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1. Molecular insights into deuterostome evolution from hemichordate developmental biology

   Christopher J Lowe (April 2021, Current Topics in Developmental Biology)

   Gilbert, Scott (Ed.)

   Hemichordates, along with echinoderms and chordates, belong to the lineage of bilaterians called the deuterostomes. Their phylogenetic position as an outgroup to chordates provides an opportunity to investigate the evolutionary origins of the chor- date body plan and reconstruct ancestral deuterostome characters. The body plans of the hemichordates and chordates are organizationally divergent making anatomical comparisons very challenging. The developmental underpinnings of animal body plans are often more conservative than the body plans they regulate, and offer a novel data set for making comparisons between morphologically divergent body architectures. Here I review the hemichordate developmental data generated over the past 20 years that further test hypotheses of proposed morphological affinities between the two taxa, but also compare the conserved anteroposterior, dorsoventral axial patterning pro- grams and germ layer specification programs. These data provide an opportunity to determine which developmental programs are ancestral deuterostome or bilaterian innovations, and which ones occurred in stem chordates or vertebrates representing developmental novelties of the chordate body plan. 

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2. Genomic insights of body plan transitions from bilateral to pentameral symmetry in Echinoderms

   https://doi.org/https://doi.org/10.1038/s42003-020-1091-1  

   Li, Y.; Omori, A.; Flores, R.L.; Satterfield, S.; Nguyen, C.; Ota, T.; Tsurugaya, T.; Ikuta, T.; Ikeo, K.; Kikuchi, M.; et al (July 2020, Communications biology)

   null (Ed.)

   Echinoderms are an exceptional group of bilaterians that develop pentameral adult symmetry from a bilaterally symmetric larva. However, the genetic basis in evolution and development of this unique transformation remains to be clarified. Here we report newly sequenced genomes, developmental transcriptomes, and proteomes of diverse echinoderms including the green sea urchin (L. variegatus), a sea cucumber (A. japonicus), and with particular emphasis on a sister group of the earliest-diverged echinoderms, the feather star (A. japonica). We learned that the last common ancestor of echinoderms retained a well-organized Hox cluster reminiscent of the hemichordate, and had gene sets involved in endoskeleton development. Further, unlike in other animal groups, the most conserved developmental stages were not at the body plan establishing phase, and genes normally involved in bilaterality appear to function in pentameric axis development. These results enhance our understanding of the divergence of protostomes and deuterostomes almost 500 Mya. 

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3. The embryology, metamorphosis, and muscle development of Schizocardium karankawa sp. nov. (Enteropneusta) from the Gulf of Mexico

   https://doi.org/10.1186/s13227-023-00212-0  

   Jabr, Noura; Gonzalez, Paul; Kocot, Kevin M.; Cameron, Christopher B. (December 2023, EvoDevo)

   Abstract Schizocardium karankawa  sp. nov. has been collected from subtidal muds of the Laguna Madre, Texas, and the Mississippi coast, Gulf of Mexico. The Texas population is reproductive from early February to mid-April. Gametes are liberated by a small incision in a gonad. Oocyte germinal vesicle breakdown is increased in the presence of sperm, and the highest fertilization success was in the artificial seawater Jamarin U. Manually dechorionated embryos develop normally. Development was asynchronous via a tornaria larva, metamorphosis and maintained to the juvenile worm 6 gill-pore stage. Phalloidin-labeled late-stage tornaria revealed retractor muscles that connect the pericardial sac with the apical tuft anteriorly, the oesophagus ventrally, and muscle cells of the early mesocoels. The muscle development of early juvenile worms began with dorso-lateral trunk muscles, lateral trunk bands, and sphincters around the gill pores and anus. Adult worms are characterized by a stomochord that bifurcates anteriorly into paired vermiform processes, gill bars that extend almost the entire dorsal to ventral branchial region resulting in a narrow ventral hypobranchial ridge, and an elaborate epibranchial organ with six zones of discrete cell types. The trunk has up to three rows of liver sacs, and lateral gonads. The acorn worm evo-devo model species  Saccoglossus kowalevskii ,  Ptychodera flava , and  Schizocardium   californicum  are phylogenetically distant with disparate life histories. S. karnakawa  from  S.   californicum  are phylogenetically close, and differences between them that become apparent as adult worms include the number of gill pores and hepatic sacs, and elaborations of the heart–kidney–stomochord complex. An important challenge for evolutionary developmental biology is to form links from phylogenetically distant and large-scale differences to phylogenetically close and small-scale differences. This description of the embryology, development, and adult morphology of S. karankawa permits investigations into how acorn worm development evolves at fine scales. 

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4. Transcription Factors of the Alx Family: Evolutionarily Conserved Regulators of Deuterostome Skeletogenesis

   https://doi.org/10.3389/fgene.2020.569314  

   Khor, Jian Ming; Ettensohn, Charles A. (November 2020, Frontiers in Genetics)

   Members of the alx gene family encode transcription factors that contain a highly conserved Paired-class, DNA-binding homeodomain, and a C-terminal OAR/Aristaless domain. Phylogenetic and comparative genomic studies have revealed complex patterns of alx gene duplications during deuterostome evolution. Remarkably, alx genes have been implicated in skeletogenesis in both echinoderms and vertebrates. In this review, we provide an overview of current knowledge concerning alx genes in deuterostomes. We highlight their evolutionarily conserved role in skeletogenesis and draw parallels and distinctions between the skeletogenic gene regulatory circuitries of diverse groups within the superphylum. 

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5. Approaches to understanding echinoderm origins. Part 1: Conceptual and empirical models

   Lefebrvre, B; Mooi, R; Guensburg, T; Dupichaud, C; Nohejlova, M (October 2024, Cahiers de Biologie Marine)

   Davoult, D (Ed.)

   Abstract: Echinoderms are so highly derived compared with other deuterostomes, including their sister group, hemichordates, that comparisons of body plans are sometimes accompanied by points of view enjoying varying levels of morphological, paleontological, and especially, embryological support. No echinoderm taxon has been the subject of more contentious debate than the carpoids, a disparate assemblage of non-pentaradial, flattened echinoderms that includes the Cincta, Ctenocystoidea, Soluta, and Stylophora. Because of their unusual morphologies, the phylogenetic position and significance of carpoids concerning the origins of the Echinodermata are still being evaluated. A detailed review of carpoid research over the past century and a half reveals that the debate largely results from methodological issues employing two basic, but very different models. Conceptual models, usually imbued with Haeckelian principles, consider the absence of a single character (pentaradial symmetry) as a recapitulation of the pre-metamorphic larval stage of echinoderms, forcing unusual taxa that also lack pentaradiality down the phylum's phylogenetic tree. Such scenarios assume that first echinoderms had a bilaterian-type anterior-posterior axis. Empirical models rely on comparison of non-pentaradial early forms with a wide array of data obtained from extant and fossil echinoderms. These data support a view in which larval morphologies of echinoderms are not represented in the fossil record of echinoderms, and that pentaradial symmetry was secondarily lost in carpoids, just as it was in many other coeval types of echinoderms. 

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