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Discovering new deep hydrothermal vent systems is one of the biggest challenges in ocean exploration. They are a unique window to elucidate the physical, geochemical, and biological processes that occur on the seafloor and are involved in the evolution of life on Earth. In this study, we present a molecular analysis of the microbial composition within the newly discovered hydrothermal vent field,JaichMaa ‘ja ‘ag, situated in the Southern Pescadero Basin within the Gulf of California. During the cruise expedition FK181031 in 2018, 33 sediment cores were collected from various sites within the Pescadero vent fields and processed for 16S rRNA amplicon sequence variants (ASVs) and geochemical analysis. Correlative analysis of the chemical composition of hydrothermal pore fluids and microbial abundances identified several sediment-associated phyla, including Thermotogota, that appear to be enriched in sediment horizons impacted by hydrothermal fluid flow. Comparative analysis of Thermotogota with the previously exploredAukahydrothermal vent field situated 2 km away displayed broad similarity between the two locations, although at finer scales (e.g., ASV level), there were notable differences that point to core-to-core and site-level factors revealing distinct patterns of distribution and abundance within these two sediment-hosted hydrothermal vent fields. These patterns are intricately linked to the specific physical and geochemical conditions defining each vent, illuminating the complexity of this unique deep ocean chemosynthetic ecosystem. 

Abstract Magma emplacement in the top unconsolidated sediments of rift basins is poorly understood. We compare two shallow sills from the Guaymas Basin (Gulf of California) using core data and analyses from IODP Expedition 385, and high‐resolution 2D seismic data. We show that magma stalling in the top uncemented sediment layer is controlled by the transition from siliceous claystone to uncemented silica‐rich sediment, favoring flat sill formation. Space is created through a combination of viscous indentation, magma‐sediment mingling and fluidization processes. We show that sills emplace above the opal‐A/CT diagenetic barrier. Our model suggests that in low magma input regions sills emplace at constant depth from the seafloor, while high magma input leads to upward stacking of sills, culminating in a funnel‐shaped intrusions. Our petrophysical, petrographic, and textural analyses show that magma‐sediment mingling creates significant porosity (up to 20%) through thermal cracking of the assimilated sediment. Stable isotope data suggest carbonate formation at 70–90°C, consistent with background geothermal gradient at 250–325 m depth. The unconsolidated, water‐rich host sediments produce little thermogenic gas through contact metamorphism, but deep diagenetically formed gas bypasses the low‐permeability top sediments via hydrothermal fluids flowing through the magma plumbing system. This hydrothermal system provides a steady supply of hydrocarbons at temperatures amendable for microbial life, serving as an incubator that may be abundant in magma‐rich young rift basins and play a key role in sustaining subseafloor ecosystems.