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Abstract Interactions between plants and soil microbes can influence plant population dynamics and diversity in plant communities. Traditional theoretical paradigms view the microbial community as a black box with net effects described by phenomenological models.This approach struggles to quantify the importance of plant–microbe interactions relative to other competition and coexistence mechanisms and to explain context dependence in microbe effects.We argue that a mechanistic framework focused on microbial functional groups will lead to conceptual and empirical advances, as demonstrated by extending resource ratio theory to plant–microbe interactions. We review the diverse pathways by which different microbial functional groups can influence plant resource competition. Finally, we suggest approaches to link theory with observations to measure the key parameters of our framework.Synthesis: Our review highlights recent experimental advancements for uncovering microbial mechanisms that alter plant host resource competition and coexistence. We synthesize these mechanisms into a conceptual model that provides a framework for future experiments to investigate the importance of plant–microbe interactions in structuring plant populations and communities.
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Soil mycobiome dissimilarity, independent of fungal guild, is associated with increased probability of plant coexistence
Major theories regarding microbe‐mediated plant community dynamics assume that plant species cultivate distinct microbial communities. However, few studies empirically assess the role of species‐associated microbial community dissimilarity in plant competitive dynamics. In this study, we paired a competition experiment between eight annual forbs with characterisation of species‐associated fungal communities to assess whether mycobiome dissimilarity is associated with pairwise competitive dynamics.
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- Award ID(s):
- 2125586
- PAR ID:
- 10537338
- Publisher / Repository:
- Journal of Ecology
- Date Published:
- Journal Name:
- Journal of Ecology
- ISSN:
- 0022-0477
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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Summary The scope of plant control over its microbiome is a central question in evolutionary biology and agriculture. Leaf traits are known to shape pathogen colonization and disease development, but their impact on the broader community of largely non‐pathogenic fungi that colonize plant leaves remains an open question.We used reciprocal common gardens of the model tree,Populus trichocarpa(black cottonwood), to examine relationships between leaf traits and the leaf mycobiome in two strongly contrasting environments. We measured six leaf traits (stomatal length, stomatal density, carbon‐to‐nitrogen ratio, leaf thickness, leaf dry matter content, and specific leaf area) and used fungal marker gene sequencing to characterize leaf fungal communities for 57 tree genotypes replicated in one mesic and one xeric common garden (809 trees).Several leaf traits covaried with the leaf mycobiome, yet one relationship was paramount: plant genotypes with longer, sparser leaf stomata hosted a greater richness and diversity of more similar fungal species compared to plant genotypes with shorter, denser leaf stomata.These relationships, while modulated by the environment plants were sourced from and grown in, suggest that stomatal traits may be a general mechanism through which plants and the leaf mycobiome influence one another.more » « less
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Abstract As plant communities respond to global change, there is an urgent need to understand the role of biotic interactions in shaping plant communities' dynamics. Plants simultaneously interact with antagonists and mutualists, and understanding plant community responses to global change requires embracing the complexity of biotic interactions.This cross‐journal Special Feature compiled nine research articles and two mini‐reviews, each investigating multitrophic interactions, such as plant–insect–mycorrhizae, leaf–mycobiome or seed–mycobiome.We organized these papers around five main themes which highlight the complexity of biotic interactions, their context dependency, the impacts of global change on multitrophic interactions, the use of plant–soil feedback experiments and the consequences of multitrophic interactions for plant communities.Synthesis. The articles in this cross‐journal Special Feature highlighted important research directions that would help understand the role of beneficial fungi in moderating plant–enemy interactions and plant community structure. In particular, we recommend the need for more experimental studies manipulating multitrophic interactions and geographically replicated experiments to understand the context dependency and the impacts of climate on these complex interactions.more » « less
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Abstract Understanding the mechanisms that promote the coexistence of hundreds of species over small areas in tropical forest remains a challenge. Many tropical tree species are presumed to be functionally equivalent shade tolerant species but exist on a continuum of performance trade‐offs between survival in shade and the ability to quickly grow in sunlight. These trade‐offs can promote coexistence by reducing fitness differences.Variation in plant functional traits related to resource acquisition is thought to predict variation in performance among species, perhaps explaining community assembly across habitats with gradients in resource availability. Many studies have found low predictive power, however, when linking trait measurements to species demographic rates.Seedlings face different challenges recruiting on the forest floor and may exhibit different traits and/or performance trade‐offs than older individuals face in the eventual adult niche. Seed mass is the typical proxy for seedling success, but species also differ in cotyledon strategy (reserve vs. photosynthetic) or other leaf, stem and root traits. These can cause species with the same average seed mass to have divergent performance in the same habitat.We combined long‐term studies of seedling dynamics with functional trait data collected at a standard life‐history stage in three diverse neotropical forests to ask whether variation in coordinated suites of traits predicts variation among species in demographic performance.Across hundreds of species in Ecuador, Panama and Puerto Rico, we found seedlings displayed correlated suites of leaf, stem, and root traits, which strongly correlated with seed mass and cotyledon strategy. Variation among species in seedling functional traits, seed mass, and cotyledon strategy were strong predictors of trade‐offs in seedling growth and survival. These results underscore the importance of matching the ontogenetic stage of the trait measurement to the stage of demographic dynamics.Our findings highlight the importance of cotyledon strategy in addition to seed mass as a key component of seed and seedling biology in tropical forests because of the contribution of carbon reserves in storage cotyledons to reducing mortality rates and explaining the growth‐survival trade‐off among species.Synthesis: With strikingly consistent patterns across three tropical forests, we find strong evidence for the promise of functional traits to provide mechanistic links between seedling form and demographic performance.more » « less
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Abstract Many studies identify fungal and oomycete phytopathogens as natural enemies capable of influencing plant species composition and promoting diversity in plant communities. However, little is known about how plant‐pathogen interactions vary along regional abiotic gradients or with tree species characteristics, which limits our understanding of the causes of variation in tree species richness.We surveyed 10,756 seedlings from 272 tree species for disease symptoms along a mean annual precipitation gradient in the tropical wet forests of Central Panama for 3 months in the early wet season (June–August) and 2 months in the following dry season (March–April). Over 99% of observed disease symptoms were caused by necrotrophic foliar pathogens, while less than 1% of symptoms were attributed to soilborne pathogens. Foliar disease incidence was inversely related to mean annual precipitation, a pattern which may be due to greater disease susceptibility among dry forest species.Foliar disease incidence increased with conspecific seedling density but did not respond to the proximity of conspecific adults. Although foliar disease incidence decreased as mean annual precipitation increased, the strength of conspecific density‐ or distance‐dependence was independent of the precipitation gradient.Seedlings of common tree species and species dispersed by non‐flying mammals had a higher risk of foliar pathogen incidence. Increased disease in common species may help reduce their dominance.Synthesis. The increases in foliar pathogen incidence with conspecific seedling density, species abundance, and dispersal mechanism indicate that foliar disease incidence is non‐random and may contribute to the regulation of tropical plant communities and species coexistence. Furthermore, the relationships between foliar disease incidence, dispersal mechanism and precipitation suggest plant‐pathogen interactions could shift as a response to climate change and disruption of the disperser community.more » « less
- Free Publicly Accessible Full Text
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Accepted Manuscript
- Journal Article:
- https://doi.org/10.1111/1365-2745.14396
