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  1. Although the tropical intraseaonal variability (TISV), as the most important predictability sources for subseasonal-to-seasonal (S2S) prediction, is dominated by Madden-Julian oscillation (MJO), its significant fraction does not always share the canonical MJO features, especially when the convective activity arrives at Maritime Continent. In this study, using principal oscillation pattern (POP) analysis on the combined fields of daily equatorial convection and zonal wind, two distinct leading TISV modes with relatively slower e-folding decay rates are identified. One is an oscillatory mode with the period of 51 days and e-folding time of 19 days, capturing the eastward propagating (EP) feature of the canonical MJO. The other is a non-oscillatory damping mode with e-folding time of 13.6 days, capturing a standing dipole (SD) with convection anomalies centered over the Maritime Continent and tropical central Pacific, respectively. Compared to the EP mode, the leading moisture anomalies at low level to the east of convection center are diminish for the SD mode, and instead, the strong negative anomalies of moisture and subsidence motion emerge in the tropical central Pacific area, which may be responsible for the distinct propagation features. Without filtering methods used, timeseries of the two POPs could be applied to the real-time monitoring of EP and SD events in the phase-space diagram. The two modes can serve as the simple and objective approach for a better characterization for diverse natures of TISV beyond the canonical MJO description, which may further shed light on dynamics of the TISV and its predictability. 
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    Free, publicly-accessible full text available October 1, 2025
  2. Soil moisture data assimilation (SM-DA) is a valuable approach for enhancing streamflow prediction in rainfall-runoff models. However, most studies have focused on incorporating remotely sensed SM, and their results strongly depend on the quality of satellite products. Compared with remote sensing products, in situ observed SM data provide greater accuracy and more effectively capture temporal fluctuations in soil moisture levels. Therefore, the effectiveness of SM-DA in improving streamflow prediction remains site-specific and requires further validation. Here, we employed the Ensemble Kalman filter (EnKF) to integrate daily SM into lumped and distributed approaches of the Xinanjiang (XAJ) hydrological model to assess the importance of SM-DA in streamflow prediction. We observed a general improvement in streamflow prediction after conducting SM-DA. Specifically, the Nash-Sutcliffe efficiency increased from 0.61 to 0.65 for the lumped and from 0.62 to 0.70 for the distributed approaches. Moreover, the efficiency of SM-DA exhibits seasonal variation, with in situ SM proving particularly valuable for streamflow prediction during the wet-cold season compared to the dry-warm season. Notably, daily SM data from deep layers exhibit a stronger capability to improve streamflow prediction compared to surface SM. This indicates the significance of deep SM information for streamflow prediction in mountain areas. Overall, this study effectively demonstrates the efficacy of assimilating SM data to improve hydrological models in streamflow prediction. These findings contribute to our understanding of the connection between SM, streamflow, and hydrological connectivity in headwater catchments. 
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    Free, publicly-accessible full text available May 29, 2025
  3. Concave hillslopes, also known as swales, play a pivotal role in facilitating the transfer of water and nutrients from hillslopes to riparian zones in headwater catchments by serving as pathways for surface and subsurface flow. Swales have long been recognized as hydrologic wet spots that contribute significantly to catchment runoff. However, long-term in situ observations have rarely confirmed this conventional understanding. In this study, we present a comprehensive analysis of three years of daily soil moisture measurements taken at multiple depths across 33 sites within a forested catchment to delineate key determinants of soil moisture variation at the catchment scale. Contrary to conventional understanding, our findings indicate that swales may represent areas of lower soil moisture, with those located on sunny hillslopes experiencing a higher frequency of dry conditions, amounting to 13.31% of the time during the study period, when compared to other topographical features such as slopes, valleys, and ridges. Topography alone accounted for less than half of the variation of soil moisture across the catchment. Whereas non-topographic factors (such as vegetation, soil porosity, soil temperature, and soil depth) strongly influenced soil moisture distribution in time and space. To better capture the nuances of soil moisture dynamics, we propose an enhancement to the Topographic Wetness Index (TWI) through the incorporation of non-topographic variables, which improves the model's representation of soil moisture variations. Our findings elucidate the complex interactions between topographic and non-topographic factors in shaping soil moisture dynamics at the catchment scale, offering valuable insights for refining process-based hydrological models and contributing to a deeper understanding of the spatial and temporal variability of soil moisture in headwater catchments. 
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    Free, publicly-accessible full text available May 1, 2025
  4. A Cu or Fe-catalyzed radical ring expansion/coupling cascade was developed. It provides a new access to medium-sized and macrolactones with CN, N3, SCN, and X groups. DFT calculations suggest a Cu(i)/Cu(ii)/Cu(iii) catalytic cycle for the cyanation.

     
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  5. null (Ed.)
    Cell walls are at the front line of interactions between walled-organisms and their environment. They support cell expansion, ensure cell integrity and, for multicellular organisms such as plants, they provide cell adherence, support cell shape morphogenesis and mediate cell–cell communication. Wall-sensing, detecting perturbations in the wall and signaling the cell to respond accordingly, is crucial for growth and survival. In recent years, plant signaling research has suggested that a large family of receptor-like kinases (RLKs) could function as wall sensors partly because their extracellular domains show homology with malectin, a diglucose binding protein from the endoplasmic reticulum of animal cells. Studies of several malectin/malectin-like (M/ML) domain-containing RLKs (M/MLD-RLKs) from the model plant Arabidopsis thaliana have revealed an impressive array of biological roles, controlling growth, reproduction and stress responses, processes that in various ways rely on or affect the cell wall. Malectin homologous sequences are widespread across biological kingdoms, but plants have uniquely evolved a highly expanded family of proteins with ML domains embedded within various protein contexts. Here, we present an overview on proteins with malectin homologous sequences in different kingdoms, discuss the chromosomal organization of Arabidopsis M/MLD-RLKs and the phylogenetic relationship between these proteins from several model and crop species. We also discuss briefly the molecular networks that enable the diverse biological roles served by M/MLD-RLKs studied thus far. 
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  6. Plants are continuously exposed to beneficial and pathogenic microbes, but how plants recognize and respond to friends versus foes remains poorly understood. Here, we compared the molecular response of Arabidopsis thaliana independently challenged with a Fusarium oxysporum endophyte Fo47 versus a pathogen Fo5176. These two F. oxysporum strains share a core genome of about 46 Mb, in addition to 1,229 and 5,415 unique accessory genes. Metatranscriptomic data reveal a shared pattern of expression for most plant genes (about 80%) in responding to both fungal inoculums at all timepoints from 12 to 96 h postinoculation (HPI). However, the distinct responding genes depict transcriptional plasticity, as the pathogenic interaction activates plant stress responses and suppresses functions related to plant growth and development, while the endophytic interaction attenuates host immunity but activates plant nitrogen assimilation. The differences in reprogramming of the plant transcriptome are most obvious in 12 HPI, the earliest timepoint sampled, and are linked to accessory genes in both fungal genomes. Collectively, our results indicate that the A. thaliana and F. oxysporum interaction displays both transcriptome conservation and plasticity in the early stages of infection, providing insights into the fine-tuning of gene regulation underlying plant differential responses to fungal endophytes and pathogens. [Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license . 
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