skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Attention:

The NSF Public Access Repository (PAR) system and access will be unavailable from 11:00 PM ET on Friday, July 11 until 2:00 AM ET on Saturday, July 12 due to maintenance. We apologize for the inconvenience.


Title: Trophically integrated ecometric models as tools for demonstrating spatial and temporal functional changes in mammal communities
We are in a modern biodiversity crisis that will restructure community compositions and ecological functions globally. Large mammals, important contributors to ecosystem function, have been affected directly by purposeful extermination and indirectly by climate and land-use changes, yet functional turnover is rarely assessed on a global scale using metrics based on functional traits. Using ecometrics, the study of functional trait distributions and functional turnover, we examine the relationship between vegetation cover and locomotor traits for artiodactyl and carnivoran communities. We show that the ability to detect a functional relationship is strengthened when locomotor traits of both primary consumers (artiodactyls, n = 157 species) and secondary consumers (carnivorans, n = 138 species) are combined into one trophically integrated ecometric model. Overall, locomotor traits of 81% of communities accurately estimate vegetation cover, establishing the advantage of trophically integrated ecometric models over single-group models (58 to 65% correct). We develop an innovative approach within the ecometrics framework, using ecometric anomalies to evaluate mismatches in model estimates and observed values and provide more nuance for understanding relationships between functional traits and vegetation cover. We apply our integrated model to five paleontological sites to illustrate mismatches in the past and today and to demonstrate the utility of the model for paleovegetation interpretations. Observed changes in community traits and their associated vegetations across space and over time demonstrate the strong, rapid effect of environmental filtering on community traits. Ultimately, our trophically integrated ecometric model captures the cascading interactions between taxa, traits, and changing environments.  more » « less
Award ID(s):
1945013 2124770 2124836
PAR ID:
10413860
Author(s) / Creator(s):
; ; ;
Date Published:
Journal Name:
Proceedings of the National Academy of Sciences
Volume:
120
Issue:
7
ISSN:
0027-8424
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Abstract AimWe investigate locomotor function in artiodactyls, represented by calcaneal gear ratio, as it relates to multiple environments. Using an ecometric approach, we develop a trait–environment model to investigate ecosystem‐level changes through time and to reconstruct past environments. We apply the trait–environment model to a case study of six sites in Kenya to evaluate changes over the past 100 years. LocationGlobal. MethodsLocomotor morphology was represented by calcaneal gear ratios measured as the overall length of a calcaneum divided by length of its in‐lever, that is calcaneal tuber. We collected calcaneal gear ratio measurements from skeletal specimens of 157 artiodactyl species in museum collections and used species’ spatial distributions to determine the composition of 47,420 communities globally. For 21,827 communities with three or more species of artiodactyls, we used maximum likelihood to model ecometric relationships between community‐level locomotor morphology and five environmental variables, including mean annual temperature, annual precipitation, elevation, vegetation cover and ecoregion province. ResultsCommunity mean gear ratios range from 1.43 to 1.56 (µ = 1.50). Mean gear ratios are highest in the tropical regions and lowest in the mid‐latitudes. Variance in mean calcaneal gear ratio is related to ecoregion division (68.6%), vegetation cover (63.5%) and precipitation (60.7%). In a case study of Kenyan sites, we demonstrate habitat homogenization patterns that match mammal community turnover patterns. Main conclusionsWith this ecometric framework, fossils of artiodactyl post‐crania can be used to assist in interpreting past ecoregion, vegetation cover and precipitation for a more comprehensive understanding of palaeoenvironment. These relationships between functional traits and environment will enable better models of biotic responses for conservation of functional diversity under changing environments. 
    more » « less
  2. Ecosystem function relies in part on aligned relationships between functional traits of animals and the environments in which they live. Studies of trait-environment relationships have largely focused on communities of native species, but domestic and non-native species also play a role in the functioning of modern ecosystems. We use ecometrics, or study of functional trait-environment relationships, to evaluate the impact of domestic and non-native species on community-level trait composition and its relationship with precipitation by comparing four community compositions: modern native, modern native plus domestic, modern native plus non-native, and late Pleistocene (0.126–0.0117 Ma). We integrate large and small herbivorous mammals into a single ecometric model of hypsodonty (i.e., tooth crown height) and annual precipitation (n=8439, r=-0.7, R2=0.4, p<0.001). We hypothesize: 1) ecometric models of modern native communities will differ from those for late Pleistocene communities, 2) inclusion of domestic species will align ecometric relationships with those from the late Pleistocene, 3) inclusion of non-native species will maintain ecometric relationships of modern native communities. We found modern communities of native species have lower hypsodonty values and higher precipitation estimates than late Pleistocene communities. Domestic species shift modern communities toward higher hypsodonty values and lower precipitation estimates like those in the late Pleistocene. Today’s domestics are mostly high-crowned grazing species representative of the fauna lost prior to the Holocene. Non-native species do not shift modern native trait composition or the associated precipitation estimates, illustrating the success of non-native species due to trait alignment with their new environments. Thus, conservation and restoration efforts should consider trait composition of whole communities because it provides unique information to measures of taxonomic composition. 
    more » « less
  3. This is data for vegetation canopy cover measured from each of the SMES study plots. Vegetation canopy cover was measured from each of the 36 one-meter2 quadrats twice each year. Animal consumers have important roles in ecosystems, determining plant species composition and structure, regulating rates of plant production and nutrient, and altering soil structure and chemistry. The purpose of this study is to determine whether or not the activities of small mammals regulate plant community structure, plant species diversity, and spatial vegetation patterns in Chihuahuan Desert shrublands and grasslands. The purpose of this study is to determine whether or not the activities of small mammals regulate plant community structure, plant species diversity, and spatial vegetation patterns in Chihuahuan Desert shrublands and grasslands. What role if any do indigenous small mammal consumers have in maintaining desertified landscapes in the Chihuahuan Desert? Additionally, how do the effects of small mammals interact with changing climate to affect vegetation patterns over time? This study will provide long-term experimental tests of the roles of consumers on ecosystem pattern and process across a latitudinal climate gradient. The following questions or hypotheses will be addressed. 1) Do small mammals influence patterns of plant species composition and diversity, vegetation structure, and spatial patterns of vegetation canopy cover and biomass in Chihuahuan Desert shrublands and grasslands? Are small mammals keystone species that determine plant species composition and physiognomy of Chihuahuan Desert communities? Do small mammals have a significant role in maintaining the existence of shrub islands and spatial heterogeneity of creosotebush shrub communities? 2) Do small mammals affect the taxonomic composition and spatial pattern of vegetation similarly or differently in grassland communities as compared to shrub communities? How do patterns compare between grassland and shrubland sites, and how do these relatively small scale patterns relate to overall landscape vegetation patterns? 3) Do small mammals interact with short-term (annual) and long-term (decades) climate change to affect temporal changes in vegetation spatial patterns and species composition? 4) Do small mammals interact with other herbivore and granivore consumers enough to affect the species composition and abundances of other consumers such as ants and grasshoppers? 
    more » « less
  4. Ecometric analyses use the relationships between functional traits and the environment at the community level to quantitatively estimate past climatic and environmental variables at fossil sites. Hypsodonty (tooth crown height) in North American rodent and lagomorph (Glires) communities is correlated with mean annual temperature and annual precipitation. Here, we examine the community hypsodonty of African Glires to test if this relationship translates to a continent with more extreme climates and to quantify paleoprecipitation at important fossil sites. Categorical hypsodonty values were gathered from the literature and museum collections for 94 modern African taxa (88%). We used maximum likelihood to model the ecometric relationship between hypsodonty and annual precipitation. We then produced trait-based estimates of paleoprecipitation for 26 well sampled fossil localities from eastern Africa over the last 5.7 Ma. We confirmed other regional studies by identifying increasing aridity and decreasing annual precipitation (824 mm to 480 mm) in the Late Miocene of Kenya. From the Ethiopian Shungura Formation, we estimated temporal fluctuations in precipitation that correspond with the presence or absence of paleolakes and rivers. Small mammal community hypsodonty illustrates that east African communities have converged towards mesodont means and high standard deviations in response to climate change. 
    more » « less
  5. Abstract AimClimate change is transforming mountain summit plant communities worldwide, but we know little about such changes in the High Andes. Understanding large‐scale patterns of vegetation changes across the Andes, and the factors driving these changes, is fundamental to predicting the effects of global warming. We assessed trends in vegetation cover, species richness (SR) and community‐level thermal niches (CTN) and tested whether they are explained by summits' climatic conditions and soil temperature trends. LocationHigh Andes. Time periodBetween 2011/2012 and 2017/2019. Major taxa studiedVascular plants. MethodsUsing permanent vegetation plots placed on 45 mountain summits and soil temperature loggers situated along a ~6800 km N‐S gradient, we measured species and their relative percentage cover and estimated CTN in two surveys (intervals between 5 and 8 years). We then estimated the annual rate of changes for the three variables and used generalized linear models to assess their relationship with annual precipitation, the minimum air temperatures of each summit and rates of change in the locally recorded soil temperatures. ResultsOver time, there was an average loss of vegetation cover (mean = −0.26%/yr), and a gain in SR across summits (mean = 0.38 species m2/yr), but most summits had significant increases in SR and vegetation cover. Changes in SR were positively related to minimum air temperature and soil temperature rate of change. Most plant communities experienced shifts in their composition by including greater abundances of species with broader thermal niches and higher optima. However, the measured changes in soil temperature did not explain the observed changes in CTN. Main conclusionsHigh Andean vegetation is changing in cover and SR and is shifting towards species with wider thermal niche breadths. The weak relationship with soil temperature trends could have resulted from the short study period that only marginally captures changes in vegetation through time. 
    more » « less