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Abstract Primary production is fundamental to ecosystems, and in many extreme environments production is facilitated by microbial mats. Microbial mats are complex assemblages of photo- and heterotrophic microorganisms colonizing sediment and soil surfaces. These communities are the dominant producers of the McMurdo Dry Valleys, Antarctica, where they occupy lentic and lotic environments as well as intermittently wet soils. While the influence of microbial mats on stream nutrient dynamics and lake organic matter cycling is well documented, the influence of microbial mats on underlying soil is less well understood, particularly the effects of microbial mat nitrogen and carbon fixation. Taylor Valley soils occur across variable levels of inorganic phosphorus availability, with the Ross Sea drift containing four times that of the Taylor drifts, providing opportunities to examine how soil geochemistry influences microbial mats and the ecological functions they regulate. We found that inorganic phosphorus availability is positively correlated with microbial mat biomass, pigment concentration and nitrogen fixation potential. Additionally, our results demonstrate that dense microbial mats influence the ecological functioning of underlying soils by enriching organic carbon and total nitrogen stocks (two times higher). This work contributes to ongoing questions regarding the sources of energy fuelling soil food webs and the regional carbon balance in the McMurdo Dry Valleys.
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Genomic and phenotypic characterization of a red-pigmented strain of Massilia frigida isolated from an Antarctic microbial mat
The McMurdo Dry Valleys of Antarctica experience a range of selective pressures, including extreme seasonal variation in temperature, water and nutrient availability, and UV radiation. Microbial mats in this ecosystem harbor dense concentrations of biomass in an otherwise desolate environment. Microbial inhabitants must mitigate these selective pressures via specialized enzymes, changes to the cellular envelope, and the production of secondary metabolites, such as pigments and osmoprotectants. Here, we describe the isolation and characterization of a Gram-negative, rod-shaped, motile, red-pigmented bacterium, strain DJPM01, from a microbial mat within the Don Juan Pond Basin of Wright Valley. Analysis of strain DJMP01’s genome indicates it can be classified as a member of the Massilia frigida species. The genome contains several genes associated with cold and salt tolerance, including multiple RNA helicases, protein chaperones, and cation/proton antiporters. In addition, we identified 17 putative secondary metabolite gene clusters, including a number of nonribosomal peptides and ribosomally synthesized and post-translationally modified peptides (RiPPs), among others, and the biosynthesis pathway for the antimicrobial pigment prodigiosin. When cultivated on complex agar, multiple prodiginines, including the antibiotic prodigiosin, 2-methyl-3-propyl-prodiginine, 2-methyl-3-butyl-prodiginine, 2-methyl-3-heptyl-prodiginine, and cycloprodigiosin, were detected by LC–MS. Genome analyses of sequenced members of the Massilia genus indicates prodigiosin production is unique to Antarctic strains. UV-A radiation, an ecological stressor in the Antarctic, was found to significantly decrease the abundance of prodiginines produced by strain DJPM01. Genomic and phenotypic evidence indicates strain DJPM01 can respond to the ecological conditions of the DJP microbial mat, with prodiginines produced under a range of conditions, including extreme UV radiation.
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- PAR ID:
- 10428159
- Publisher / Repository:
- Frontiers
- Date Published:
- Journal Name:
- Frontiers in Microbiology
- Volume:
- 14
- ISSN:
- 1664-302X
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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- Free Publicly Accessible Full Text
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Accepted Manuscript1.0
- Journal Article:
- https://doi.org/10.3389/fmicb.2023.1156033
