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Creators/Authors contains: "Panda, Sayak Subhra"

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  1. Biocompatible molecules with electronic functionality provide a promising substrate for biocompatible electronic devices and electronic interfacing with biological systems. Synthetic oligopeptides composed of an aromatic π-core flanked by oligopeptide wings are a class of molecules that can self-assemble in aqueous environments into supramolecular nanoaggregates with emergent optical and electronic activity. We present an integrated computational–experimental pipeline employing all-atom molecular dynamics simulations and experimental UV-visible spectroscopy within an active learning workflow using deep representational learning and multi-objective and multi-fidelity Bayesian optimization to design π-conjugated peptides programmed to self-assemble into elongated pseudo-1D nanoaggregates with a high degree of H-type co-facial stacking of the π-cores. We consider as our design space the 694 982 unique π-conjugated peptides comprising a quaterthiophene π-core flanked by symmetric oligopeptide wings up to five amino acids in length. After sampling only 1181 molecules (∼0.17% of the design space) by computation and 28 (∼0.004%) by experiment, we identify and experimentally validate a diversity of previously unknown high-performing molecules and extract interpretable design rules linking peptide sequence to emergent supramolecular structure and properties. 
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  2. null (Ed.)
    Peptidic sequences when conjugated to π-electronic groups form self-assembled networks of π-electron pathways. These materials hold promise for bio-interfacing charge transporting applications because of their aqueous processability and compatibility. In this work, we incorporated diketopyrrolopyrrole (DPP), a well-established π-core for organic electronic applications, within the peptidic sequence. We embedded different numbers of thiophene rings (2 and 3) on both sides of the DPP to alter the length of the π-cores. We also varied the length of the N-alkyl side chains (methyl, butyl, hexyl) attached to the DPP core. These variations allowed us to explicitly study the effect of π-core and N-alkyl side-chain length on photophysical properties and morphology of the resulting nanomaterials. All of these molecules formed H-type aggregates in the assembled state. Longer π-cores have relatively red-shifted absorption maxima, whereas the N-alkyl variation did not present significant photophysical changes. 
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  3. null (Ed.)
  4. The field of organic electronics continues to be driven by new charge-transporting materials that are typically processed from toxic organic solvents incompatible with biological environments. Over the past few decades, powerful examples of electrical transport as mediated through protein-based macromolecules have fueled the emerging area of organic bioelectronics. These attractive bioinspired architectures have enabled several important applications that draw on their functional electrical properties, ranging from field-effect transistors to piezoelectrics. In addition to naturally occurring protein biomacromolecules, unnatural oligopeptide self-assemblies and peptide–π conjugates also exhibit interesting electrical applications. This review provides an overview of electrical transport and electrical polarization in specialized biomaterials as manifested in solid-state device architectures. 
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