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1. The role of parasite dispersal in shaping a host–parasite system at multiple evolutionary scales

   https://doi.org/10.1111/mec.14937  

   Sweet, Andrew D. ; Johnson, Kevin P. ( December 2018 , Molecular Ecology)

   Parasite dispersal can shape host–parasite interactions at both deep and shallow timescales. One approach to understanding the effects of dispersal is to study parasite lineages that differ in dispersal capability but are from the same group of hosts. In this study, we compared phylogenetic and population genetic patterns of wing and body lice from ground‐doves. Wing lice are more capable of dispersal than body lice. We sequenced full genomes of individual lice for multiple representatives of several wing and body louse species. From these data, we assembled genes for phylogenetic analysis and called SNPs for population genetic analysis. At the phylogenetic level, body lice showed more codivergence with their hosts than did wing lice. However, both wing and body lice exhibited some phylogenetic congruence with their hosts. Within species, body lice showed more population genetic structure than wing lice, although both types of lice showed some structure according to biogeography. Body lice also had significantly lower heterozygosity than wing lice, suggesting more inbreeding. Our results demonstrate that dispersal can shape a host–parasite system across evolutionary time, but also that other factors (e.g., host association and biogeography) can have varying degrees of influence on different groups of parasites and at different evolutionary scales.

    

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2. Phylogenomic analysis of seal lice reveals codivergence with their hosts

   https://doi.org/10.1111/syen.12350  

   Leonardi, María Soledad ; Virrueta Herrera, Stephany ; Sweet, Andrew ; Negrete, Javier ; Johnson, Kevin P. ( March 2019 , Systematic Entomology)

   Lice are considered a model system for studying the process of cospeciation because they are obligate and permanent parasites and are often highly host‐specific. Among lice, species in the family Echinophthiriidae Enderlein (Anoplura) are unique in that they infest mammalian hosts with an amphibious lifestyle, i.e. pinnipeds and the river otter. There is evidence that the ancestor of this group infested the terrestrial ancestor of pinnipeds, which suggests these parasites coevolved with their hosts during the transition to marine environments. However, there has been no previous study investigating the phylogenetic relationships among sucking lice parasitizing seals and sea lions. To uncover the evolutionary history of these parasites, we obtained genomic data forAntarctophthirus microchirTrouessart and Neumann (from two hosts),Antarctophthirus carliniiLeonardiet al.,Antarctophthirus lobodontisEnderlein,Antarctophthirus ogmorhiniEnderlein,Lepidophthirus macrorhiniEnderlein, andProechinophthirus fluctusFerris. From genomic sequence reads, we assembled > 1000 nuclear genes and used these data to infer a phylogenetic tree for these lice. We also used the assembled genes in combination with read‐mapping to estimate heterozygosity and effective population size from individual lice. Our analysis supports the monophyly of lice from pinnipeds and uncovers phylogenetic relationships within the group. Surprisingly, we found thatA. carlinii,A. lobodontis, andA. ogmorhinihave very little genetic divergence among them, whereas the divergence between different geographic representatives ofA. microchirindicate that they are possibly different species. Nevertheless, our phylogeny of Echinophthiriidae suggests that these lice have consistently codiverged with their hosts with minimal host switching. Population genomic metrics indicate that louse effective population size is linked to host demographics, which further highlights the close association between pinnipeds and their lice.

    

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3. The cost of travel: How dispersal ability limits local adaptation in host–parasite interactions

   https://doi.org/10.1111/jeb.13754  

   Johnson, Pieter ; Calhoun, Dana M. ; Moss, Wynne E. ; McDevitt‐Galles, Travis ; Riepe, Tawni B. ; Hallas, Joshua M. ; Parchman, Thomas L. ; Feldman, Chris R. ; Achatz, Tyler J. ; Tkach, Vasyl V. ; et al ( December 2020 , Journal of Evolutionary Biology)

   Classical theory suggests that parasites will exhibit higher fitness in sympatric relative to allopatric host populations (local adaptation). However, evidence for local adaptation in natural host–parasite systems is often equivocal, emphasizing the need for infection experiments conducted over realistic geographic scales and comparisons among species with varied life history traits. Here, we used infection experiments to test how two trematode (flatworm) species (Paralechriorchis syntomenteraandRibeiroia ondatrae) with differing dispersal abilities varied in the strength of local adaptation to their amphibian hosts. Both parasites have complex life cycles involving sequential transmission among aquatic snails, larval amphibians and vertebrate definitive hosts that control dispersal across the landscape. By experimentally pairing 26 host‐by‐parasite population infection combinations from across the western USA with analyses of host and parasite spatial genetic structure, we found that increasing geographic distance—and corresponding increases in host population genetic distance—reduced infection success forP. syntomentera, which is dispersed by snake definitive hosts. For the avian‐dispersedR. ondatrae, in contrast, the geographic distance between the parasite and host populations had no influence on infection success. Differences in local adaptation corresponded to parasite genetic structure; although populations ofP. syntomenteraexhibited ~10% mtDNA sequence divergence, those ofR. ondatraewere nearly identical (<0.5%), even across a 900 km range. Taken together, these results offer empirical evidence that high levels of dispersal can limit opportunities for parasites to adapt to local host populations.

    

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4. Diet energy density estimated from isotopes in predator hair associated with survival, habitat, and population dynamics

   https://doi.org/10.1002/eap.2751  

   Rode, Karyn D. ; Taras, Brian D. ; Stricker, Craig A. ; Atwood, Todd C. ; Boucher, Nicole P. ; Durner, George M. ; Derocher, Andrew E. ; Richardson, Evan S. ; Cherry, Seth G. ; Quakenbush, Lori ; et al ( December 2022 , Ecological Applications)

   Sea ice loss is fundamentally altering the Arctic marine environment. Yet there is a paucity of data on the adaptability of food webs to ecosystem change, including predator–prey interactions. Polar bears (Ursus maritimus) are an important subsistence resource for Indigenous people and an apex predator that relies entirely on the under‐ice food web to meet its energy needs. In this study, we assessed whether polar bears maintained dietary energy density by prey switching in response to spatiotemporal variation in prey availability. We compared the macronutrient composition of diets inferred from stable carbon and nitrogen isotopes in polar bear guard hair (primarily representing summer/fall diet) during periods when bears had low and high survival (2004–2016), between bears that summered on land versus pack ice, and between bears occupying different regions of the Alaskan and Canadian Beaufort Sea. Polar bears consumed diets with lower energy density during periods of low survival, suggesting that concurrent increased dietary proportions of beluga whales (Delphinapterus leucas) did not offset reduced proportions of ringed seals (Pusa hispida). Diets with the lowest energy density and proportions from ringed seal blubber were consumed by bears in the western Beaufort Sea (Alaska) during a period when polar bear abundance declined. Intake required to meet energy requirements of an average free‐ranging adult female polar bear was 2.1 kg/day on diets consumed during years with high survival but rose to 3.0 kg/day when survival was low. Although bears that summered onshore in the Alaskan Beaufort Sea had higher‐fat diets than bears that summered on the pack ice, access to the remains of subsistence‐harvested bowhead whales (Balaena mysticetus) contributed little to improving diet energy density. Because most bears in this region remain with the sea ice year round, prey switching and consumption of whale carcasses onshore appear insufficient to augment diets when availability of their primary prey, ringed seals, is reduced. Our results show that a strong predator–prey relationship between polar bears and ringed seals continues in the Beaufort Sea. The method of estimating dietary blubber using predator hair, demonstrated here, provides a new metric to monitor predator–prey relationships that affect individual health and population demographics.

    

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5. Global drivers of avian haemosporidian infections vary across zoogeographical regions

   https://doi.org/10.1111/geb.13390  

   Fecchio, Alan ; Clark, Nicholas J. ; Bell, Jeffrey A. ; Skeen, Heather R. ; Lutz, Holly L. ; De La Torre, Gabriel M. ; Vaughan, Jefferson A. ; Tkach, Vasyl V. ; Schunck, Fabio ; Ferreira, Francisco C. ; et al ( September 2021 , Global Ecology and Biogeography)

   Macroecological analyses provide valuable insights into factors that influence how parasites are distributed across space and among hosts. Amid large uncertainties that arise when generalizing from local and regional findings, hierarchical approaches applied to global datasets are required to determine whether drivers of parasite infection patterns vary across scales. We assessed global patterns of haemosporidian infections across a broad diversity of avian host clades and zoogeographical realms to depict hotspots of prevalence and to identify possible underlying drivers.

   Global.

   1994–2019.

   Avian haemosporidian parasites (generaPlasmodium,Haemoproteus,LeucocytozoonandParahaemoproteus).

   We amalgamated infection data from 53,669 individual birds representing 2,445 species world‐wide. Spatio‐phylogenetic hierarchical Bayesian models were built to disentangle potential landscape, climatic and biotic drivers of infection probability while accounting for spatial context and avian host phylogenetic relationships.

   Idiosyncratic responses of the three most common haemosporidian genera to climate, habitat, host relatedness and host ecological traits indicated marked variation in host infection rates from local to global scales. Notably, host ecological drivers, such as migration distance forPlasmodiumandParahaemoproteus, exhibited predominantly varying or even opposite effects on infection rates across regions, whereas climatic effects on infection rates were more consistent across realms. Moreover, infections in some low‐prevalence realms were disproportionately concentrated in a few local hotspots, suggesting that regional‐scale variation in habitat and microclimate might influence transmission, in addition to global drivers.

   Our hierarchical global analysis supports regional‐scale findings showing the synergistic effects of landscape, climate and host ecological traits on parasite transmission for a cosmopolitan and diverse group of avian parasites. Our results underscore the need to account for such interactions, in addition to possible variation in drivers across regions, to produce the robust inference required to predict changes in infection risk under future scenarios.

    

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