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Singh, Gagandeep; Dasanayake, Gaya S.; Chism, Claylee M.; Vashisth, Priyavrat; Kaur, Amandeep; Misra, Sandeep Kumar; Sharp, Joshua S.; Tanner, Eden E. (, Materials Chemistry Frontiers)Schematic representation of preferential uptake of good's buffer-coated PLGA nanoparticles into human breast cancer cells. Created with biorender.com.more » « less
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Dwivedi, Rohini; Farrag, Marwa; Sharma, Poonam; Shi, Deling; Shami, Anter A.; Misra, Sandeep K.; Ray, Priya; Shukla, Jayanti; Zhang, Fuming; Linhardt, Robert J.; et al (, Journal of Natural Products)
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Khaje, Niloofar Abolhasani; Eletsky, Alexander; Biehn, Sarah E.; Mobley, Charles K.; Rogals, Monique J.; Kim, Yoonkyoo; Mishra, Sushil K.; Doerksen, Robert J.; Lindert, Steffen; Prestegard, James H.; et al (, Communications Biology)Abstract High resolution hydroxyl radical protein footprinting (HR-HRPF) is a mass spectrometry-based method that measures the solvent exposure of multiple amino acids in a single experiment, offering constraints for experimentally informed computational modeling. HR-HRPF-based modeling has previously been used to accurately model the structure of proteins of known structure, but the technique has never been used to determine the structure of a protein of unknown structure. Here, we present the use of HR-HRPF-based modeling to determine the structure of the Ig-like domain of NRG1, a protein with no close homolog of known structure. Independent determination of the protein structure by both HR-HRPF-based modeling and heteronuclear NMR was carried out, with results compared only after both processes were complete. The HR-HRPF-based model was highly similar to the lowest energy NMR model, with a backbone RMSD of 1.6 Å. To our knowledge, this is the first use of HR-HRPF-based modeling to determine a previously uncharacterized protein structure.more » « less
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