Image registration is an essential task in medical image analysis. We propose two novel unsupervised diffeomorphic image registration networks, which use deep Residual Networks (ResNets) as numerical approximations of the underlying continuous diffeomorphic setting governed by ordinary differential equations (ODEs), viewed as a Eulerian discretization scheme. While considering the ODE-based parameterizations of diffeomorphisms, we consider both stationary and non-stationary (time varying) velocity fields as the driving velocities to solve the ODEs, which give rise to our two proposed architectures for diffeomorphic registration. We also employ Lipschitz-continuity on the Residual Networks in both architectures to define the admissible Hilbert space of velocity fields as a Reproducing Kernel Hilbert Spaces (RKHS) and regularize the smoothness of the velocity fields. We apply both registration networks to align and segment the OASIS brain MRI dataset. Experimental results demonstrate that our models are computational efficient and achieve comparable registration results with a smoother deformation field.
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Diffeomorphic Registration with Density Changes for the Analysis of Imbalanced Shapes
This paper introduces an extension of diffeomorphic registration to enable the morphological analysis of data structures with inherent density variations and imbalances. Building on the framework of Large Diffeomorphic Metric Matching (LDDMM) registration and measure representations of shapes, we propose to augment previous measure deformation approaches with an additional density (or mass) transformation process. We then derive a variational formulation for the joint estimation of optimal deformation and density change between two measures. Based on the obtained optimality conditions, we deduce a shooting algorithm to numerically estimate solutions and illustrate the practical interest of this model for several types of geometric data such as fiber bundles with inconsistent fiber densities or incomplete surfaces.
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- Award ID(s):
- 1945224
- PAR ID:
- 10316564
- Date Published:
- Journal Name:
- Information Processing in Medical Imaging
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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- Free Publicly Accessible Full Text
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Accepted Manuscript1.0
- Conference Paper:
- https://doi.org/10.1007/978-3-030-78191-0_3
