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  1. Tertiary chirality describes the handedness of supramolecular assemblies and relies not only on the primary and secondary structures of the building blocks but also on topological driving forces that have been sparsely characterized. Helical biopolymers, especially DNA, have been extensively investigated as they possess intrinsic chirality that determines the optical, mechanical, and physical properties of the ensuing material. Here, we employ the DNA tensegrity triangle as a model system to locate the tipping points in chirality inversion at the tertiary level by X-ray diffraction. We engineer tensegrity triangle crystals with incremental rotational steps between immobile junctions from 3 to 28 base pairs (bp). We construct a mathematical model that accurately predicts and explains the molecular configurations in both this work and previous studies. Our design framework is extendable to other supramolecular assemblies of helical biopolymers and can be used in the design of chiral nanomaterials, optically active molecules, and mesoporous frameworks, all of which are of interest to physical, biological, and chemical nanoscience. 
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  2. A braided Frobenius algebra is a Frobenius algebra with a Yang–Baxter operator that commutes with the operations, that are related to diagrams of compact surfaces with boundary expressed as ribbon graphs. A heap is a ternary operation exemplified by a group with the operation [Formula: see text], that is ternary self-distributive. Hopf algebras can be endowed with the algebra version of the heap operation. Using this, we construct braided Frobenius algebras from a class of certain Hopf algebras that admit integrals and cointegrals. For these Hopf algebras we show that the heap operation induces a Yang–Baxter operator on the tensor product, which satisfies the required compatibility conditions. Diagrammatic methods are employed for proving commutativity between Yang–Baxter operators and Frobenius operations. 
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  3. null (Ed.)
    We investigate constructions of higher arity self-distributive operations, and give relations between cohomology groups corresponding to operations of different arities. For this purpose we introduce the notion of mutually distributive [Formula: see text]-ary operations generalizing those for the binary case, and define a cohomology theory labeled by these operations. A geometric interpretation in terms of framed links is described, with the scope of providing algebraic background of constructing [Formula: see text]-cocycles for framed link invariants. This theory is also studied in the context of symmetric monoidal categories. Examples from Lie algebras, coalgebras and Hopf algebras are given. 
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  4. null (Ed.)
  5. null (Ed.)
    A double occurrence word (DOW) is a word in which every symbol appears exactly twice. We define the symbol separation of a DOW [Formula: see text] to be the number of letters between the two copies of a symbol, and the separation of [Formula: see text] to be the sum of separations over all symbols in [Formula: see text]. We then analyze relationship among size, reducibility and separation of DOWs. Specifically, we provide tight bounds of separations of DOWs with a given size and characterize the words that attain those bounds. We show that all separation numbers within the bounds can be realized. We present recursive formulas for counting the numbers of DOWs with a given separation under various restrictions, such as the number of irreducible factors. These formulas can be obtained by inductive construction of all DOWs with the given separation. 
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  6. McQuillan, I.; Seki, S. (Ed.)
    We classify rectangular DNA origami structures according to their scaffold and staples organization by associating a graphical representation to each scaffold folding. Inspired by well studied Temperley-Lieb algebra, we identify basic modules that form the structures. The graphical description is obtained by ‘gluing’ basic modules one on top of the other. To each module we associate a symbol such that gluing of molecules corresponds to concatenating the associated symbols. Every word corresponds to a graphical representation of a DNA origami structure. A set of rewriting rules defines equivalent words that correspond to the same graphical structure. We propose two different types of basic module structures and corresponding rewriting rules. For each type, we provide the number of all possible structures through the number of equivalence classes of words. We also give a polynomial time algorithm that computes the shortest word for each equivalence class. 
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