skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Title: Spatiotemporal dynamics of nucleocytoplasmic transport
Nucleocytoplasmic transport is essential for cellular function, presenting a canonical example of rapid molecular sorting inside cells. It consists of a coordinated interplay between import/export of molecules in/out the cell nucleus. Here, we investigate the role of spatiotemporal dynamics of the nucleocytoplasmic transport and its regulation. We develop a biophysical model that captures the main features of the nucleocytoplasmic transport, in particular, its regulation through the Ran cycle. Our model yields steady-state profiles for the molecular components of the Ran cycle, their relaxation times, as well as the nuclear-to-cytoplasmic molecule ratio. We show that these quantities are affected by their spatial dynamics and heterogeneity within the nucleus. Specifically, we find that the spatial nonuniformity of Ran guanine exchange factor (RanGEF)—particularly its proximity to the nuclear envelope—increases the Ran content in the nucleus. We further show that RanGEF's accumulation near the nuclear envelope results from its intrinsic dynamics as a nuclear cargo, transported by the Ran cycle itself. Overall, our work highlights the critical role of molecular spatial dynamics in cellular processes and proposes new avenues for theoretical and experimental inquiries into the nucleocytoplasmic transport. Published by the American Physical Society2024  more » « less
Award ID(s):
2153432 2210541 1554880 1762506
PAR ID:
10611813
Author(s) / Creator(s):
; ;
Publisher / Repository:
APS
Date Published:
Journal Name:
Physical Review Research
Volume:
6
Issue:
4
ISSN:
2643-1564
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. The neutrino research program in the coming decades will require improved precision. A major source of uncertainty is the interaction of neutrinos with nuclei that serve as targets for such experiments. Broadly speaking, this interaction often depends, e.g., for charge-current quasielastic scattering, on the combination of “nucleon physics,” expressed by form factors, and “nuclear physics,” expressed by a nuclear model. It is important to get a good handle on both. We present a fully analytic implementation of the correlated Fermi gas model for electron-nucleus and charge-current quasielastic neutrino-nucleus scattering. The implementation is used to compare separately form factors and nuclear model effects for both electron-carbon and neutrino-carbon scattering data. Published by the American Physical Society2025 
    more » « less
  2. We consider the potential for a 10 kg undoped cryogenic CsI detector operating at the Spallation Neutron Source to measure coherent elastic neutrino-nucleus scattering and its sensitivity to discover new physics beyond the standard model (BSM). Through a combination of increased event rate, lower threshold, and good timing resolution, such a detector would significantly improve on past measurements. We considered tests of several BSM scenarios such as neutrino nonstandard interactions and accelerator-produced dark matter. This detector’s performance was also studied for relevant questions in nuclear physics and neutrino astronomy, namely the weak charge distribution of Cs and I nuclei and detection of neutrinos from a core-collapse supernova. Published by the American Physical Society2024 
    more » « less
  3. Measurements of the difference between the squared charge radii of the helion ( He 3 nucleus) and the α particle ( He 4 nucleus) have been characterized by longstanding tensions recently spotlighted in the 3.6 σ discrepancy of the extractions from ordinary atoms versus those from muonic atoms [Karsten Schuhmann , ]. Here, we present a novel analysis of uncertainties in nuclear structure corrections that must be supplied by theory to enable the extraction of the difference in radii from spectroscopic experiments. We use modern Bayesian inference techniques to quantify uncertainties stemming from the truncation of the chiral effective field theory expansion of the nuclear force for both muonic and ordinary atoms. With the new nuclear structure input, the helium isotope-shift puzzle cannot be explained, rather, it is reinforced to a 4 σ discrepancy. Published by the American Physical Society2025 
    more » « less
  4. Complex multiscale flows associated with instabilities and turbulence are commonly induced under high-energy density (HED) conditions, but accurate measurement of their transport properties has been challenging. x-ray photon correlation spectroscopy (XPCS) with coherent xx-ray sources can, in principle, probe material dynamics to infer transport properties using time autocorrelation of density fluctuations. Here we develop a theoretical framework for utilizing XPCS to study material diffusivity in multiscale flows. We extend single-scale shear flow theories to broadband flows using a multiscale analysis that captures shear and diffusion dynamics. Our theory is validated with simulated XPCS for Brownian particles advected in multiscale flows. We demonstrate the versatility of the method over several orders of magnitude in timescale using sequential-pulse XPCS, single-pulse xx-ray speckle visibility spectroscopy (XSVS), and double-pulse XSVS. Published by the American Physical Society2025 
    more » « less
  5. No AbstractPublished by the Jagiellonian University2024authors 
    more » « less