skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Title: Divide and conquer: Spatial and temporal resource partitioning structures benthic cyanobacterial mats
Abstract Benthic cyanobacterial mats are increasing in abundance worldwide with the potential to degrade ecosystem structure and function. Understanding mat community dynamics is thus critical for predicting mat growth and proliferation and for mitigating any associated negative effects. Carbon, nitrogen, and sulfur cycling are the predominant forms of nutrient cycling discussed within the literature, while metabolic cooperation and viral interactions are understudied. Although many forms of nutrient cycling in mats have been assessed, the links between niche dynamics, microbial interactions, and nutrient cycling are not well described. Here, we present an updated review on how nutrient cycling and microbial community interactions in mats are structured by resource partitioning via spatial and temporal heterogeneity and succession. We assess community interactions and nutrient cycling at both intramat and metacommunity scales. Additionally, we present ideas and recommendations for research in this area, highlighting top‐down control, boundary layers, and metabolic cooperation as important future directions.  more » « less
Award ID(s):
2239425
PAR ID:
10495163
Author(s) / Creator(s):
 ;  
Publisher / Repository:
Wiley-Blackwell
Date Published:
Journal Name:
Journal of Phycology
Volume:
60
Issue:
2
ISSN:
0022-3646
Format(s):
Medium: X Size: p. 254-272
Size(s):
p. 254-272
Sponsoring Org:
National Science Foundation
More Like this
  1. Abstract Primary production is fundamental to ecosystems, and in many extreme environments production is facilitated by microbial mats. Microbial mats are complex assemblages of photo- and heterotrophic microorganisms colonizing sediment and soil surfaces. These communities are the dominant producers of the McMurdo Dry Valleys, Antarctica, where they occupy lentic and lotic environments as well as intermittently wet soils. While the influence of microbial mats on stream nutrient dynamics and lake organic matter cycling is well documented, the influence of microbial mats on underlying soil is less well understood, particularly the effects of microbial mat nitrogen and carbon fixation. Taylor Valley soils occur across variable levels of inorganic phosphorus availability, with the Ross Sea drift containing four times that of the Taylor drifts, providing opportunities to examine how soil geochemistry influences microbial mats and the ecological functions they regulate. We found that inorganic phosphorus availability is positively correlated with microbial mat biomass, pigment concentration and nitrogen fixation potential. Additionally, our results demonstrate that dense microbial mats influence the ecological functioning of underlying soils by enriching organic carbon and total nitrogen stocks (two times higher). This work contributes to ongoing questions regarding the sources of energy fuelling soil food webs and the regional carbon balance in the McMurdo Dry Valleys. 
    more » « less
  2. Abstract Pulses of resource availability along environmental gradients can filter the local and regional distribution of macrophyte and microbial mat communities in wetlands. Wetlands that experience short hydroperiods (i.e., <6 months with standing water) may cause macrophyte and microbial mat competition for water. However, the stress gradient hypothesis predicts that abiotic stress should increase facilitative co‐regulation of producer dynamics. To determine if and how macrophyte and microbial mat biomass covary along a hydrologic gradient, we conducted two observational surveys and a biomass removal experiment in Everglades National Park, FL, USA. In the survey, macrophyte and microbial mat biomass were measured over a two‐year period across nine hydrologically regulated macrophyte community types to determine drivers of biomass and macrophyte–microbial mat interactions along a hydroperiod gradient (3–8 months) using a structural equation model. In the experiment, the effect of hydrology on the interaction between macrophytes and microbial mats was quantified by measuring the effect of bimonthly removal of macrophyte or microbial mat biomass on the biomass of both communities in plots in wetlands with contrasting hydroperiods (3–6 months). Hydrology and biological interactions influenced macrophyte and microbial mat biomass, with stronger interactions observed in the shortest hydroperiod transect sites dominated bySchoenus nigricansandCladium jamaicense. Along the hydrologic gradient, we found direct negative effects of macrophyte biomass on microbial biomass and vice versa, and a significant positive effect of microbial response to flooding duration on macrophyte biomass. Experimental macrophyte removal in shorter‐hydroperiod wetlands resulted in a significant increase in microbial biomass while microbial mat removal reduced biomass of the dominant macrophyteC. jamaicense. The facilitative effect of microbial mats on macrophyte biomass in shorter‐hydroperiod wetlands may be driven by mats prolonging soil moisture retention due to their desiccation‐resistant structure. Stress‐induced facilitation supported the stress gradient hypothesis across the short‐hydrologic gradient, while competitive interactions were also observed. As climate and human drivers continue altering hydrology in aquatic systems, the type and strength of community interactions will continue to shift and alter distributions across the landscape. 
    more » « less
  3. Abstract In principle, iron oxidation can fuel significant primary productivity and nutrient cycling in dark environments such as the deep sea. However, we have an extremely limited understanding of the ecology of iron-based ecosystems, and thus the linkages between iron oxidation, carbon cycling, and nitrate reduction. Here we investigate iron microbial mats from hydrothermal vents at Lōʻihi Seamount, Hawaiʻi, using genome-resolved metagenomics and metatranscriptomics to reconstruct potential microbial roles and interactions. Our results show that the aerobic iron-oxidizing Zetaproteobacteria are the primary producers, concentrated at the oxic mat surface. Their fixed carbon supports heterotrophs deeper in the mat, notably the second most abundant organism, Candidatus Ferristratum sp. (uncultivated gen. nov.) from the uncharacterized DTB120 phylum. Candidatus Ferristratum sp., described using nine high-quality metagenome-assembled genomes with similar distributions of genes, expressed nitrate reduction genes narGH and the iron oxidation gene cyc2 in situ and in response to Fe(II) in a shipboard incubation, suggesting it is an anaerobic nitrate-reducing iron oxidizer. Candidatus Ferristratum sp. lacks a full denitrification pathway, relying on Zetaproteobacteria to remove intermediates like nitrite. Thus, at Lōʻihi, anaerobic iron oxidizers coexist with and are dependent on aerobic iron oxidizers. In total, our work shows how key community members work together to connect iron oxidation with carbon and nitrogen cycling, thus driving the biogeochemistry of exported fluids. 
    more » « less
  4. Abstract The meltwater streams of the McMurdo Dry Valleys are hot spots of biological diversity in the climate-sensitive polar desert landscape. Microbial mats, largely comprised of cyanobacteria, dominate the streams which flow for a brief window of time (~10 weeks) over the austral summer. These communities, critical to nutrient and carbon cycling, display previously uncharacterized patterns of rapid destabilization and recovery upon exposure to variable and physiologically detrimental conditions. Here, we characterize changes in biodiversity, transcriptional responses and activity of microbial mats in response to hydrological disturbance over spatiotemporal gradients. While diverse metabolic strategies persist between marginal mats and main channel mats, data collected from 4 time points during the austral summer revealed a homogenization of the mat communities during the mid-season peak meltwater flow, directly influencing the biogeochemical roles of this stream ecosystem. Gene expression pattern analyses identified strong functional sensitivities of nitrogen-fixing marginal mats to changes in hydrological activities. Stress response markers detailed the environmental challenges of each microhabitat and the molecular mechanisms underpinning survival in a polar desert ecosystem at the forefront of climate change. At mid and end points in the flow cycle, mobile genetic elements were upregulated across all mat types indicating high degrees of genome evolvability and transcriptional synchronies. Additionally, we identified novel antifreeze activity in the stream microbial mats indicating the presence of ice-binding proteins (IBPs). Cumulatively, these data provide a new view of active intra-stream diversity, biotic interactions and alterations in ecosystem function over a high-flow hydrological regime. 
    more » « less
  5. Bernstein, Hans C. (Ed.)
    ABSTRACT Cyanobacterial mats profoundly influenced Earth’s biological and geochemical evolution and still play important ecological roles in the modern world. However, the biogeochemical functioning of cyanobacterial mats under persistent low-O 2 conditions, which dominated their evolutionary history, is not well understood. To investigate how different metabolic and biogeochemical functions are partitioned among community members, we conducted metagenomics and metatranscriptomics on cyanobacterial mats in the low-O 2 , sulfidic Middle Island sinkhole (MIS) in Lake Huron. Metagenomic assembly and binning yielded 144 draft metagenome assembled genomes, including 61 of medium quality or better, and the dominant cyanobacteria and numerous Proteobacteria involved in sulfur cycling. Strains of a Phormidium autumnale -like cyanobacterium dominated the metagenome and metatranscriptome. Transcripts for the photosynthetic reaction core genes psaA and psbA were abundant in both day and night. Multiple types of psbA genes were expressed from each cyanobacterium, and the dominant psbA transcripts were from an atypical microaerobic type of D1 protein from Phormidium . Further, cyanobacterial transcripts for photosystem I genes were more abundant than those for photosystem II, and two types of Phormidium sulfide quinone reductase were recovered, consistent with anoxygenic photosynthesis via photosystem I in the presence of sulfide. Transcripts indicate active sulfur oxidation and reduction within the cyanobacterial mat, predominately by Gammaproteobacteria and Deltaproteobacteria , respectively. Overall, these genomic and transcriptomic results link specific microbial groups to metabolic processes that underpin primary production and biogeochemical cycling in a low-O 2 cyanobacterial mat and suggest mechanisms for tightly coupled cycling of oxygen and sulfur compounds in the mat ecosystem. IMPORTANCE Cyanobacterial mats are dense communities of microorganisms that contain photosynthetic cyanobacteria along with a host of other bacterial species that play important yet still poorly understood roles in this ecosystem. Although such cyanobacterial mats were critical agents of Earth’s biological and chemical evolution through geological time, little is known about how they function under the low-oxygen conditions that characterized most of their natural history. Here, we performed sequencing of the DNA and RNA of modern cyanobacterial mat communities under low-oxygen and sulfur-rich conditions from the Middle Island sinkhole in Lake Huron. The results reveal the organisms and metabolic pathways that are responsible for both oxygen-producing and non-oxygen-producing photosynthesis as well as interconversions of sulfur that likely shape how much O 2 is produced in such ecosystems. These findings indicate tight metabolic reactions between community members that help to explain the limited the amount of O 2 produced in cyanobacterial mat ecosystems. 
    more » « less