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1. Enhancement of tetrel bond involving tetrazole-TtR ₃ (Tt = C, Si; R = H, F). Promotion of SiR ₃ transfer by a triel bond

   https://doi.org/10.1039/D2CP04194D  

   Wu, Qiaozhuo; Xie, Xiaoying; Li, Qingzhong; Scheiner, Steve (November 2022, Physical Chemistry Chemical Physics)

   When attached to a tetrazole, a TtR 3 group (Tt = C, Si; R = H, F) engages in a Tt⋯N tetrel bond (TtB) with the Lewis base NCM (M = Li, Na). MP2/aug-cc-pVTZ calculations find that the Si⋯N TtB is rather strong, more than 20 kcal mol −1 for SiH 3 , and between 46 and 53 kcal mol −1 for SiF 3 . The C⋯N TtBs are relatively weaker, less than 8 kcal mol −1 . All of these bonds are intensified when a BH 3 or BF 3 molecule forms a triel bond to a N atom of the tetrazole ring, particularly for the C⋯N TtB, up to 11 kcal mol −1 . In these triads, the SiR 3 group displaces far enough along the line toward the base that it may be thought of as half transferred. 

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2. The non-covalently bound SO⋯H ₂ O system, including an interpretation of the differences between SO⋯H ₂ O and O ₂ ⋯H ₂ O

   https://doi.org/10.1039/C8CP05749D  

   Misiewicz, Jonathon P.; Noonan, Julia A.; Turney, Justin M.; Schaefer, Henry F. (November 2018, Physical Chemistry Chemical Physics)

   Despite the interest in sulfur monoxide (SO) among astrochemists, spectroscopists, inorganic chemists, and organic chemists, its interaction with water remains largely unexplored. We report the first high level theoretical geometries for the two minimum energy complexes formed by sulfur monoxide and water, and we report energies using basis sets as large as aug-cc-pV(Q+d)Z and correlation effects through perturbative quadruple excitations. One structure of SO⋯H 2 O is hydrogen bonded and the other chalcogen bonded. The hydrogen bonded complex has an electronic energy of −2.71 kcal mol −1 and a zero kelvin enthalpy of −1.67 kcal mol −1 , while the chalcogen bonded complex has an electronic energy of −2.64 kcal mol −1 and a zero kelvin enthalpy of −2.00 kcal mol −1 . We also report the transition state between the two structures, which lies below the SO⋯H 2 O dissociation limit, with an electronic energy of −1.26 kcal mol −1 and an enthalpy of −0.81 kcal mol −1 . These features are much sharper than for the isovalent complex of O 2 and H 2 O, which only possesses one weakly bound minimum, so we further analyze the structures with open-shell SAPT0. We find that the interactions between O 2 and H 2 O are uniformly weak, but the SO⋯H 2 O complex surface is governed by the superior polarity and polarizability of SO, as well as the diffuse electron density provided by sulfur's extra valence shell. 

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3. The bismuth tetramer Bi ₄ : the ν ₃ key to experimental observation

   https://doi.org/10.1039/C8CP03529F  

   Lahm, Mitchell E.; Hoobler, Preston R.; Turney, Justin M.; Peterson, Kirk A.; Schaefer, Henry F. (January 2018, Physical Chemistry Chemical Physics)

   The spectroscopic identification of Bi 4 has been very elusive. Two constitutional Bi 4 isomers of T d and C 2v symmetry are investigated and each is found to be a local energetic minimum. The optimized geometries and vibrational frequencies of these two isomers are obtained at the CCSD(T)/cc-pVQZ-PP level of theory, utilizing the Stoll, Metz, and Dolg 60-electron effective core potential. The fundamental frequencies of the T d isomer are obtained at the same level of theory. The focal point analysis method, from a maximum basis set of cc-pV5Z-PP, and proceeding to a maximum correlation method of CCSDTQ, was employed to determine the dissociation energy of Bi 4 ( T d ) into two Bi 2 and the adiabatic energy difference between the C 2v and T d isomers of Bi 4 . These quantities are predicted to be +65 kcal mol −1 and +39 kcal mol −1 , respectively. Two electron vertical excitation energies between the T d and C 2v electronic configurations are computed to be 156 kcal mol −1 for the T d isomer and 9 kcal mol −1 for the C 2v isomer. The most probable approach to laboratory spectroscopic identification of Bi 4 is via an infrared spectrum. The predicted fundamentals (cm −1 ) with harmonic IR intensities in parentheses (km mol −1 ) are 94(0), 123(0.23), and 167(0) for the T d isomer. The moderate IR intensity for the only allowed fundamental may explain why Bi 4 has yet to be observed. Through natural bond orbital analysis, the C 2v isomer of Bi 4 was discovered to exhibit “long-bonding” between the furthest apart ‘wing’ atoms. This long-bonding is postulated to be facilitated by the σ-bonding orbital between the ‘spine’ atoms of the C 2v isomer. 

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4. Accurate Interaction Energies of CO ₂ with the 20 Naturally Occurring Amino Acids

   https://doi.org/10.1002/cphc.202300027  

   Sylvanus, Amarachi_G; Vogiatzis, Konstantinos_D (May 2023, ChemPhysChem)

   Abstract We have performed a series of highly accurate calculations between CO₂and the 20 naturally occurring amino acids for the investigation of the attractive noncovalent interactions. Different nucleophilic groups present in the amino acid structures were considered (α‐NH₂, COOH, side groups), and the stronger binding sites were identified. A database of accurate reference interactions energies was compiled as computed by explicitly‐correlated coupled‐cluster singles‐and‐doubles, together with perturbative triples extrapolated to the complete‐basis‐set limit. The CCSD(F12)(T)/CBS reference values were used for comparing a variety of popular density functionals with different basis sets. Our results show that most density functionals with the triple‐zeta basis set def2‐TZVPP align with the CCSD(F12)(T)/CBS reference values, but errors range from 0.1 kcal/mol up to 1.0 kcal/mol. 

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5. A comparison between hydrogen and halogen bonding: the hypohalous acid–water dimers, HOX⋯H ₂ O (X = F, Cl, Br)

   https://doi.org/10.1039/C9CP00422J  

   Wolf, Mark E.; Zhang, Boyi; Turney, Justin M.; Schaefer, Henry F. (March 2019, Physical Chemistry Chemical Physics)

   Hypohalous acids (HOX) are a class of molecules that play a key role in the atmospheric seasonal depletion of ozone and have the ability to form both hydrogen and halogen bonds. The interactions between the HOX monomers (X = F, Cl, Br) and water have been studied at the CCSD(T)/aug-cc-pVTZ level of theory with the spin free X2C-1e method to account for scalar relativistic effects. Focal point analysis was used to determine CCSDT(Q)/CBS dissociation energies. The anti hydrogen bonded dimers were found with interaction energies of −5.62 kcal mol −1 , −5.56 kcal mol −1 , and −4.97 kcal mol −1 for X = F, Cl, and Br, respectively. The weaker halogen bonded dimers were found to have interaction energies of −1.71 kcal mol −1 and −3.03 kcal mol −1 for X = Cl and Br, respectively. Natural bond orbital analysis and symmetry adapted perturbation theory were used to discern the nature of the halogen and hydrogen bonds and trends due to halogen substitution. The halogen bonds were determined to be weaker than the analogous hydrogen bonds in all cases but close enough in energy to be relevant, significantly more so with increasing halogen size. 

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