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1. Green function estimates on complements of low-dimensional uniformly rectifiable sets

   https://doi.org/10.1007/s00208-022-02379-8  

   David, Guy ; Feneuil, Joseph ; Mayboroda, Svitlana ( March 2022 , Mathematische Annalen)

   It has been recently established in David and Mayboroda (Approximation of green functions and domains with uniformly rectifiable boundaries of all dimensions.arXiv:2010.09793) that on uniformly rectifiable sets the Green function is almost affine in the weak sense, and moreover, in some scenarios such Green function estimates are equivalent to the uniform rectifiability of a set. The present paper tackles a strong analogue of these results, starting with the “flagship degenerate operators on sets with lower dimensional boundaries. We consider the elliptic operators$$L_{\beta ,\gamma } =- {\text {div}}D^{d+1+\gamma -n} \nabla $$$L_{\beta ,\gamma }=-\text{div}{D}^{d+1+\gamma -n}\nabla$associated to a domain$$\Omega \subset {\mathbb {R}}^n$$$\Omega \subset R^n$with a uniformly rectifiable boundary$$\Gamma $$$\Gamma$of dimension$$d < n-1$$$d<n-1$, the now usual distance to the boundary$$D = D_\beta $$$D=D_{\beta }$given by$$D_\beta (X)^{-\beta } = \int _{\Gamma } |X-y|^{-d-\beta } d\sigma (y)$$$D_{\beta }{\left(X\right)}^{-\beta }={\int }_{\Gamma }{|X-y|}^{-d-\beta }d\sigma \left(y\right)$for$$X \in \Omega $$$X\in \Omega$, where$$\beta >0$$$\beta >0$and$$\gamma \in (-1,1)$$$\gamma \in (-1,1)$. In this paper we show that the Green functionGfor$$L_{\beta ,\gamma }$$$L_{\beta ,\gamma }$, with pole at infinity, is well approximated by multiples of$$D^{1-\gamma }$$$D^{1-\gamma }$, in the sense that the function$$\big | D\nabla \big (\ln \big ( \frac{G}{D^{1-\gamma }} \big )\big )\big |^2$$$|D\nabla (ln(\frac{G}{D^{1-\gamma }})){|}^2$satisfies a Carleson measure estimate on$$\Omega $$$\Omega$. We underline that the strong and the weak results are different in nature and, of course, at the level of the proofs: the latter extensively used compactness arguments, while the present paper relies on some intricate integration by parts and the properties of the “magical distance function from David et al. (Duke Math J, to appear).

    

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2. A database of calculated solution parameters for the AlphaFold predicted protein structures

   https://doi.org/10.1038/s41598-022-10607-z  

   Brookes, Emre ; Rocco, Mattia ( May 2022 , Scientific Reports)

   Recent spectacular advances by AI programs in 3D structure predictions from protein sequences have revolutionized the field in terms of accuracy and speed. The resulting “folding frenzy” has already produced predicted protein structure databases for the entire human and other organisms’ proteomes. However, rapidly ascertaining a predicted structure’s reliability based on measured properties in solution should be considered. Shape-sensitive hydrodynamic parameters such as the diffusion and sedimentation coefficients ($${D_{t(20,w)}^{0}}$$$D_{t(20,w)}^0$,$${s_{{\left( {{20},w} \right)}}^{{0}} }$$$s_{\left(20,w\right)}^0$) and the intrinsic viscosity ([η]) can provide a rapid assessment of the overall structure likeliness, and SAXS would yield the structure-related pair-wise distance distribution functionp(r) vs.r. Using the extensively validated UltraScan SOlution MOdeler (US-SOMO) suite, a database was implemented calculating from AlphaFold structures the corresponding$${D_{t(20,w)}^{0}}$$$D_{t(20,w)}^0$,$${s_{{\left( {{20},w} \right)}}^{{0}} }$$$s_{\left(20,w\right)}^0$, [η],p(r) vs.r, and other parameters. Circular dichroism spectra were computed using the SESCA program. Some of AlphaFold’s drawbacks were mitigated, such as generating whenever possible a protein’s mature form. Others, like the AlphaFold direct applicability to single-chain structures only, the absence of prosthetic groups, or flexibility issues, are discussed. Overall, this implementation of the US-SOMO-AF database should already aid in rapidly evaluating the consistency in solution of a relevant portion of AlphaFold predicted protein structures.

    

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3. Approximate Unitary t-Designs by Short Random Quantum Circuits Using Nearest-Neighbor and Long-Range Gates

   https://doi.org/10.1007/s00220-023-04675-z  

   Harrow, Aram W. ; Mehraban, Saeed ( May 2023 , Communications in Mathematical Physics)

   We prove that$${{\,\textrm{poly}\,}}(t) \cdot n^{1/D}$$$\text{poly}\left(t\right)·n^{1/D}$-depth local random quantum circuits with two qudit nearest-neighbor gates on aD-dimensional lattice withnqudits are approximatet-designs in various measures. These include the “monomial” measure, meaning that the monomials of a random circuit from this family have expectation close to the value that would result from the Haar measure. Previously, the best bound was$${{\,\textrm{poly}\,}}(t)\cdot n$$$\text{poly}\left(t\right)·n$due to Brandão–Harrow–Horodecki (Commun Math Phys 346(2):397–434, 2016) for$$D=1$$$D=1$. We also improve the “scrambling” and “decoupling” bounds for spatially local random circuits due to Brown and Fawzi (Scrambling speed of random quantum circuits, 2012). One consequence of our result is that assuming the polynomial hierarchy ($${{\,\mathrm{\textsf{PH}}\,}}$$$\mathrm{PH}$) is infinite and that certain counting problems are$$\#{\textsf{P}}$$$\#P$-hard “on average”, sampling within total variation distance from these circuits is hard for classical computers. Previously, exact sampling from the outputs of even constant-depth quantum circuits was known to be hard for classical computers under these assumptions. However the standard strategy for extending this hardness result to approximate sampling requires the quantum circuits to have a property called “anti-concentration”, meaning roughly that the output has near-maximal entropy. Unitary 2-designs have the desired anti-concentration property. Our result improves the required depth for this level of anti-concentration from linear depth to a sub-linear value, depending on the geometry of the interactions. This is relevant to a recent experiment by the Google Quantum AI group to perform such a sampling task with 53 qubits on a two-dimensional lattice (Arute in Nature 574(7779):505–510, 2019; Boixo et al. in Nate Phys 14(6):595–600, 2018) (and related experiments by USTC), and confirms their conjecture that$$O(\sqrt{n})$$$O\left(\sqrt{n}\right)$depth suffices for anti-concentration. The proof is based on a previous construction oft-designs by Brandão et al. (2016), an analysis of how approximate designs behave under composition, and an extension of the quasi-orthogonality of permutation operators developed by Brandão et al. (2016). Different versions of the approximate design condition correspond to different norms, and part of our contribution is to introduce the norm corresponding to anti-concentration and to establish equivalence between these various norms for low-depth circuits. For random circuits with long-range gates, we use different methods to show that anti-concentration happens at circuit size$$O(n\ln ^2 n)$$$O\left(n{ln}^{2}n\right)$corresponding to depth$$O(\ln ^3 n)$$$O\left({ln}^{3}n\right)$. We also show a lower bound of$$\Omega (n \ln n)$$$\Omega (nlnn)$for the size of such circuit in this case. We also prove that anti-concentration is possible in depth$$O(\ln n \ln \ln n)$$$O(lnnlnlnn)$(size$$O(n \ln n \ln \ln n)$$$O(nlnnlnlnn)$) using a different model.

    

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4. Numerical approximation of nonlinear SPDE’s

   https://doi.org/10.1007/s40072-022-00271-9  

   Ondreját, Martin ; Prohl, Andreas ; Walkington, Noel J. ( September 2022 , Stochastics and Partial Differential Equations: Analysis and Computations)

   The numerical analysis of stochastic parabolic partial differential equations of the form$$\begin{aligned} du + A(u)\, dt = f \,dt + g \, dW, \end{aligned}$$$\begin{array}{c}du+A\left(u\right)dt=fdt+gdW,\end{array}$is surveyed, whereAis a nonlinear partial operator andWa Brownian motion. This manuscript unifies much of the theory developed over the last decade into a cohesive framework which integrates techniques for the approximation of deterministic partial differential equations with methods for the approximation of stochastic ordinary differential equations. The manuscript is intended to be accessible to audiences versed in either of these disciplines, and examples are presented to illustrate the applicability of the theory.

    

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5. Random Quantum Circuits Transform Local Noise into Global White Noise

   https://doi.org/10.1007/s00220-024-04958-z  

   Dalzell, Alexander M. ; Hunter-Jones, Nicholas ; Brandão, Fernando G. S. L. ( March 2024 , Communications in Mathematical Physics)

   We study the distribution over measurement outcomes of noisy random quantum circuits in the regime of low fidelity, which corresponds to the setting where the computation experiences at least one gate-level error with probability close to one. We model noise by adding a pair of weak, unital, single-qubit noise channels after each two-qubit gate, and we show that for typical random circuit instances, correlations between the noisy output distribution$$p_{\text {noisy}}$$$p_{\text{noisy}}$and the corresponding noiseless output distribution$$p_{\text {ideal}}$$$p_{\text{ideal}}$shrink exponentially with the expected number of gate-level errors. Specifically, the linear cross-entropy benchmarkFthat measures this correlation behaves as$$F=\text {exp}(-2s\epsilon \pm O(s\epsilon ^2))$$$F=\text{exp}(-2sϵ\pm O\left(s{ϵ}^2\right))$, where$$\epsilon $$$ϵ$is the probability of error per circuit location andsis the number of two-qubit gates. Furthermore, if the noise is incoherent—for example, depolarizing or dephasing noise—the total variation distance between the noisy output distribution$$p_{\text {noisy}}$$$p_{\text{noisy}}$and the uniform distribution$$p_{\text {unif}}$$$p_{\text{unif}}$decays at precisely the same rate. Consequently, the noisy output distribution can be approximated as$$p_{\text {noisy}}\approx Fp_{\text {ideal}}+ (1-F)p_{\text {unif}}$$$p_{\text{noisy}}\approx F{p}_{\text{ideal}}+(1-F)p_{\text{unif}}$. In other words, although at least one local error occurs with probability$$1-F$$$1-F$, the errors are scrambled by the random quantum circuit and can be treated as global white noise, contributing completely uniform output. Importantly, we upper bound the average total variation error in this approximation by$$O(F\epsilon \sqrt{s})$$$O\left(Fϵ\sqrt{s}\right)$. Thus, the “white-noise approximation” is meaningful when$$\epsilon \sqrt{s} \ll 1$$$ϵ\sqrt{s}\ll 1$, a quadratically weaker condition than the$$\epsilon s\ll 1$$$ϵs\ll 1$requirement to maintain high fidelity. The bound applies if the circuit size satisfies$$s \ge \Omega (n\log (n))$$$s\ge \Omega (nlog(n\left)\right)$, which corresponds to onlylogarithmic depthcircuits, and if, additionally, the inverse error rate satisfies$$\epsilon ^{-1} \ge {\tilde{\Omega }}(n)$$${ϵ}^{-1}\ge \tilde{\Omega }\left(n\right)$, which is needed to ensure errors are scrambled faster thanFdecays. The white-noise approximation is useful for salvaging the signal from a noisy quantum computation; for example, it was an underlying assumption in complexity-theoretic arguments that noisy random quantum circuits cannot be efficiently sampled classically, even when the fidelity is low. Our method is based on a map from second-moment quantities in random quantum circuits to expectation values of certain stochastic processes for which we compute upper and lower bounds.

    

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