skip to main content


Title: Computational discovery of high charge mobility self-assembling π-conjugated peptides
Organic electronics offer a route toward electronically active biocompatible soft materials capable of interfacing with biological and living systems. One class of promising organic electronic materials are π-conjugated peptides, synthetic molecules comprising an aromatic core flanked by oligopeptides, that can be engineered to self-assemble into elongated nanostructures with emergent optoelectronic functionality. In this work, we combine molecular dynamics simulations with electronic structure and charge transport calculations to computationally screen for high charge mobility π-conjugated peptides and to elucidate design rules linking aromatic core character with charge mobility. We consider within our screening library variations in the aromatic core chemistry and length of the alkyl chains connecting the oligopeptide wings to the core. After completing our computational screen we identify particular π-conjugated peptides capable of producing self-assembled biocompatible nanoaggregates with predicted hole mobilities of 0.224 cm^2/(Vs) and electron mobilities of 0.143 cm^2/(Vs), and uncover design rules that enhance understanding of the molecular determinants of charge mobility within π-conjugated peptide assemblies.  more » « less
Award ID(s):
1841807
NSF-PAR ID:
10316922
Author(s) / Creator(s):
; ; ; ; ;
Date Published:
Journal Name:
Molecular Systems Design & Engineering
ISSN:
2058-9689
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Biocompatible molecules with electronic functionality provide a promising substrate for biocompatible electronic devices and electronic interfacing with biological systems. Synthetic oligopeptides composed of an aromatic π-core flanked by oligopeptide wings are a class of molecules that can self-assemble in aqueous environments into supramolecular nanoaggregates with emergent optical and electronic activity. We present an integrated computational–experimental pipeline employing all-atom molecular dynamics simulations and experimental UV-visible spectroscopy within an active learning workflow using deep representational learning and multi-objective and multi-fidelity Bayesian optimization to design π-conjugated peptides programmed to self-assemble into elongated pseudo-1D nanoaggregates with a high degree of H-type co-facial stacking of the π-cores. We consider as our design space the 694 982 unique π-conjugated peptides comprising a quaterthiophene π-core flanked by symmetric oligopeptide wings up to five amino acids in length. After sampling only 1181 molecules (∼0.17% of the design space) by computation and 28 (∼0.004%) by experiment, we identify and experimentally validate a diversity of previously unknown high-performing molecules and extract interpretable design rules linking peptide sequence to emergent supramolecular structure and properties. 
    more » « less
  2. We have considered three two-dimensional (2D) π-conjugated polymer network ( i.e. , covalent organic frameworks, COFs) materials based on pyrene, porphyrin, and zinc-porphyrin cores connected via diacetylenic linkers. Their electronic structures, investigated at the density functional theory global-hybrid level, are indicative of valence and conduction bands that have large widths, ranging between 1 and 2 eV. Using a molecular approach to derive the electronic couplings between adjacent core units and the electron-vibration couplings, the three π-conjugated 2D COFs are predicted to have ambipolar charge-transport characteristics with electron and hole mobilities in the range of 65–95 cm 2 V −1 s −1 . Such predicted values rank these 2D COFs among the highest-mobility organic semiconductors. In addition, we have synthesized the zinc-porphyrin based 2D COF and carried out structural characterization via powder X-ray diffraction, high-resolution transmission electron microscopy, and surface area analysis, which demonstrates the feasibility of these electroactive networks. Steady-state and flash-photolysis time-resolved microwave conductivity measurements on the zinc-porphyrin COF point to appreciable, broadband photoconductivity while transmission spectral measurements are indicative of extended π-conjugation. 
    more » « less
  3. Abstract

    Organic semiconductors are usually polycyclic aromatic hydrocarbons and their analogs containing heteroatom substitution. Bioinspired materials chemistry of organic electronics promises new charge transport mechanism and specific molecular recognition with biomolecules. We discover organic semiconductors from deoxyribonucleic acid topoisomerase inhibitors, featuring conjugated backbone decorated with hydrogen-bonding moieties distinct from common organic semiconductors. Using ellipticine as a model compound, we find that hydrogen bonds not only guide polymorph assembly, but are also critical to forming efficient charge transport pathways along π−conjugated planes when at a low dihedral angle by shortening the end-to-end distance of adjacent π planes. In the π−π stacking and hydrogen-bonding directions, the intrinsic, short-range hole mobilities reach as high as 6.5 cm2V−1s−1and 4.2 cm2V−1s−1measured by microwave conductivity, and the long-range apparent hole mobilities are up to 1.3 × 10–3cm2V−1s−1and 0.4 × 10–3cm2V−1s−1measured in field-effect transistors. We further demonstrate printed transistor devices and chemical sensors as potential applications.

     
    more » « less
  4. Abstract

    Organic electrochemical transistors (OECTs) have gained considerable attention due to their potential applications in emerging biosensor platforms. The use of conjugated polyelectrolytes (CPEs) as active materials in OECTs is particularly advantageous owing to their functional, water‐processable, and biocompatible nature, as well as their tunable electronic and ionic transport properties. However, there exists a lack of systematic studies of the structure‐property relationships of these materials with respect to OECT performance. This study shows how by tuning the molecular weight of self‐doped CPE (CPE‐K) it is possible to fabricate OECTs with aµC*value of 14.7 F cm−1V−1s−1, one order of magnitude higher than previously reported CPE‐based devices. Furthermore, OECTs with a transconductance of 120 mS are demonstrated via device engineering. While CPE‐K batches with different molecular weights show good doping behavior and high volumetric capacitance, as confirmed by spectroelectrochemistry and electrochemical impedance spectroscopy, the medium molecular weight possesses the highest carrier mobility of ≈0.1 cm2V−1s−1leading to the highest transconductance. The enhanced charge transport is due to a favorable charge percolation pathway, as revealed by the combination of X‐ray analysis and conductive atomic force microscope. These insights provide guidelines for further improving the performance of CPE‐based OECTs.

     
    more » « less
  5. null (Ed.)
    Peptidic sequences when conjugated to π-electronic groups form self-assembled networks of π-electron pathways. These materials hold promise for bio-interfacing charge transporting applications because of their aqueous processability and compatibility. In this work, we incorporated diketopyrrolopyrrole (DPP), a well-established π-core for organic electronic applications, within the peptidic sequence. We embedded different numbers of thiophene rings (2 and 3) on both sides of the DPP to alter the length of the π-cores. We also varied the length of the N-alkyl side chains (methyl, butyl, hexyl) attached to the DPP core. These variations allowed us to explicitly study the effect of π-core and N-alkyl side-chain length on photophysical properties and morphology of the resulting nanomaterials. All of these molecules formed H-type aggregates in the assembled state. Longer π-cores have relatively red-shifted absorption maxima, whereas the N-alkyl variation did not present significant photophysical changes. 
    more » « less