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Abstract The type II polyproline helix (PPII) is a fundamental secondary structure of proteins, important in globular proteins, in intrinsically disordered proteins, and at protein‐protein interfaces. PPII is stabilized in part byn→π* interactions between consecutive carbonyls, via electron delocalization between an electron‐donor carbonyl lone pair (n) and an electron‐acceptor carbonyl (π*) on the subsequent residue. We previously demonstrated that changes to the electronic properties of the acyl donor can predictably modulate the strength ofn→π* interactions, with data from model compounds, in solution in chloroform, in the solid state, and computationally. Herein, we examined whether the electronic properties of acyl capping groups could modulate the stability of PPII in peptides in water. InX−PPGY‐NH2peptides (X=10 acyl capping groups), the effect of acyl group identity on PPII was quantified by circular dichroism and NMR spectroscopy. Electron‐rich acyl groups promoted PPII relative to the standard acetyl (Ac−) group, with the pivaloyl andiso‐butyryl groups most significantly increasing PPII. In contrast, acyl derivatives with electron‐withdrawing substituents and the formyl group relatively disfavored PPII. Similar results, though lesser in magnitude, were also observed inX−APPGY‐NH2peptides, indicating that the capping group can impact PPII conformation at both proline and non‐proline residues. The pivaloyl group was particularly favorable in promoting PPII. The effects of acyl capping groups were further analyzed inX–DfpPGY‐NH2andX−ADfpPGY‐NH2peptides, Dfp=4,4‐difluoroproline. Data on these peptides indicated that acyl groups induced order Piv‐ > Ac‐ > For‐. These results suggest that greater consideration should be given to the identity of acyl capping groups in inducing structure in peptides.
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A multi‐descriptor analysis of substituent effects on the structure and aromaticity of benzene derivatives: π‐Conjugation versus charge effects
Abstract This work provides a detailed multi‐component analysis of aromaticity in monosubstituted (X = CH3, C, C, NH2, NH−, NH+, OH, O−, and O+) andpara‐homodisubstituted (X = CH3, CH2, NH2, NH, OH, and O) benzene derivatives. We investigate the effects of substituents using single‐reference (B3LYP/DFT) and multireference (CASSCF/MRCI) methods, focusing on structural (HOMA), vibrational (AI(vib)), topological (ELFπ), electronic (MCI), magnetic (NICS), and stability (S0–T1splitting) properties. The findings reveal that appropriateπ‐electron‐donating andπ‐electron‐accepting substituents with suitable size and symmetry can interact with theπ‐system of the ring, significantly influencingπ‐electron delocalization. While the charge factor has a minimal impact onπ‐electron delocalization, the presence of apzorbital capable of interacting with theπ‐electron delocalization is the primary factor leading to a deviation from the typical aromaticity characteristics observed in benzene.
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- Award ID(s):
- 2107923
- PAR ID:
- 10483821
- Publisher / Repository:
- Wiley Blackwell (John Wiley & Sons)
- Date Published:
- Journal Name:
- Journal of Computational Chemistry
- ISSN:
- 0192-8651
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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