, the type species of the genus Psychrophrynella (rediscovered after 42 years). We identified a clade containing N. peruviana, P. bagrecito, and other species of Noblella and Psychrophrynella distributed in southern Peru. Given that the name Noblella predates Psychrophrynella, we propose that Psychrophrynella should be considered a junior synonym of Noblella. The second clade contains species of Noblella distributed in Ecuador and northern Peru, including N. myrmecoides, which used to be the type species of the genus Phyllonastes. Consequently, we propose to reinstate the genus Phyllonastes to accommodate all species of Noblella distributed in Ecuador, northern Peru, southeastern Colombia, and adjacent areas in Brazil. We present an updated taxonomy including new combinations for 12 species and reinstatements for three species. 

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3. Taxonomy in the phylogenomic era: species boundaries and phylogenetic relationships among North American ants of the Crematogaster scutellaris group (Formicidae: Hymenoptera)

   https://doi.org/10.1093/zoolinnean/zlab047  

   Ward, Philip_S; Blaimer, Bonnie_B (March 2022, Zoological Journal of the Linnean Society)

   Abstract We investigate the species-level taxonomy and evolutionary history of Nearctic ants in the Crematogaster scutellaris group (Hymenoptera: Formicidae), drawing on evidence from morphology and UCE (ultraconserved element) phylogenomics. The New World species in this group form a well-supported clade that originated in the Late Miocene (~7.3 Mya) and subsequently diverged into three major lineages: the C. coarctata clade (south-western Nearctic), the C. opaca clade (south-western Nearctic and northern Neotropics) and the C. lineolata clade (eastern Nearctic and Caribbean, with four isolated south-west endemics). We hypothesize trans-Beringian dispersal into the New World, west-to-east movement within North America and restriction of mesophilic species to the east with increasing aridification of the west. The ancestral nesting behaviour of these ants is inferred to be ground-dwelling, and this is still the predominant condition in the arid west, whereas most species in the eastern United States are arboreal. We resurrect from synonymy nine species and describe three new species: C. detecta sp. nov. (from Nevada), C. parapilosa sp. nov. (Florida) and C. vetusta sp. nov. (Arizona). We provide a worker-based key to the 34 species of Crematogaster occurring in America north of Mexico, but emphasize that there are still ongoing taxonomic issues that need to be resolved. 

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4. The value of individual identification in studies of free-living hyenas and aardwolves

   https://doi.org/10.1007/s42991-022-00309-4  

   Spagnuolo, Olivia S.; Lemerle, Marie A.; Holekamp, Kay E.; Wiesel, Ingrid (January 2022, Mammalian Biology)

   From population estimates to social evolution, much of our understanding of the family Hyaenidae is drawn from studies of known individuals. The extant species in this family (spotted hyenas, Crocuta crocuta, brown hyenas, Parahyaena brunnea, striped hyenas, Hyaena hyaena, and aardwolves, Proteles cristata) are behaviorally diverse, presenting an equally diverse set of logistical constraints on capturing and marking individuals. All these species are individually identifiable by their coat patterns, providing a useful alternative to man-made markings. Many studies have demonstrated the utility of this method in answering a wide range of research questions across all four species, with some employing a creative fusion of techniques. Despite its pervasiveness in basic research on hyenas and aardwolves, individual identification has rarely been applied to the conservation and management of these species. We argue that individual identification using naturally occurring markings in applied research could prove immensely helpful, as this could further improve accuracy of density estimates, reveal characteristics of suitable habitat, identify threats to population persistence, and help to identify individual problem animals. 

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5. Phylogeography of the Cow Knob Salamander (Plethodon punctatus Highton): populations on isolated Appalachian mountaintops are disjunct but not divergent

   https://doi.org/10.3389/famrs.2023.1175492  

   Graham, Matthew R.; Flint, William D.; Powell, Alexsis M.; Fet, Victor; Pauley, Thomas K. (August 2023, Frontiers in Amphibian and Reptile Science)

   Although many studies have examined how taxa responded to Pleistocene climate fluctuations in the Appalachian Mountains, impacts on high-elevation endemics of Central Appalachia are not yet understood. We use mitochondrial (ND4 & Cytb) and nuclear (GAPD) DNA sequences to investigate the phylogeography of the Cow Knob Salamander (Plethodon punctatus), a woodland species from Central Appalachian highlands thought to have origins in the Pleistocene. Data from 72 tail tips representing 25 sites revealed that the species comprises two geographically cohesive mitochondrial clades with a narrow, putative contact zone on Shenandoah Mountain. Molecular clock estimates indicate the clades diverged in the Middle Pleistocene. The population size of the Southern clade appears to have remained stable for at least 50,000 years. Despite spanning several isolated mountain systems, the Northern clade has exceptionally low genetic diversity, probably due to recent demographic expansion. Palaeodemographic hypothesis testing supported a scenario in which a founder effect characterized the Northern clade as it diverged from the Southern clade. Species distribution models predicted no suitable habitat for the species during the Last Glacial Maximum. Ultimately, Pleistocene glacial climates may have driven the species from the northern half of its current range, with recolonization events by members of the Northern clade as climates warmed. Density dependent processes may now maintain a narrow contact zone between the two clades. 

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