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1. Trait-Based Investigation Reveals Patterns of Community Response to Nutrient Enrichment in Coastal Mesic Grassland

   https://doi.org/10.3390/d13010019  

   Brown, Joseph K.; Zinnert, Julie C. (January 2021, Diversity)

   null (Ed.)

   Despite recent advances, we still do not understand how chronic nutrient enrichment impacts coastal plant community structure and function. We aimed to clarify such impacts by testing for differences in ecosystem productivity and multiple community metrics in response to fertilization. We established plots in 2015 consisting of control (C), nitrogen (N), phosphorus (P), and nitrogen + phosphorus (NP) treatments in a mid-Atlantic coastal grassland. In 2017 we collected aboveground biomass, functional traits, and species abundance for each plot. Our findings indicate a synergistic co-limitation, such that NP plots were more productive than all other treatments. A combination of traits responsible for competition and nutrient uptake (i.e., height and δ15N) caused trait-based divergence of N and NP plots from C and P plots. Functional trait-based composition patterns differed from species composition and lifeform abundance patterns, highlighting complexities of community response to nutrient enrichment. While trait-based functional alpha-diversity did not differ among nutrient treatments, it was positively correlated with biomass production, suggesting nutrients may impact functional alpha-diversity indirectly through increased productivity. Increased functional alpha-diversity could be a mechanism of co-existence emerging as productivity increases. These results have important implications for understanding how plant communities in low-productivity coastal systems are altered by fertilization. 

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2. Root-associated fungal communities exposed to experimental drought

   https://doi.org/10.6073/pasta/f530f48c02d152590057d20febe47e31  

   Lagueux, Devon E (January 2020, Environmental Data Initiative)

   Plant-associated fungi can ameliorate abiotic stress in their hosts, and changes in these fungal communities can alter plant productivity, species interactions, community structure and ecosystem processes. We investigated the response of root-associated fungi to experimental drought (66% reduction in growing season precipitation) across six North American grassland ecosystem types to determine how extreme drought alters root-associated fungi, and understand what abiotic factors influence root fungal community composition across grassland ecosystems. Next generation sequencing of the fungal ITS2 region demonstrated that drought primarily re-ordered fungal species’ relative abundances within host plant species, with different fungal responses depending on host identity. Grass species that declined more under drought trended toward less community re-ordering of root fungi than species less sensitive to drought. Host identity and grassland ecosystem type defined the magnitude of drought effects on community composition, diversity, and root colonization, and the most important factor affecting fungal composition was plant species identity. 

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3. Long-Term Nutrient Enrichment of an Oligotroph-Dominated Wetland Increases Bacterial Diversity in Bulk Soils and Plant Rhizospheres

   https://doi.org/10.1128/mSphere.00035-20  

   Bledsoe, Regina B.; Goodwillie, Carol; Peralta, Ariane L. (June 2020, mSphere)

   Campbell, Barbara J. (Ed.)

   ABSTRACT In nutrient-limited conditions, plants rely on rhizosphere microbial members to facilitate nutrient acquisition, and in return, plants provide carbon resources to these root-associated microorganisms. However, atmospheric nutrient deposition can affect plant-microbe relationships by changing soil bacterial composition and by reducing cooperation between microbial taxa and plants. To examine how long-term nutrient addition shapes rhizosphere community composition, we compared traits associated with bacterial (fast-growing copiotrophs, slow-growing oligotrophs) and plant (C 3 forb, C 4 grass) communities residing in a nutrient-poor wetland ecosystem. Results revealed that oligotrophic taxa dominated soil bacterial communities and that fertilization increased the presence of oligotrophs in bulk and rhizosphere communities. Additionally, bacterial species diversity was greatest in fertilized soils, particularly in bulk soils. Nutrient enrichment (fertilized versus unfertilized) and plant association (bulk versus rhizosphere) determined bacterial community composition; bacterial community structure associated with plant functional group (grass versus forb) was similar within treatments but differed between fertilization treatments. The core forb microbiome consisted of 602 unique taxa, and the core grass microbiome consisted of 372 unique taxa. Forb rhizospheres were enriched in potentially disease-suppressive bacterial taxa, and grass rhizospheres were enriched in bacterial taxa associated with complex carbon decomposition. Results from this study demonstrate that fertilization serves as a strong environmental filter on the soil microbiome, which leads to distinct rhizosphere communities and can shift plant effects on the rhizosphere microbiome. These taxonomic shifts within plant rhizospheres could have implications for plant health and ecosystem functions associated with carbon and nitrogen cycling. IMPORTANCE Over the last century, humans have substantially altered nitrogen and phosphorus cycling. Use of synthetic fertilizer and burning of fossil fuels and biomass have increased nitrogen and phosphorus deposition, which results in unintended fertilization of historically low-nutrient ecosystems. With increased nutrient availability, plant biodiversity is expected to decline, and the abundance of copiotrophic taxa is anticipated to increase in bacterial communities. Here, we address how bacterial communities associated with different plant functional types (forb, grass) shift due to long-term nutrient enrichment. Unlike other studies, results revealed an increase in bacterial diversity, particularly of oligotrophic bacteria in fertilized plots. We observed that nutrient addition strongly determines forb and grass rhizosphere composition, which could indicate different metabolic preferences in the bacterial communities. This study highlights how long-term fertilization of oligotroph-dominated wetlands could alter diversity and metabolism of rhizosphere bacterial communities in unexpected ways. 

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4. Effects of Multiple Resource Additions on Community and Ecosystem Processes: NutNet NPP Quadrat Sampling at the Sevilleta National Wildlife Refuge, New Mexico

   https://doi.org/10.6073/pasta/a5683384cff200de7e0f6b651c60d8d6  

   Baur, Lauren; Collins, Scott; Muldavin, Esteban; Rudgers, Jennifer A; Pockman, William T. (January 2021, Environmental Data Initiative)

   Two of the most pervasive human impacts on ecosystems are alteration of global nutrient budgets and changes in the abundance and identity of consumers. Fossil fuel combustion and agricultural fertilization have doubled and quintupled, respectively, global pools of nitrogen and phosphorus relative to pre-industrial levels. In spite of the global impacts of these human activities, there have been no globally coordinated experiments to quantify the general impacts on ecological systems. This experiment seeks to determine how nutrient availability controls plant biomass, diversity, and species composition in a desert grassland. This has important implications for understanding how future atmospheric deposition of nutrients (N, S, Ca, K) might affect community and ecosystem-level responses. This study is part of a larger coordinated research network that includes more than 40 grassland sites around the world. By using a standardized experimental setup that is consistent across all study sites, we are addressing the questions of whether diversity and productivity are co-limited by multiple nutrients and if so, whether these trends are predictable on a global scale. 

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5. Grassland ecosystem type drives AM fungal diversity and functional guild distribution in North American grasslands

   https://doi.org/10.1111/mec.16823  

   Kasanke, Christopher P.; Zhao, Qian; Alfaro, Trinidad; Walter, Christopher A.; Hobbie, Sarah E.; Cheeke, Tanya E.; Hofmockel, Kirsten S. (March 2023, Molecular Ecology)

   Abstract Nutrient exchange forms the basis of the ancient symbiotic relationship that occurs between most land plants and arbuscular mycorrhizal (AM) fungi. Plants provide carbon (C) to AM fungi and fungi provide the plant with nutrients such as nitrogen (N) and phosphorous (P). Nutrient addition can alter this symbiotic coupling in key ways, such as reducing AM fungal root colonization and changing the AM fungal community composition. However, environmental parameters that differentiate ecosystems and drive plant distribution patterns (e.g., pH, moisture), are also known to impact AM fungal communities. Identifying the relative contribution of environmental factors impacting AM fungal distribution patterns is important for predicting biogeochemical cycling patterns and plant‐microbe relationships across ecosystems. To evaluate the relative impacts of local environmental conditions and long‐term nutrient addition on AM fungal abundance and composition across grasslands, we studied experimental plots amended for 10 years with N, P, or N and P fertilizer in different grassland ecosystem types, including tallgrass prairie, montane, shortgrass prairie, and desert grasslands. Contrary to our hypothesis, we found ecosystem type, not nutrient treatment, was the main driver of AM fungal root colonization, diversity, and community composition, even when accounting for site‐specific nutrient limitations. We identified several important environmental drivers of grassland ecosystem AM fungal distribution patterns, including aridity, mean annual temperature, root moisture, and soil pH. This work provides empirical evidence for niche partitioning strategies of AM fungal functional guilds and emphasizes the importance of long‐term, large scale research projects to provide ecologically relevant context to nutrient addition studies. 

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