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1. Trait-Based Investigation Reveals Patterns of Community Response to Nutrient Enrichment in Coastal Mesic Grassland

   https://doi.org/10.3390/d13010019  

   Brown, Joseph K.; Zinnert, Julie C. (January 2021, Diversity)

   null (Ed.)

   Despite recent advances, we still do not understand how chronic nutrient enrichment impacts coastal plant community structure and function. We aimed to clarify such impacts by testing for differences in ecosystem productivity and multiple community metrics in response to fertilization. We established plots in 2015 consisting of control (C), nitrogen (N), phosphorus (P), and nitrogen + phosphorus (NP) treatments in a mid-Atlantic coastal grassland. In 2017 we collected aboveground biomass, functional traits, and species abundance for each plot. Our findings indicate a synergistic co-limitation, such that NP plots were more productive than all other treatments. A combination of traits responsible for competition and nutrient uptake (i.e., height and δ15N) caused trait-based divergence of N and NP plots from C and P plots. Functional trait-based composition patterns differed from species composition and lifeform abundance patterns, highlighting complexities of community response to nutrient enrichment. While trait-based functional alpha-diversity did not differ among nutrient treatments, it was positively correlated with biomass production, suggesting nutrients may impact functional alpha-diversity indirectly through increased productivity. Increased functional alpha-diversity could be a mechanism of co-existence emerging as productivity increases. These results have important implications for understanding how plant communities in low-productivity coastal systems are altered by fertilization. 

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2. Root-associated fungal communities exposed to experimental drought

   https://doi.org/10.6073/pasta/f530f48c02d152590057d20febe47e31  

   Lagueux, Devon E (January 2020, Environmental Data Initiative)

   Plant-associated fungi can ameliorate abiotic stress in their hosts, and changes in these fungal communities can alter plant productivity, species interactions, community structure and ecosystem processes. We investigated the response of root-associated fungi to experimental drought (66% reduction in growing season precipitation) across six North American grassland ecosystem types to determine how extreme drought alters root-associated fungi, and understand what abiotic factors influence root fungal community composition across grassland ecosystems. Next generation sequencing of the fungal ITS2 region demonstrated that drought primarily re-ordered fungal species’ relative abundances within host plant species, with different fungal responses depending on host identity. Grass species that declined more under drought trended toward less community re-ordering of root fungi than species less sensitive to drought. Host identity and grassland ecosystem type defined the magnitude of drought effects on community composition, diversity, and root colonization, and the most important factor affecting fungal composition was plant species identity. 

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3. Long-Term Nutrient Enrichment of an Oligotroph-Dominated Wetland Increases Bacterial Diversity in Bulk Soils and Plant Rhizospheres

   https://doi.org/10.1128/mSphere.00035-20  

   Bledsoe, Regina B.; Goodwillie, Carol; Peralta, Ariane L. (June 2020, mSphere)

   Campbell, Barbara J. (Ed.)

   ABSTRACT In nutrient-limited conditions, plants rely on rhizosphere microbial members to facilitate nutrient acquisition, and in return, plants provide carbon resources to these root-associated microorganisms. However, atmospheric nutrient deposition can affect plant-microbe relationships by changing soil bacterial composition and by reducing cooperation between microbial taxa and plants. To examine how long-term nutrient addition shapes rhizosphere community composition, we compared traits associated with bacterial (fast-growing copiotrophs, slow-growing oligotrophs) and plant (C 3 forb, C 4 grass) communities residing in a nutrient-poor wetland ecosystem. Results revealed that oligotrophic taxa dominated soil bacterial communities and that fertilization increased the presence of oligotrophs in bulk and rhizosphere communities. Additionally, bacterial species diversity was greatest in fertilized soils, particularly in bulk soils. Nutrient enrichment (fertilized versus unfertilized) and plant association (bulk versus rhizosphere) determined bacterial community composition; bacterial community structure associated with plant functional group (grass versus forb) was similar within treatments but differed between fertilization treatments. The core forb microbiome consisted of 602 unique taxa, and the core grass microbiome consisted of 372 unique taxa. Forb rhizospheres were enriched in potentially disease-suppressive bacterial taxa, and grass rhizospheres were enriched in bacterial taxa associated with complex carbon decomposition. Results from this study demonstrate that fertilization serves as a strong environmental filter on the soil microbiome, which leads to distinct rhizosphere communities and can shift plant effects on the rhizosphere microbiome. These taxonomic shifts within plant rhizospheres could have implications for plant health and ecosystem functions associated with carbon and nitrogen cycling. IMPORTANCE Over the last century, humans have substantially altered nitrogen and phosphorus cycling. Use of synthetic fertilizer and burning of fossil fuels and biomass have increased nitrogen and phosphorus deposition, which results in unintended fertilization of historically low-nutrient ecosystems. With increased nutrient availability, plant biodiversity is expected to decline, and the abundance of copiotrophic taxa is anticipated to increase in bacterial communities. Here, we address how bacterial communities associated with different plant functional types (forb, grass) shift due to long-term nutrient enrichment. Unlike other studies, results revealed an increase in bacterial diversity, particularly of oligotrophic bacteria in fertilized plots. We observed that nutrient addition strongly determines forb and grass rhizosphere composition, which could indicate different metabolic preferences in the bacterial communities. This study highlights how long-term fertilization of oligotroph-dominated wetlands could alter diversity and metabolism of rhizosphere bacterial communities in unexpected ways. 

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4. Diversity‐dependent soil acidification under nitrogen enrichment constrains biomass productivity

   https://doi.org/10.1111/gcb.15329  

   Kimmel, Kaitlin; Furey, George N.; Hobbie, Sarah E.; Isbell, Forest; Tilman, David; Reich, Peter B. (September 2020, Global Change Biology)

   Abstract In most plant communities, the net effect of nitrogen enrichment is an increase in plant productivity. However, nitrogen enrichment also has been shown to decrease species richness and to acidify soils, each of which may diminish the long‐term impact of nutrient enrichment on productivity. Here we use a long‐term (20 year) grassland plant diversity by nitrogen enrichment experiment in Minnesota, United States (a subexperiment within the BioCON experiment) to quantify the net impacts of nitrogen enrichment on productivity, including its potential indirect effects on productivity via changes in species richness and soil pH over an experimental diversity gradient. Overall, we found that nitrogen enrichment led to an immediate positive increment in productivity, but that this effect became nonsignificant over later years of the experiment, with the difference in productivity between fertilized and unfertilized plots decreasing in proportion to nitrogen addition‐dependent declines in soil pH and losses of plant diversity. The net effect of nitrogen enrichment on productivity could have been 14.5% more on average over 20 years in monocultures if not for nitrogen‐induced decreases in pH and about 28.5% more on average over 20 years in 16 species communities if not for nitrogen‐induced species richness losses. Together, these results suggest that the positive effects of nutrient enrichment on biomass production can diminish in their magnitude over time, especially because of soil acidification in low diversity communities and especially because of plant diversity loss in initially high diversity communities. 

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5. Effects of 10 yr of nitrogen and phosphorus fertilization on carbon and nutrient cycling in a tidal freshwater marsh

   https://doi.org/10.1002/lno.11411  

   Herbert, Ellen R.; Schubauer‐Berigan, Joseph P.; Craft, Christopher B. (January 2020, Limnology and Oceanography)

   Abstract Tidal freshwater marshes can protect downstream ecosystems from eutrophication by intercepting excess nutrient loads, but recent studies in salt marshes suggest nutrient loading compromises their structural and functional integrity. Here, we present data on changes in plant biomass, microbial biomass and activity, and soil chemistry from plots in a tidal freshwater marsh on the Altamaha River (GA) fertilized for 10 yr with nitrogen (+N), phosphorus (+P), or nitrogen and phosphorus (+NP). Nitrogen alone doubled aboveground biomass and enhanced microbial activity, specifically rates of potential nitrification, denitrification, and methane production measured in laboratory incubations. Phosphorus alone increased soil P and doubled microbial biomass but did not affect microbial processes. Nitrogen or P alone decreased belowground biomass and soil carbon (C) whereas +NP increased aboveground biomass, microbial biomass and N cycling, and N, P, and C assimilation and burial more than either nutrient alone. Our findings suggest differential nutrient limitation of tidal freshwater macrophytes by N and microbes by P, similar to what has been observed in salt marshes. Macrophytes outcompete microbes for P in response to long‐term N and P additions, leading to increased soil C storage through increased inputs of belowground biomass relative to N and P added singly. The susceptibility of tidal freshwater marshes to long‐term nutrient enrichment and, hence their ability to mitigate eutrophication will depend on the quantity and relative proportion of N vs. P entering estuaries and tidal wetlands. 

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