skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Title: Assessing predictability of environmental time series with statistical and machine learning models
Abstract The ever increasing popularity of machine learning methods in virtually all areas of science, engineering and beyond is poised to put established statistical modeling approaches into question. Environmental statistics is no exception, as popular constructs such as neural networks and decision trees are now routinely used to provide forecasts of physical processes ranging from air pollution to meteorology. This presents both challenges and opportunities to the statistical community, which could contribute to the machine learning literature with a model‐based approach with formal uncertainty quantification. Should, however, classical statistical methodologies be discarded altogether in environmental statistics, and should our contribution be focused on formalizing machine learning constructs? This work aims at providing some answers to this thought‐provoking question with two time series case studies where selected models from both the statistical and machine learning literature are compared in terms of forecasting skills, uncertainty quantification and computational time. Relative merits of both class of approaches are discussed, and broad open questions are formulated as a baseline for a discussion on the topic.  more » « less
Award ID(s):
2014166
PAR ID:
10531619
Author(s) / Creator(s):
 ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  ;  
Publisher / Repository:
Wiley Blackwell (John Wiley & Sons)
Date Published:
Journal Name:
Environmetrics
ISSN:
1180-4009
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Abstract Obtaining accurate estimates of machine learning model uncertainties on newly predicted data is essential for understanding the accuracy of the model and whether its predictions can be trusted. A common approach to such uncertainty quantification is to estimate the variance from an ensemble of models, which are often generated by the generally applicable bootstrap method. In this work, we demonstrate that the direct bootstrap ensemble standard deviation is not an accurate estimate of uncertainty but that it can be simply calibrated to dramatically improve its accuracy. We demonstrate the effectiveness of this calibration method for both synthetic data and numerous physical datasets from the field of Materials Science and Engineering. The approach is motivated by applications in physical and biological science but is quite general and should be applicable for uncertainty quantification in a wide range of machine learning regression models. 
    more » « less
  2. New technologies have led to vast troves of large and complex data sets across many scientific domains and industries. People routinely use machine learning techniques not only to process, visualize, and make predictions from these big data, but also to make data-driven discoveries. These discoveries are often made using interpretable machine learning, or machine learning models and techniques that yield human-understandable insights. In this article, we discuss and review the field of interpretable machine learning, focusing especially on the techniques, as they are often employed to generate new knowledge or make discoveries from large data sets. We outline the types of discoveries that can be made using interpretable machine learning in both supervised and unsupervised settings. Additionally, we focus on the grand challenge of how to validate these discoveries in a data-driven manner, which promotes trust in machine learning systems and reproducibility in science. We discuss validation both from a practical perspective, reviewing approaches based on data-splitting and stability, as well as from a theoretical perspective, reviewing statistical results on model selection consistency and uncertainty quantification via statistical inference. Finally, we conclude byhighlighting open challenges in using interpretable machine learning techniques to make discoveries, including gaps between theory and practice for validating data-driven discoveries. 
    more » « less
  3. Abstract Neural networks (NN) have become an important tool for prediction tasks—both regression and classification—in environmental science. Since many environmental-science problems involve life-or-death decisions and policy making, it is crucial to provide not only predictions but also an estimate of the uncertainty in the predictions. Until recently, very few tools were available to provide uncertainty quantification (UQ) for NN predictions. However, in recent years the computer-science field has developed numerous UQ approaches, and several research groups are exploring how to apply these approaches in environmental science. We provide an accessible introduction to six of these UQ approaches, then focus on tools for the next step, namely, to answer the question:Once we obtain an uncertainty estimate (using any approach), how do we know whether it is good or bad?To answer this question, we highlight four evaluation graphics and eight evaluation scores that are well suited for evaluating and comparing uncertainty estimates (NN based or otherwise) for environmental-science applications. We demonstrate the UQ approaches and UQ-evaluation methods for two real-world problems: 1) estimating vertical profiles of atmospheric dewpoint (a regression task) and 2) predicting convection over Taiwan based onHimawari-8satellite imagery (a classification task). We also provide Jupyter notebooks with Python code for implementing the UQ approaches and UQ-evaluation methods discussed herein. This article provides the environmental-science community with the knowledge and tools to start incorporating the large number of emerging UQ methods into their research. Significance StatementNeural networks are used for many environmental-science applications, some involving life-or-death decision-making. In recent years new methods have been developed to provide much-needed uncertainty estimates for NN predictions. We seek to accelerate the adoption of these methods in the environmental-science community with an accessible introduction to 1) methods for computing uncertainty estimates in NN predictions and 2) methods for evaluating such estimates. 
    more » « less
  4. Abstract To improve the predictability of complex computational models in the experimentally-unknown domains, we propose a Bayesian statistical machine learning framework utilizing the Dirichlet distribution that combines results of several imperfect models. This framework can be viewed as an extension of Bayesian stacking. To illustrate the method, we study the ability of Bayesian model averaging and mixing techniques to mine nuclear masses. We show that the global and local mixtures of models reach excellent performance on both prediction accuracy and uncertainty quantification and are preferable to classical Bayesian model averaging. Additionally, our statistical analysis indicates that improving model predictions through mixing rather than mixing of corrected models leads to more robust extrapolations. 
    more » « less
  5. Abstract There has been a great deal of recent interest in the development of spatial prediction algorithms for very large datasets and/or prediction domains. These methods have primarily been developed in the spatial statistics community, but there has been growing interest in the machine learning community for such methods, primarily driven by the success of deep Gaussian process regression approaches and deep convolutional neural networks. These methods are often computationally expensive to train and implement and consequently, there has been a resurgence of interest in random projections and deep learning models based on random weights—so called reservoir computing methods. Here, we combine several of these ideas to develop the random ensemble deep spatial (REDS) approach to predict spatial data. The procedure uses random Fourier features as inputs to an extreme learning machine (a deep neural model with random weights), and with calibrated ensembles of outputs from this model based on different random weights, it provides a simple uncertainty quantification. The REDS method is demonstrated on simulated data and on a classic large satellite data set. 
    more » « less