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1. Photorespiration: The Futile Cycle?

   https://doi.org/10.3390/plants10050908  

   Shi, Xiaoxiao; Bloom, Arnold (May 2021, Plants)

   null (Ed.)

   Photorespiration, or C2 photosynthesis, is generally considered a futile cycle that potentially decreases photosynthetic carbon fixation by more than 25%. Nonetheless, many essential processes, such as nitrogen assimilation, C1 metabolism, and sulfur assimilation, depend on photorespiration. Most studies of photosynthetic and photorespiratory reactions are conducted with magnesium as the sole metal cofactor despite many of the enzymes involved in these reactions readily associating with manganese. Indeed, when manganese is present, the energy efficiency of these reactions may improve. This review summarizes some commonly used methods to quantify photorespiration, outlines the influence of metal cofactors on photorespiratory enzymes, and discusses why photorespiration may not be as wasteful as previously believed. 

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2. Metabolic flux analysis in leaf metabolism quantifies the link between photorespiration and one carbon metabolism

   https://doi.org/10.1038/s41477-025-02091-w  

   Gashu, Kelem; Kaste, Joshua_A M; Roje, Sanja; Walker, Berkley J (September 2025, Nature Plants)

   Photorespiration is the second largest carbon flux in most leaves and is integrated into metabolism broadly including one-carbon (C1) metabolism. Photorespiratory intermediates such as serine and others may serve as sources of C1 units, but it is unclear to what degree this happens in vivo, whether altered photorespiration changes flux to C1 metabolism, and if so through which intermediates. To clarify these questions, we quantified carbon flux from photorespiration to C1 metabolism using 13CO2 labelling and isotopically non-stationary metabolic flux analysis in Arabidopsis thaliana under different O2 concentrations which modulate photorespiration. The results revealed that ~5.8% of assimilated carbon passes to C1 metabolism under ambient photorespiratory conditions, but this flux greatly decreases under limited photorespiration. Furthermore, the primary carbon flux from photorespiration to C1 metabolism is through serine. Our results provide fundamental insight into how photorespiration is integrated into C1 metabolism, with possible implications for C1 metabolic response to climate change. 

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3. Manganese binding to Rubisco could drive a photorespiratory pathway that increases the energy efficiency of photosynthesis

   https://doi.org/10.1038/s41477-018-0191-0  

   Bloom, Arnold J.; Lancaster, Kyle M. (July 2018, Nature Plants)

   Most plants, contrary to popular belief, do not waste over 30% of their photosynthate in a futile cycle called photorespiration. Rather, the photorespiratory pathway generates additional malate in the chloroplast that empowers many energy-intensive chemical reactions, such as those involved in nitrate assimilation. Thus, the balance between carbon fixation and photorespiration determines the plant carbon–nitrogen balance and protein concentrations. Plant protein concentrations, in turn, depend not only on the relative concentrations of carbon dioxide and oxygen in the chloroplast but also on the relative activities of magnesium and manganese, which are metals that associate with several key enzymes in the photorespiratory pathway and alter their function. Understanding the regulation of these processes is critical for sustaining food quality under rising CO2 atmospheres. 

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4. Catalase protects against nonenzymatic decarboxylations during photorespiration in Arabidopsis thaliana

   https://doi.org/10.1002/pld3.366  

   Bao, Han; Morency, Matt; Rianti, Winda; Saeheng, Sompop; Roje, Sanja; Weber, Andreas P. M.; Walker, Berkley James (December 2021, Plant Direct)

   Abstract Photorespiration recovers carbon that would be otherwise lost following the oxygenation reaction of rubisco and production of glycolate. Photorespiration is essential in plants and recycles glycolate into usable metabolic products through reactions spanning the chloroplast, mitochondrion, and peroxisome. Catalase in peroxisomes plays an important role in this process by disproportionating H₂O₂resulting from glycolate oxidation into O₂and water. We hypothesize that catalase in the peroxisome also protects against nonenzymatic decarboxylations between hydrogen peroxide and photorespiratory intermediates (glyoxylate and/or hydroxypyruvate). We test this hypothesis by detailed gas exchange and biochemical analysis ofArabidopsis thalianamutants lacking peroxisomal catalase. Our results strongly support this hypothesis, with catalase mutants showing gas exchange evidence for an increased stoichiometry of CO₂release from photorespiration, specifically an increase in the CO₂compensation point, a photorespiratory‐dependent decrease in the quantum efficiency of CO₂assimilation, increase in the¹²CO₂released in a¹³CO₂background, and an increase in the postillumination CO₂burst. Further metabolic evidence suggests this excess CO₂release occurred via the nonenzymatic decarboxylation of hydroxypyruvate. Specifically, the catalase mutant showed an accumulation of photorespiratory intermediates during a transient increase in rubisco oxygenation consistent with this hypothesis. Additionally, end products of alternative hypotheses explaining this excess release were similar between wild type and catalase mutants. Furthermore, the calculated rate of hydroxypyruvate decarboxylation in catalase mutant is much higher than that of glyoxylate decarboxylation. This work provides evidence that these nonenzymatic decarboxylation reactions, predominately hydroxypyruvate decarboxylation, can occur in vivo when photorespiratory metabolism is genetically disrupted. 

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5. Coral larvae increase nitrogen assimilation to stabilize algal symbiosis and combat bleaching under increased temperature

   https://doi.org/10.1371/journal.pbio.3002875  

   Huffmyer, Ariana S; Ashey, Jill; Strand, Emma; Chiles, Eric N; Su, Xiaoyang; Putnam, Hollie M (November 2024, PLOS Biology)

   Moran, Nancy A (Ed.)

   Rising sea surface temperatures are increasingly causing breakdown in the nutritional relationship between corals and algal endosymbionts (Symbiodiniaceae), threatening the basis of coral reef ecosystems and highlighting the critical role of coral reproduction in reef maintenance. The effects of thermal stress on metabolic exchange (i.e., transfer of fixed carbon photosynthates from symbiont to host) during sensitive early life stages, however, remains understudied. We exposed symbiotic Montipora capitata coral larvae in Hawaiʻi to high temperature (+2.5°C for 3 days), assessed rates of photosynthesis and respiration, and used stable isotope tracing (4 mM 13C sodium bicarbonate; 4.5 h) to quantify metabolite exchange. While larvae did not show any signs of bleaching and did not experience declines in survival and settlement, metabolic depression was significant under high temperature, indicated by a 19% reduction in respiration rates, but with no change in photosynthesis. Larvae exposed to high temperature showed evidence for maintained translocation of a major photosynthate, glucose, from the symbiont, but there was reduced metabolism of glucose through central carbon metabolism (i.e., glycolysis). The larval host invested in nitrogen cycling by increasing ammonium assimilation, urea metabolism, and sequestration of nitrogen into dipeptides, a mechanism that may support the maintenance of glucose translocation under thermal stress. Host nitrogen assimilation via dipeptide synthesis appears to be used for nitrogen limitation to the Symbiodiniaceae, and we hypothesize that nitrogen limitation contributes to retention of fixed carbon by favoring photosynthate translocation to the host. Collectively, our findings indicate that although these larvae are susceptible to metabolic stress under high temperature, diverting energy to nitrogen assimilation to maintain symbiont population density, photosynthesis, and carbon translocation may allow larvae to avoid bleaching and highlights potential life stage specific metabolic responses to stress. 

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