skip to main content


Title: Hydrolysis of ionic liquid–treated substrate with an Iocasia fonsfrigidae strain SP3-1 endoglucanase
Abstract

Recently, we reported the discovery of a novel endoglucanase of the glycoside hydrolase family 12 (GH12), designated IfCelS12A, from the haloalkaliphilic anaerobic bacteriumIocasia fonsfrigidaestrain SP3-1, which was isolated from a hypersaline pond in the Samut Sakhon province of Thailand (ca. 2017). IfCelS12A exhibits high substrate specificity on carboxymethyl cellulose and amorphous cellulose but low substrate specificity on b-1,3;1,4-glucan. Unlike some endoglucanases of the GH12 family, IfCelS12A does not exhibit hydrolytic activity on crystalline cellulose (i.e., Avicel™). High-Pressure Liquid Chromatography (HPLC) and Thin Layer Chromatography (TLC) analyses of products resulting from IfCelS12-mediated hydrolysis indicate mode of action for this enzyme. Notably, IfCelS12A preferentially hydrolyzes cellotetraoses, cellopentaoses, and cellohexaoses with negligible activity on cellobiose or cellotriose. Kinetic analysis with cellopentaose and barely b-d-glucan as cellulosic substrates were conducted. On cellopentaose, IfCelS12A demonstrates a 16-fold increase in activity (KM = 0.27 mM;kcat = 0.36 s−1;kcat/KM = 1.34 mM−1s−1) compared to the enzymatic hydrolysis of barley b-d-glucan (KM: 0.04 mM,kcat: 0.51 s−1,kcat/KM = 0.08 mM−1s−1). Moreover, IfCelS12A enzymatic efficacy is stable in hypersaline sodium chlorids (NaCl) solutions (up to 10% NaCl). Specifically, IfCel12A retains notable activity after 24 h at 2M NaCl (10% saline solution). IfCelS12A used as a cocktail component with other cellulolytic enzymes and in conjunction with mobile sequestration platform technology offers additional options for deconstruction of ionic liquid–pretreated cellulosic feedstock.

Key points

IfCelS12A from an anaerobic alkaliphile Iocasia fronsfrigidae shows salt tolerance

IfCelS12A in cocktails with other enzymes efficiently degrades cellulosic biomass

IfCelS12A used with mobile enzyme sequestration platforms enhances hydrolysis

 
more » « less
Award ID(s):
1818346
NSF-PAR ID:
10484906
Author(s) / Creator(s):
; ; ; ; ; ; ;
Publisher / Repository:
Springer Science + Business Media
Date Published:
Journal Name:
Applied Microbiology and Biotechnology
Volume:
108
Issue:
1
ISSN:
0175-7598
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Characteristics of the life history of the coral reef‐dwelling cardinalfishSiphamia tubifer, from Okinawa, Japan, were defined. A paternal mouthbrooder,S. tubifer, is unusual in forming a bioluminescent symbiosis withPhotobacterium mandapamensis. The examinedS. tubifer(n = 1273) ranged in size from 9·5 to 43·5 mm standard length (LS), and the minimum size at sexual maturity was 22 mmLS. The number ofS. tubiferassociated during the day among the spines of host urchins was 22·9 ± 16·1 (mean ± s.d.;Diadema setosum) and 3·6 ± 3·2 (Echinothrix calamaris). Diet consisted primarily of crustacean zooplankton. Batch fecundity (number of eggs;FB) was related toLSby the equations: males (fertilized eggs)FB = 27·5LS − 189·46; females (eggs)FB = 31·3LS − 392·63. Individual mass (M; g) as a function ofLSwas described by the equation:. Growth, determined from otolith microstructure analysis, was described with the von Bertalanffy growth function with the following coefficients:L = 40·8 mmLS,K = 0·026 day−1andt0 = 23·25 days. Planktonic larval duration was estimated to be 30 days. The age of the oldest examined individual was 240 days. The light organ ofS. tubifer, which harbours the symbiotic population ofP. mandapamensis, increased linearly in diameter asS. tubifer LSincreased, and the bacterial population increased logarithmically withS. tubifer LS. These characteristics indicate that once settled,S. tubifergrows quickly, reproduces early and typically survives much less than 1 year in Okinawa. These characteristics are generally similar to other small reef fishes but they indicate thatS. tubiferexperiences higher mortality.

     
    more » « less
  2. Abstract Background

    Future expansion of corn-derived ethanol raises concerns of sustainability and competition with the food industry. Therefore, cellulosic biofuels derived from agricultural waste and dedicated energy crops are necessary. To date, slow and incomplete saccharification as well as high enzyme costs have hindered the economic viability of cellulosic biofuels, and while approaches like simultaneous saccharification and fermentation (SSF) and the use of thermotolerant microorganisms can enhance production, further improvements are needed. Cellulosic emulsions have been shown to enhance saccharification by increasing enzyme contact with cellulose fibers. In this study, we use these emulsions to develop an emulsified SSF (eSSF) process for rapid and efficient cellulosic biofuel production and make a direct three-way comparison of ethanol production betweenS. cerevisiae,O. polymorpha, andK. marxianusin glucose and cellulosic media at different temperatures.

    Results

    In this work, we show that cellulosic emulsions hydrolyze rapidly at temperatures tolerable to yeast, reaching up to 40-fold higher conversion in the first hour compared to microcrystalline cellulose (MCC). To evaluate suitable conditions for the eSSF process, we explored the upper temperature limits for the thermotolerant yeastsKluyveromyces marxianusandOgataea polymorpha, as well asSaccharomyces cerevisiae, and observed robust fermentation at up to 46, 50, and 42 °C for each yeast, respectively. We show that the eSSF process reaches high ethanol titers in short processing times, and produces close to theoretical yields at temperatures as low as 30 °C. Finally, we demonstrate the transferability of the eSSF technology to other products by producing the advanced biofuel isobutanol in a light-controlled eSSF using optogenetic regulators, resulting in up to fourfold higher titers relative to MCC SSF.

    Conclusions

    The eSSF process addresses the main challenges of cellulosic biofuel production by increasing saccharification rate at temperatures tolerable to yeast. The rapid hydrolysis of these emulsions at low temperatures permits fermentation using non-thermotolerant yeasts, short processing times, low enzyme loads, and makes it possible to extend the process to chemicals other than ethanol, such as isobutanol. This transferability establishes the eSSF process as a platform for the sustainable production of biofuels and chemicals as a whole.

     
    more » « less
  3. Key points

    Association of plasma membrane BKCachannels with BK‐β subunits shapes their biophysical properties and physiological roles; however, functional modulation of the mitochondrial BKCachannel (mitoBKCa) by BK‐β subunits is not established.

    MitoBKCa‐α and the regulatory BK‐β1 subunit associate in mouse cardiac mitochondria.

    A large fraction of mitoBKCadisplay properties similar to that of plasma membrane BKCawhen associated with BK‐β1 (left‐shifted voltage dependence of activation,V1/2 = −55 mV, 12 µmmatrix Ca2+).

    In BK‐β1 knockout mice, cardiac mitoBKCadisplayed a lowPoand a depolarizedV1/2of activation (+47 mV at 12 µmmatrix Ca2+)

    Co‐expression of BKCawith the BK‐β1 subunit in HeLa cells doubled the density of BKCain mitochondria.

    The present study supports the view that the cardiac mitoBKCachannel is functionally modulated by the BK‐β1 subunit; proper targeting and activation of mitoBKCashapes mitochondrial Ca2+handling.

    Abstract

    Association of the plasma membrane BKCachannel with auxiliary BK‐β1–4 subunits profoundly affects the regulatory mechanisms and physiological processes in which this channel participates. However, functional association of mitochondrial BK (mitoBKCa) with regulatory subunits is unknown. We report that mitoBKCafunctionally associates with its regulatory subunit BK‐β1 in adult rodent cardiomyocytes. Cardiac mitoBKCais a calcium‐ and voltage‐activated channel that is sensitive to paxilline with a large conductance for K+of 300 pS. Additionally, mitoBKCadisplays a high open probability (Po) and voltage half‐activation (V1/2 = −55 mV,n = 7) resembling that of plasma membrane BKCawhen associated with its regulatory BK‐β1 subunit. Immunochemistry assays demonstrated an interaction between mitochondrial BKCa‐α and its BK‐β1 subunit. Mitochondria from the BK‐β1 knockout (KO) mice showed sparse mitoBKCacurrents (five patches with mitoBKCaactivity out of 28 total patches fromn = 5 different hearts), displaying a depolarizedV1/2of activation (+47 mV in 12 µmmatrix Ca2+). The reduced activity of mitoBKCawas accompanied by a high expression of BKCatranscript in the BK‐β1 KO, suggesting a lower abundance of mitoBKCachannels in this genotype. Accordingly, BK‐β1subunit increased the localization of BKDEC (i.e. the splice variant of BKCathat specifically targets mitochondria) into mitochondria by two‐fold. Importantly, both paxilline‐treated and BK‐β1 KO mitochondria displayed a more rapid Ca2+overload, featuring an early opening of the mitochondrial transition pore. We provide strong evidence that mitoBKCaassociates with its regulatory BK‐β1 subunit in cardiac mitochondria, ensuring proper targeting and activation of the mitoBKCachannel that helps to maintain mitochondrial Ca2+homeostasis.

     
    more » « less
  4. Abstract

    We use medium-resolution Keck/Echellette Spectrograph and Imager spectroscopy of bright quasars to study cool gas traced by Caiiλλ3934, 3969 and Naiλλ5891, 5897 absorption in the interstellar/circumgalactic media of 21 foreground star-forming galaxies at redshifts 0.03 <z< 0.20 with stellar masses 7.4 ≤ logM*/M≤ 10.6. The quasar–galaxy pairs were drawn from a unique sample of Sloan Digital Sky Survey quasar spectra with intervening nebular emission, and thus have exceptionally close impact parameters (R< 13 kpc). The strength of this line emission implies that the galaxies’ star formation rates (SFRs) span a broad range, with several lying well above the star-forming sequence. We use Voigt profile modeling to derive column densities and component velocities for each absorber, finding that column densitiesN(Caii) > 1012.5cm−2(N(Nai) > 1012.0cm−2) occur with an incidencefC(Caii) = 0.63+0.10−0.11(fC(Nai) = 0.57+0.10−0.11). We find no evidence for a dependence offCor the rest-frame equivalent widthsWr(CaiiK) orWr(Nai5891) onRorM*. Instead,Wr(CaiiK) is correlated with local SFR at >3σsignificance, suggesting that Caiitraces star formation-driven outflows. While most of the absorbers have velocities within ±50 km s−1of the host redshift, their velocity widths (characterized by Δv90) are universally 30–177 km s−1larger than that implied by tilted-ring modeling of the velocities of interstellar material. These kinematics must trace galactic fountain flows and demonstrate that they persist atR> 5 kpc. Finally, we assess the relationship between dust reddening andWr(CaiiK) (Wr(Nai5891)), finding that 33% (24%) of the absorbers are inconsistent with the best-fit Milky WayE(B−V)-Wrrelations at >3σsignificance.

     
    more » « less
  5. ABSTRACT BACKGROUND AND PURPOSE

    Transvascular water exchange plays a key role in the functional integrity of the blood–brain barrier (BBB). In white matter (WM), a variety of imaging modalities have demonstrated age‐related changes in structure and metabolism, but the extent to which water exchange is altered remains unclear. Here, we investigated the cumulative effects of healthy aging on WM capillary water exchange.

    METHODS

    A total of 38 healthy adults (aged 36‐80 years) were studied using 7T dynamic contrast enhanced MRI. Blood volume fraction (vb) and capillary water efflux rate constant (kpo) were determined by fitting changes in the1H2O longitudinal relaxation rate constant (R1) during contrast agent bolus passage to a two‐compartment exchange model. WM volume was determined by morphometric analysis of structural images.

    RESULTS

    R1values and WM volume showed similar trajectories of age‐related decline. Among all subjects,vbandkpoaveraged 1.7 (±0.5) mL/100 g of tissue and 2.1 (±1.1) s−1, respectively. Whilevbshowed minimal changes over the 40‐year‐age span of participants,kpodeclined 0.06 s−1(ca. 3%) per year (r= −.66;< .0005), from near 4 s−1at age 30 to ca. 2 s−1at age 70. The association remained significant after controlling for WM volume.

    CONCLUSIONS

    Previous studies have shown thatkpotracks Na+, K+‐ATPase activity‐dependent water exchange at the BBB and likely reflects neurogliovascular unit (NGVU) coupled metabolic activity. The age‐related decline inkpoobserved here is consistent with compromised NGVU metabolism in older individuals and the dysregulated cellular bioenergetics that accompany normal brain aging.

     
    more » « less