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1. Mechanistic Model for the Coexistence of Nitrogen Fixation and Photosynthesis in Marine Trichodesmium

   https://doi.org/10.1128/mSystems.00210-19  

   Inomura, Keisuke; Wilson, Samuel T.; Deutsch, Curtis (August 2019, mSystems)

   Gilbert, Jack (Ed.)

   ABSTRACT The cyanobacterium Trichodesmium is an important contributor of new nitrogen (N) to the surface ocean, but its strategies for protecting the nitrogenase enzyme from inhibition by oxygen (O 2 ) remain poorly understood. We present a dynamic physiological model to evaluate hypothesized conditions that would allow Trichodesmium to carry out its two conflicting metabolic processes of N 2 fixation and photosynthesis. First, the model indicates that managing cellular O 2 to permit N 2 fixation requires high rates of respiratory O 2 consumption. The energetic cost amounts to ∼80% of daily C fixation, comparable to the observed diminution of the growth rate of Trichodesmium relative to other phytoplankton. Second, by forming a trichome of connected cells, Trichodesmium can segregate N 2 fixation from photosynthesis. The transfer of stored C to N-fixing cells fuels the respiratory O 2 consumption that protects nitrogenase, while the reciprocal transfer of newly fixed N to C-fixing cells supports cellular growth. Third, despite Trichodesmium lacking the structural barrier found in heterocystous species, the model predicts low diffusivity of cell membranes, a function that may be explained by the presence of Gram-negative membrane, production of extracellular polysaccharide substances (EPS), and “buffer cells” that intervene between N 2 -fixing and photosynthetic cells. Our results suggest that all three factors—respiratory protection, trichome formation, and diffusion barriers—represent essential strategies that, despite their energetic costs, facilitate the growth of Trichodesmium in the oligotrophic aerobic ocean and permit it to be a major source of new reactive nitrogen. IMPORTANCE Trichodesmium is a major nitrogen-fixing cyanobacterium and exerts a significant influence on the oceanic nitrogen cycle. It is also a widely used model organism in laboratory studies. Since the nitrogen-fixing enzyme nitrogenase is extremely sensitive to oxygen, how these surface-dwelling plankton manage the two conflicting processes of nitrogen fixation and photosynthesis has been a long-standing question. In this study, we developed a simple model of metabolic fluxes of Trichodesmium capturing observed daily cycles of photosynthesis, nitrogen fixation, and boundary layer oxygen concentrations. The model suggests that forming a chain of cells for spatially segregating nitrogen fixation and photosynthesis is essential but not sufficient. It also requires a barrier against oxygen diffusion and high rates of oxygen scavenging by respiration. Finally, the model indicates an extremely short life span of oxygen-enabling cells to instantly create a low-oxygen environment upon deactivation of photosynthesis. 

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2. Cell-specific measurements show nitrogen fixation by particle-attached putative non-cyanobacterial diazotrophs in the North Pacific Subtropical Gyre

   https://doi.org/10.1038/s41467-022-34585-y  

   Harding, Katie J.; Turk-Kubo, Kendra A.; Mak, Esther Wing; Weber, Peter K.; Mayali, Xavier; Zehr, Jonathan P. (December 2022, Nature Communications)

   Abstract Biological nitrogen fixation is a major important source of nitrogen for low-nutrient surface oceanic waters. Nitrogen-fixing (diazotrophic) cyanobacteria are believed to be the primary contributors to this process, but the contribution of non-cyanobacterial diazotrophic organisms in oxygenated surface water, while hypothesized to be important, has yet to be demonstrated. In this study, we used simultaneous 15 N-dinitrogen and 13 C-bicarbonate incubations combined with nanoscale secondary ion mass spectrometry analysis to screen tens of thousands of mostly particle-associated, cell-like regions of interest collected from the North Pacific Subtropical Gyre. These dual isotope incubations allow us to distinguish between non-cyanobacterial and cyanobacterial nitrogen-fixing microorganisms and to measure putative cell-specific nitrogen fixation rates. With this approach, we detect nitrogen fixation by putative non-cyanobacterial diazotrophs in the oxygenated surface ocean, which are associated with organic-rich particles (<210 µm size fraction) at two out of seven locations sampled. When present, up to 4.1% of the analyzed particles contain at least one active putative non-cyanobacterial diazotroph. The putative non-cyanobacterial diazotroph nitrogen fixation rates (0.76 ± 1.60 fmol N cell −1 d −1 ) suggest that these organisms are capable of fixing dinitrogen in oxygenated surface water, at least when attached to particles, and may contribute to oceanic nitrogen fixation. 

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3. Amazon River influence on nitrogen fixation in the western tropical North Atlantic

   https://doi.org/10.1357/002224019828474278  

   Montoya, Joseph P; Landrum, Jason P; Weber, Sarah C. (December 2019, Journal of marine research)

   We measured rates of N- and C-fixation with a direct tracer method in regions of the western tropical North Atlantic influenced by the Amazon River plume during the high flow period of 2010 (May–June 2010). We found distinct regional variations in N-fixation activity, with the lowest rates in the plume proper and the highest rates in the plume margins and in offshore waters. A comparison of our N- and C-fixation measurements showed that the relative contribution of N-fixation to total primary production increased from the plume core toward oceanic waters, and that most of the C-fixation in this system was supported by sources of nitrogen other than those derived from biological N-fixation, or diazotrophy. We complemented these rate experiments with measurements of the δ15N of suspended particles (δ15PN), which documented the important and often dominant role of diazotrophs in supplying nitrogen to particulate organic matter in the water column. These coupled measurements revealed that small phytoplankton contributed more new nitrogen to the particulate nitrogen pool than larger phytoplankton. We used a habitat classification method to assess the fac- tors that control diazotrophic activity and contribution to the suspended particle pool, both of which increased from the plume toward oceanic waters. Our findings provide an important constraint on the role of the Amazon plume in creating distinct niches and roles for diazotrophs in the nutrient and carbon budgets of the western tropical North Atlantic. 

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4. Rates and controls of nitrogen fixation in postfire lodgepole pine forests

   https://doi.org/10.1002/ecy.70016  

   Heumann, Robert E; Turner, Monica G; Cleveland, Cory C (February 2025, Ecology)

   Abstract Severe, stand‐replacing wildfire substantially depletes nitrogen (N) stocks in subalpine conifer forests, potentially exacerbating N limitation of net primary productivity in many forested regions where fire frequency is increasing. In lodgepole pine (Pinus contortavar.latifolia) forests in the Greater Yellowstone Ecosystem (GYE), long‐term data show surface soil and biomass N stocks are replenished during the first few decades following wildfire, but the source(s) of that N are unclear. We measured acetylene reduction rates in multiple cryptic niches (i.e., lichen, moss, pine litter, dead wood, and mineral soil) in 34‐year‐old lodgepole pine stands in the GYE to explore the rates, temporal patterns, and climate controls on cryptic N fixation. Acetylene reduction rates were highest in late May (0.376 nmol C₂H₄g⁻¹ h⁻¹) when moisture availability was high compared with early August and mid‐October when moisture was relatively low (0.112 and 0.002 nmol C₂H₄g⁻¹ h⁻¹, respectively). We observed modest rates of nitrogenase activity in a few niches following a mid‐summer rain event, suggesting that moisture is an important factor regulating field‐based N fixation rates. In a laboratory experiment, moss responded more strongly to temperature and moisture variation than all other niches. Acetylene reduction rates in dead wood increased with temperature but not moisture content. No other niches showed clear responses to either moisture or temperature manipulation. Together, the field and laboratory results suggest that frequent asynchrony between favorable temperature and moisture conditions may limit N fixation rates in the field. Overall, total annual cryptic N fixation inputs (mean: 0.26; range: 0.07–2.9 kg N ha⁻¹year⁻¹) represented <10% of the postfire biomass and surface soil N accumulation in the same stands (39.4 kg N ha⁻¹year⁻¹), pointing to a still unknown source of ecosystem N following fire. 

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5. Clonal versus non-clonal milkweeds ( Asclepias spp.) respond differently to stem damage, affecting oviposition by monarch butterflies

   https://doi.org/10.7717/peerj.10296  

   He, Elise; Agrawal, Anurag A. (January 2020, PeerJ)

   null (Ed.)

   Background Oviposition decisions are critical to the fitness of herbivorous insects and are often impacted by the availability and condition of host plants. Monarch butterflies ( Danaus plexippus ) rely on milkweeds ( Asclepias spp.) for egg-laying and as food for larvae. Previous work has shown that monarchs prefer to oviposit on recently regrown plant tissues (after removal of above-ground biomass) while larvae grow poorly on plants previously damaged by insects. We hypothesized that these effects may depend on the life-history strategy of plants, as clonal and non-clonal milkweed species differ in resource allocation and defense strategies. Methodology/Principal Findings We first confirmed butterfly preference for regrown tissue in a field survey of paired mowed and unmowed plots of the common milkweed A. syriaca . We then experimentally studied the effects of plant damage (comparing undamaged controls to plants clipped and regrown, or damaged by insects) on oviposition choice, larval performance, and leaf quality of two closely related clonal and non-clonal species pairs: (1) A. syriaca and A. tuberosa , and (2) A. verticillata and A. incarnata . Clonal and non-clonal species displayed different responses to plant damage, impacting the proportions of eggs laid on plants. Clonal species had similar mean proportions of eggs on regrown and control plants (≈35–40% each), but fewer on insect-damaged plants (≈20%). Meanwhile non-clonal species had similar oviposition on insect-damaged and control plants (20–30% each) but more eggs on regrown plants (40–60%). Trait analyses showed reduced defenses in regrown plants and we found some evidence, although variable, for negative effects of insect damage on subsequent larval performance. Conclusions/Significance Overall, non-clonal species are more susceptible and preferred by monarch butterflies following clipping, while clonal species show tolerance to clipping and induced defense to insect herbivory. These results have implications for monarch conservation strategies that involve milkweed habitat management by mowing. More generally, plant life-history may mediate growth and defense strategies, explaining species-level variation in responses to different types of damage. 

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