Accurate inventories of terrestrial carbon pools and fluxes are crucial for understanding ecosystem processes, tracking climate change impacts, and meeting the monitoring, reporting, and verification (MRV) requirements in international treaties and voluntary carbon markets. In meeting this need, the fusion of process‐based modeling, field data, and remote sensing observations has the potential to provide more accurate and precise estimates than each alone. However, as the number of data constraints on a system increases, different sources of information can interact with each other in complex ways across space, time, and processes. In this study, we undertake a value‐of‐information analysis to assess the contribution of different observations to reducing carbon cycle uncertainties across pools, fluxes, and spatial domains within the PEcAn carbon cycle data assimilation system. We used a novel block‐based Tobit Gamma Ensemble Filter to assimilate four synergistic data constraints, MODIS leaf area index, Landtrendr aboveground biomass, SMAP soil moisture, and SoilGrids soil organic C, into a process‐based ecosystem model (SIPNET) at 39 National Ecological Observatory Network sites across the contiguous United States from 2012 to 2021. Results showed that Soil and Wood C contribute most to the total C uncertainty, and not only did we greatly reduce uncertainty and residual error in the directly constrained pools, but many observations also shared information across variables and space, leading to reductions in both uncertainty and residual errors across variables and locations. These indirect constraints helped identify synergies and conflicts among data streams and across space, which provide insights for further constraining carbon inventories. Overall, soil carbon remains the largest source of uncertainty in the overall carbon budget due to both its large size and limited observational constraints.
more »
« less
Combining Observations and Models: A Review of the CARDAMOM Framework for Data‐Constrained Terrestrial Ecosystem Modeling
ABSTRACT The rapid increase in the volume and variety of terrestrial biosphere observations (i.e., remote sensing data and in situ measurements) offers a unique opportunity to derive ecological insights, refine process‐based models, and improve forecasting for decision support. However, despite their potential, ecological observations have primarily been used to benchmark process‐based models, as many past and current models lack the capability to directly integrate observations and their associated uncertainties for parameterization. In contrast, data assimilation frameworks such as the CARbon DAta MOdel fraMework (CARDAMOM) and its suite of process‐based models, known as the Data Assimilation Linked Ecosystem Carbon Model (DALEC), are specifically designed for model‐data fusion. This review, motivated by a recent CARDAMOM community workshop, examines the development and applications of CARDAMOM, with an emphasis on its role in advancing ecosystem process understanding. CARDAMOM employs a Bayesian approach, using a Markov Chain Monte Carlo algorithm to enable data‐driven calibration of DALEC parameters and initial states (i.e., carbon pool sizes) through observation operators. CARDAMOM's unique ability to retrieve localized model process parameters from diverse datasets—ranging from in situ measurements to global satellite observations—makes it a highly flexible tool for analyzing spatially variable ecosystem responses to environmental change. However, assimilating these data also presents challenges, including data quality issues that propagate into model skill, as well as trade‐offs between model complexity, parameter equifinality, and predictive performance. We discuss potential solutions to these challenges, such as reducing parameter equifinality by incorporating new observations. This review also offers community recommendations for incorporating emerging datasets, integrating machine learning techniques, strengthening collaboration with remote sensing, field, and modeling communities, and expanding CARDAMOM's relevance for localized ecosystem monitoring and decision‐making. CARDAMOM enables a deep, mechanistic understanding of terrestrial ecosystem dynamics that cannot be achieved through empirical analyses of observational datasets or weakly constrained models alone.
more »
« less
- PAR ID:
- 10636691
- Author(s) / Creator(s):
- ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; more »
- Publisher / Repository:
- Wiley
- Date Published:
- Journal Name:
- Global Change Biology
- Volume:
- 31
- Issue:
- 8
- ISSN:
- 1354-1013
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
Accurate modeling and prediction of soil organic carbon (SOC) stocks are critical for realistic estimates of climate‐carbon feedback and ecosystem carbon sequestration potential. Process‐based models are widely used for simulating the dynamics of SOC stocks but often have considerable uncertainty. Exploring how process‐based models might be better informed by observations is crucial for improving the ability to forecast SOC. In this study, we assimilated the SoilGrids SOC datasets into the Simplified Photosynthesis and Evapotranspiration model for 39 National Ecological Observatory Network (NEON) terrestrial sites across the continental US using the Predictive Ecosystem Analyzer platform. We explored several strategies to determine the best approach for assimilating both SOC data and other indirect data constraints. Our results show that direct and continuous constraint from SoilGrids SOC data is crucial to achieve more accurate and precise SOC and ecosystem respiration states. The effectiveness of data assimilation is strongly determined by the uncertainty of both models and observations across sites, therefore careful characterization and propagation of uncertainties are important. Indirect constraints on SOC from Moderate Resolution Imaging Spectroradiometer leaf area index, LandTrendr aboveground biomass, and Enhanced Soil Moisture Active Passive soil moisture data also help to reduce the uncertainty in SOC prediction. Overall, our results show that data assimilation represents a promising approach to providing more realistic SOC estimates for regional and global carbon budgets in the future.more » « less
-
Soil organic carbon (SOC) represents the largest terrestrial carbon pool. Effectively monitoring SOC at high spatial resolution is crucial for estimating carbon budgets at the ecosystem scale and informing climate change mitigation efforts at the regional scale. Traditional soil sampling methods, however, are laborious and expensive. Remote sensing platforms can be used to survey large landscapes to meet the need for rapid and cost-effective approaches for quantifying SOC at landscape to regional scales, if relationships between remotely sensed variables and SOC can be established. We developed a workflow to analyze and predict SOC content based on National Ecological Observatory Network (NEON) Airborne Observation Platform (AOP) remote sensing data. First, we benchmarked related tools and developed reproducible workflows using NEON remote sensing datasets. Hyperspectral data were extracted from the locations where NEON soil data exist. Additional variables from the LiDAR data and key metadata (climate and land cover) were extracted for those locations. Random Forest and Partial Least Squares Regression techniques were then used to create models for fine-scale SOC prediction. Cross-validation was embedded in the model creation step. The most important covariates were selected through recursive feature elimination, stepwise selection, and expert judgment. Preliminary results indicate that machine learning models can re-produce SOC measurements in testing datasets. Key predictors include topographic variables, vegetation indices, and specific wavelength bands in hyperspectral images. We are further validating our algorithms using SOC data from ISCN (International Soil Carbon Network) and SoDaH (SOils DAta Harmonization database) that are co-located with NEON sites. We are creating high-resolution SOC maps for 0-30 cm depth at NEON sites and testing our algorithms for different land use types. Our work paves the way for a broader assessment of SOC stocks using remote sensing observations, and our high-resolution SOC maps will potentially help quantify carbon budgets across heterogeneous landscapes.more » « less
-
Summary A new proliferation of optical instruments that can be attached to towers over or within ecosystems, or ‘proximal’ remote sensing, enables a comprehensive characterization of terrestrial ecosystem structure, function, and fluxes of energy, water, and carbon. Proximal remote sensing can bridge the gap between individual plants, site‐level eddy‐covariance fluxes, and airborne and spaceborne remote sensing by providing continuous data at a high‐spatiotemporal resolution. Here, we review recent advances in proximal remote sensing for improving our mechanistic understanding of plant and ecosystem processes, model development, and validation of current and upcoming satellite missions. We provide current best practices for data availability and metadata for proximal remote sensing: spectral reflectance, solar‐induced fluorescence, thermal infrared radiation, microwave backscatter, and LiDAR. Our paper outlines the steps necessary for making these data streams more widespread, accessible, interoperable, and information‐rich, enabling us to address key ecological questions unanswerable from space‐based observations alone and, ultimately, to demonstrate the feasibility of these technologies to address critical questions in local and global ecology.more » « less
-
Passive microwave remote sensing of soil moisture is crucial for monitoring the Earth’s water cycle and surface dynamics. The penetration depth during this process is significant, as it influences the accuracy of retrieved soil moisture data. Within L-band remote sensing, tools such as the τ-z model interpret microwave emissions to estimate soil moisture, taking into account the complex interactions between soil and radiation. However, in validating these models against high-temporal-resolution, ground-based measurements, especially from extensive networks like the Terrestrial National Ecological Observatory Network (NEON), further research and validation efforts are needed. This study comprehensively validates the τ-z model’s ability to estimate the soil temperature sensing depth (zTeff) using data from the NEON and Soil Moisture Active Passive (SMAP) satellite missions. A harmonization process was conducted to align the spatial and temporal scales of the two datasets, enabling rigorous validation. We compared soil optical depth (τ)—a parameter capable of theoretically unifying sensing depth representations across wet soil (~0.05 m) to extreme dry/frozen conditions (e.g., up to ~1500 m in ice-equivalent scenarios)—and geometric depth (z) frameworks against outputs from the τ-z model and NEON’s in situ profiles. The results show that: (1) for the profiles that satisfy the monotonic assumption by the τ-z model, zTeff fits the prediction well at about 0.2 τ for the average; (2) Combining SMAP’s soil moisture, the τ-z model achieves high accuracy in estimating zTeff, with RMSD (0.05 m) and unRMSD (0.03 m), and correlations (0.67) between estimated and observed values. The findings are expected to advance remote sensing techniques in various fields, including agriculture, hydrology, and climate change research.more » « less
An official website of the United States government

