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1. Environmental forcing and predator consumption outweigh the nonconsumptive effects of multiple predators on oyster reefs

   https://doi.org/10.1002/ecy.3041  

   Kimbro, David L.; Tillotson, Hanna G.; White, J. Wilson (April 2020, Ecology)

   Abstract The ability to predict how predators structure ecosystems has been shown to depend on identifying both consumptive effects (CEs) and nonconsumptive effects (NCEs) of predators on prey fitness. Prey populations may also be affected by interactions between multiple predators across life stages of the prey and by environmental factors such as disturbance. However, the intersection of these multiple drivers of prey dynamics has yet to be empirically evaluated. We addressed this knowledge gap using eastern oysters (Crassostrea virginica), a species known to suffer NCEs, as the focal prey. Over 4 months, we manipulated orthogonally the life stage (none, juvenile, adult, or both) at which oysters experienced simulated predation (CE) and exposure to olfactory cues of a juvenile oyster predator (crab), adult predator (conch), sequentially the crab and then the conch, or none. We replicated this experiment at three sites along an environmental gradient in a Florida (USA) estuary. For both juvenile and adult oysters, survival was reduced solely by CEs, and variation in growth was best explained by among‐site variation in water flow, with a much smaller and negative effect of predator cue. Adults exposed to conch cue exhibited reduced growth (an NCE), but this effect was outweighed by a positive CE on growth: Surviving oysters grew faster at lower densities. Finally, conch cue reduced larval settlement (another NCE), but this was swamped by among‐site variation in larval supply. This research highlights how strong environmental gradients and predator CEs may outweigh the influence of NCEs, even in prey known to respond to predator cues. These findings serve as a cautionary tale for the importance of evaluating NCE processes over temporal scales and across environmental gradients relevant to prey demography. 

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2. A healthy but depleted herd: Predators decrease prey disease and density

   https://doi.org/10.1002/ecy.4063  

   Lopez, Laura K.; Cortez, Michael H.; DeBlieux, Turner S.; Menel, Ilona A.; O'Brien, Bruce; Cáceres, Carla E.; Hall, Spencer R.; Duffy, Meghan A. (May 2023, Ecology)

   Abstract The healthy herds hypothesis proposes that predators can reduce parasite prevalence and thereby increase the density of their prey. However, evidence for such predator‐driven reductions in the prevalence of prey remains mixed. Furthermore, even less evidence supports increases in prey density during epidemics. Here, we used a planktonic predator–prey–parasite system to experimentally test the healthy herds hypothesis. We manipulated density of a predator (the phantom midge,Chaoborus punctipennis) and parasitism (the virulent fungusMetschnikowia bicuspidata) in experimental assemblages. Because we know natural populations of the prey (Daphnia dentifera) vary in susceptibility to both predator and parasite, we stocked experimental populations with nine genotypes spanning a broad range of susceptibility to both enemies. Predation significantly reduced infection prevalence, eliminating infection at the highest predation level. However, lower parasitism did not increase densities of prey; instead, prey density decreased substantially at the highest predation levels (a major density cost of healthy herds predation). This density result was predicted by a model parameterized for this system. The model specifies three conditions for predation to increase prey density during epidemics: (i) predators selectively feed on infected prey, (ii) consumed infected prey release fewer infectious propagules than unconsumed prey, and (iii) sufficiently low infection prevalence. While the system satisfied the first two conditions, prevalence remained too high to see an increase in prey density with predation. Low prey densities caused by high predation drove increases in algal resources of the prey, fueling greater reproduction, indicating that consumer–resource interactions can complicate predator–prey–parasite dynamics. Overall, in our experiment, predation reduced the prevalence of a virulent parasite but, at the highest levels, also reduced prey density. Hence, while healthy herds predation is possible under some conditions, our empirical results make it clear that the manipulation of predators to reduce parasite prevalence may harm prey density. 

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3. Effects of mixotroph evolution on trophic transfer

   https://doi.org/10.1093/plankt/fbae053  

   Honig, Meredith_A; Barbaglia, Gina_S; Doyle, Margaret_D; Moeller, Holly_V; Beisner, ed., Beatrix_E (September 2024, Journal of Plankton Research)

   Abstract Plankton form the foundation of marine food webs, playing fundamental roles in mediating trophic transfer and the movement of organic matter. Increasing ocean temperatures have been documented to drive evolution of plankton, resulting in changes to metabolic traits that can affect trophic transfer. Despite this, there are few direct tests of the effects of such evolution on predator–prey interactions. Here, we used two thermally adapted strains of the marine mixotroph (organism that combines both heterotrophy and autotrophy to obtain energy) Ochromonas as prey and the generalist dinoflagellate predator Oxyrrhis marina to quantify how evolved traits of mixotrophs to hot and cold temperatures affects trophic transfer. Evolution to hot temperatures reduced the overall ingestion rates of both mixotroph strains, consequently weakening predator–prey interactions. We found variability in prey palatability and predator performance with prey thermal adaptation and between strains. Further, we quantified how ambient temperature affects predator grazing on mixotrophs thermally adapted to the same conditions. Increasing ambient temperatures led to increased ingestion rates but declines in clearance rates. Our results for individual, pairwise trophic interactions show how climate change can alter the dynamics of planktonic food webs with implications for carbon cycling in upper ocean ecosystems. 

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4. Bacteriophage specificity is impacted by interactions between bacteria

   https://doi.org/10.1128/msystems.01177-23  

   Bisesi, Ave T; Möbius, Wolfram; Nadell, Carey D; Hansen, Eleanore G; Bowden, Steven D; Harcombe, William R (March 2024, mSystems)

   Dyson, Zoe A (Ed.)

   ABSTRACT Predators play a central role in shaping community structure, function, and stability. The degree to which bacteriophage predators (viruses that infect bacteria) evolve to be specialists with a single bacterial prey species versus generalists able to consume multiple types of prey has implications for their effect on microbial communities. The presence and abundance of multiple bacterial prey types can alter selection for phage generalists, but less is known about how interactions between prey shape predator specificity in microbial systems. Using a phenomenological mathematical model of phage and bacterial populations, we find that the dominant phage strategy depends on prey ecology. Given a fitness cost for generalism, generalist predators maintain an advantage when prey species compete, while specialists dominate when prey are obligately engaged in cross-feeding interactions. We test these predictions in a synthetic microbial community with interacting strains ofEscherichia coliandSalmonella entericaby competing a generalist T5-like phage able to infect both prey against P22vir, anS. enterica-specific phage. Our experimental data conform to our modeling expectations when prey species are competing or obligately mutualistic, although our results suggest that thein vitrocost of generalism is caused by a combination of biological mechanisms not anticipated in our model. Our work demonstrates that interactions between bacteria play a role in shaping ecological selection on predator specificity in obligately lytic bacteriophages and emphasizes the diversity of ways in which fitness trade-offs can manifest. IMPORTANCEThere is significant natural diversity in how many different types of bacteria a bacteriophage can infect, but the mechanisms driving this diversity are unclear. This study uses a combination of mathematical modeling and anin vitrosystem consisting ofEscherichia coli,Salmonella enterica, a T5-like generalist phage, and the specialist phage P22virto highlight the connection between bacteriophage specificity and interactions between their potential microbial prey. Mathematical modeling suggests that competing bacteria tend to favor generalist bacteriophage, while bacteria that benefit each other tend to favor specialist bacteriophage. Experimental results support this general finding. The experiments also show that the optimal phage strategy is impacted by phage degradation and bacterial physiology. These findings enhance our understanding of how complex microbial communities shape selection on bacteriophage specificity, which may improve our ability to use phage to manage antibiotic-resistant microbial infections. 

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5. Predator feeding rates may often be unsaturated under typical prey densities

   https://doi.org/10.1111/ele.14151  

   Coblentz, Kyle E; Novak, Mark; DeLong, John P (February 2023, Ecology Letters)

   Abstract Predator feeding rates (described by their functional response) must saturate at high prey densities. Although thousands of manipulative functional response experiments show feeding rate saturation at high densities under controlled conditions, it remains unclearhowsaturated feeding rates are at natural prey densities. The general degree of feeding rate saturation has important implications for the processes determining feeding rates and how they respond to changes in prey density. To address this, we linked two databases—one of functional response parameters and one on mass–abundance scaling—through prey mass to calculate a feeding rate saturation index. We find that: (1) feeding rates may commonly be unsaturated and (2) the degree of saturation varies with predator and prey taxonomic identities and body sizes, habitat, interaction dimension and temperature. These results reshape our conceptualisation of predator–prey interactions in nature and suggest new research on the ecological and evolutionary implications of unsaturated feeding rates. 

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