Recently, several task-parallel programming models have emerged to address the high synchronization and load imbalance issues as well as data movement overheads in modern shared memory architectures. OpenMP, the most commonly used shared memory parallel programming model, has added task execution support with dataflow dependencies. HPX and Regent are two more recent runtime systems that also support the dataflow execution model and extend it to distributed memory environments. We focus on parallelization of sparse matrix computations on shared memory architectures. We evaluate the OpenMP, HPX and Regent runtime systems in terms of performance and ease of implementation, and compare them against the traditional BSP model for two popular eigensolvers, Lanczos and LOBPCG. We give a general outline in regards to achieving parallelism using these runtime systems, and present a heuristic for tuning their performance to balance tasking overheads with the degree of parallelism that can be exposed. We then demonstrate their merits on two architectures, Intel Broadwell (a multicore processor) and AMD EPYC (a modern manycore processor). We observe that these frameworks achieve up to 13.7 × fewer cache misses over an efficient BSP implementation across L1, L2 and L3 cache layers. They also obtain up to 9.9 × improvement in execution time over the same BSP implementation.
more »
« less
Infinity Stream: Portable and Programmer-Friendly In-/Near-Memory Fusion
In-memory computing with large last-level caches is promising to dramatically alleviate data movement bottlenecks and expose massive bitline-level parallelization opportunities. However, key challenges from its unique execution model remain unsolved: automated parallelization, transparently orchestrating data transposition/alignment/broadcast for bit-serial logic, and mixing in-/near-memory computing. Most importantly, the solution should be programmer friendly and portable across platforms.
Our key innovation is an execution model and intermediate representation (IR) that enables hybrid CPU-core, in-memory, and near-memory processing. Our IR is the tensor dataflow graph (tDFG), which is a unified representation of in-memory and near-memory computation. The tDFG exposes tensor-data structure information so that the hardware and runtime can automatically orchestrate data management for bitserial execution, including runtime data layout transformations. To enable microarchitecture portability, we use a two-phase, JIT-based compilation approach to dynamically lower the tDFG to in-memory commands.
Our design, infinity stream, is evaluated on a cycle-accurate simulator. Across data-processing workloads with fp32, it achieves 2.6× speedup and 75% traffic reduction over a state-of-the-art near-memory computing technique, with 2.4× energy efficiency.
more »
« less
- Award ID(s):
- 2200831
- NSF-PAR ID:
- 10410141
- Date Published:
- Journal Name:
- ASPLOS 2023: Proceedings of the 28th ACM International Conference on Architectural Support for Programming Languages and Operating Systems
- Volume:
- 3
- Issue:
- March
- Page Range / eLocation ID:
- 359 to 375
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
more » « less
Abstract Recent technological advances have contributed to the rapid increase in algorithmic complexity of applications, ranging from signal processing to autonomous systems. To control this complexity and endow heterogeneous computing systems with autonomous programming and optimization capabilities, we propose a
unified, end-to-end, programmable graph representation learning (PGL) framework that mines the complexity of high-level programs down to low-level virtual machine intermediate representation, extracts specific computational patterns, and predicts which code segments run best on a core in heterogeneous hardware. PGL extracts multifractal features from code graphs and exploits graph representation learning strategies for automatic parallelization and correct assignment to heterogeneous processors. The comprehensive evaluation of PGL on existing and emerging complex software demonstrates a 6.42x and 2.02x speedup compared to thread-based execution and state-of-the-art techniques, respectively. Our PGL framework leads to higher processing efficiency, which is crucial for future AI and high-performance computing applications such as autonomous vehicles and machine vision. -
Data movement between main memory and the CPU is a major bottleneck in parallel data-intensive applications. In response, researchers have proposed using compilers and intermediate representations (IRs) that apply optimizations such as loop fusion under existing high-level APIs such as NumPy and TensorFlow. Even though these techniques generally do not require changes to user applications, they require intrusive changes to the library itself: often, library developers must rewrite each function using a new IR. In this paper, we propose a new technique called split annotations (SAs) that enables key data movement optimizations over unmodified library functions. SAs only require developers to annotate functions and implement an API that specifies how to partition data in the library. The annotation and API describe how to enable cross-function data pipelining and parallelization, while respecting each function's correctness constraints. We implement a parallel runtime for SAs in a system called Mozart. We show that Mozart can accelerate workloads in libraries such as Intel MKL and Pandas by up to 15x, with no library modifications. Mozart also provides performance gains competitive with solutions that require rewriting libraries, and can sometimes outperform these systems by up to 2x by leveraging existing hand-optimized code.more » « less
-
Obeid, Iyad ; Selesnick, Ivan ; Picone, Joseph (Ed.)The goal of this work was to design a low-cost computing facility that can support the development of an open source digital pathology corpus containing 1M images [1]. A single image from a clinical-grade digital pathology scanner can range in size from hundreds of megabytes to five gigabytes. A 1M image database requires over a petabyte (PB) of disk space. To do meaningful work in this problem space requires a significant allocation of computing resources. The improvements and expansions to our HPC (highperformance computing) cluster, known as Neuronix [2], required to support working with digital pathology fall into two broad categories: computation and storage. To handle the increased computational burden and increase job throughput, we are using Slurm [3] as our scheduler and resource manager. For storage, we have designed and implemented a multi-layer filesystem architecture to distribute a filesystem across multiple machines. These enhancements, which are entirely based on open source software, have extended the capabilities of our cluster and increased its cost-effectiveness. Slurm has numerous features that allow it to generalize to a number of different scenarios. Among the most notable is its support for GPU (graphics processing unit) scheduling. GPUs can offer a tremendous performance increase in machine learning applications [4] and Slurm’s built-in mechanisms for handling them was a key factor in making this choice. Slurm has a general resource (GRES) mechanism that can be used to configure and enable support for resources beyond the ones provided by the traditional HPC scheduler (e.g. memory, wall-clock time), and GPUs are among the GRES types that can be supported by Slurm [5]. In addition to being able to track resources, Slurm does strict enforcement of resource allocation. This becomes very important as the computational demands of the jobs increase, so that they have all the resources they need, and that they don’t take resources from other jobs. It is a common practice among GPU-enabled frameworks to query the CUDA runtime library/drivers and iterate over the list of GPUs, attempting to establish a context on all of them. Slurm is able to affect the hardware discovery process of these jobs, which enables a number of these jobs to run alongside each other, even if the GPUs are in exclusive-process mode. To store large quantities of digital pathology slides, we developed a robust, extensible distributed storage solution. We utilized a number of open source tools to create a single filesystem, which can be mounted by any machine on the network. At the lowest layer of abstraction are the hard drives, which were split into 4 60-disk chassis, using 8TB drives. To support these disks, we have two server units, each equipped with Intel Xeon CPUs and 128GB of RAM. At the filesystem level, we have implemented a multi-layer solution that: (1) connects the disks together into a single filesystem/mountpoint using the ZFS (Zettabyte File System) [6], and (2) connects filesystems on multiple machines together to form a single mountpoint using Gluster [7]. ZFS, initially developed by Sun Microsystems, provides disk-level awareness and a filesystem which takes advantage of that awareness to provide fault tolerance. At the filesystem level, ZFS protects against data corruption and the infamous RAID write-hole bug by implementing a journaling scheme (the ZFS intent log, or ZIL) and copy-on-write functionality. Each machine (1 controller + 2 disk chassis) has its own separate ZFS filesystem. Gluster, essentially a meta-filesystem, takes each of these, and provides the means to connect them together over the network and using distributed (similar to RAID 0 but without striping individual files), and mirrored (similar to RAID 1) configurations [8]. By implementing these improvements, it has been possible to expand the storage and computational power of the Neuronix cluster arbitrarily to support the most computationally-intensive endeavors by scaling horizontally. We have greatly improved the scalability of the cluster while maintaining its excellent price/performance ratio [1].more » « less
-
Serverless computing is an increasingly attractive paradigm in the cloud due to its ease of use and fine-grained pay-for-what-you-use billing. However, serverless computing poses new challenges to system design due to its short-lived function execution model. Our detailed analysis reveals that memory management is responsible for a major amount of function execution cycles. This is because functions pay the full critical-path costs of memory management in both userspace and the operating system without the opportunity to amortize these costs over their short lifetimes. To address this problem, we propose Memento, a new hardware-centric memory management design based upon our insights that memory allocations in serverless functions are typically small, and either quickly freed after allocation or freed when the function exits. Memento alleviates the overheads of serverless memory management by introducing two key mechanisms: (i) a hardware object allocator that performs in-cache memory allocation and free operations based on arenas, and (ii) a hardware page allocator that manages a small pool of physical pages used to replenish arenas of the object allocator. Together these mechanisms alleviate memory management overheads and bypass costly userspace and kernel operations. Memento naturally integrates with existing software stacks through a set of ISA extensions that enable seamless integration with multiple languages runtimes. Finally, Memento leverages the newly exposed memory allocation semantics in hardware to introduce a main memory bypass mechanism and avoid unnecessary DRAM accesses for newly allocated objects. We evaluate Memento with full-system simulations across a diverse set of containerized serverless workloads and language runtimes. The results show that Memento achieves function execution speedups ranging between 8–28% and 16% on average. Furthermore, Memento hardware allocators and main memory bypass mechanisms drastically reduce main memory traffic by 30% on average. The combined effects of Memento reduce the pricing cost of function execution by 29%. Finally, we demonstrate the applicability of Memento beyond functions, to major serverless platform operations and long-running data processing applications.more » « less
- Free Publicly Accessible Full Text
-
Accepted Manuscript1.0
- Conference Paper:
- https://doi.org/10.1145/3582016.3582032
