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Abstract PurposeTo develop a robust single breath‐hold approach for volumetric lung imaging at 0.55T. MethodA balanced‐SSFP (bSSFP) pulse sequence with 3D stack‐of‐spiral (SoS) out‐in trajectory for volumetric lung imaging at 0.55T was implemented. With 2.7× undersampling, the pulse sequence enables imaging during a 17‐s breath‐hold. Image reconstruction is performed using 3D SPIRiT and 3D l1‐Wavelet regularizations. In two healthy volunteers, single breath‐hold SoS out‐in bSSFP was compared against stack‐of‐spiral UTE (spiral UTE) and half‐radial dual‐echo bSSFP (bSTAR), based on signal intensity (SI), blood‐lung parenchyma contrast, and image quality. In six patients with pathologies including lung nodules, fibrosis, emphysema, and air trapping, single breath‐hold SoS out‐in and bSTAR were compared against low‐dose computed tomography (LDCT). ResultsSoS out‐in bSSFP achieved 2‐mm isotropic resolution lung imaging with a single breath‐hold duration of 17 s. SoS out‐in (2‐mm isotropic) provided higher lung parenchyma and blood SI and blood‐lung parenchyma contrast compared to spiral UTE (2.4 × 2.4 × 2.5 mm3) and bSTAR (1.6‐mm isotropic). When comparing SI normalized by voxel size, SoS out‐in has lower lung parenchyma signal, higher blood signal, and a higher blood‐lung parenchyma contrast compared to bSTAR. In patients, SoS out‐in bSSFP was able to identify lung fibrosis and lung nodules of size 4 and 8 mm, and breath‐hold bSTAR was able to identify lung fibrosis and 8 mm nodules. ConclusionSingle breath‐hold volumetric lung imaging at 0.55T with 2‐mm isotropic spatial resolution is feasible using SoS out‐in bSSFP. This approach could be useful for rapid lung disease screening, and in cases where free‐breathing respiratory navigated approaches fail.more » « less
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We present the ensemble method of prescreening-based subset selection to improve ensemble predictions of Earth system models (ESMs). In the prescreening step, the independent ensemble members are categorized based on their ability to reproduce physically-interpretable features of interest that are regional and problem-specific. The ensemble size is then updated by selecting the subsets that improve the performance of the ensemble prediction using decision relevant metrics. We apply the method to improve the prediction of red tide along the West Florida Shelf in the Gulf of Mexico, which affects coastal water quality and has substantial environmental and socioeconomic impacts on the State of Florida. Red tide is a common name for harmful algal blooms that occur worldwide, which result from large concentrations of aquatic microorganisms, such as dinoflagellate Karenia brevis , a toxic single celled protist. We present ensemble method for improving red tide prediction using the high resolution ESMs of the Coupled Model Intercomparison Project Phase 6 (CMIP6) and reanalysis data. The study results highlight the importance of prescreening-based subset selection with decision relevant metrics in identifying non-representative models, understanding their impact on ensemble prediction, and improving the ensemble prediction. These findings are pertinent to other regional environmental management applications and climate services. Additionally, our analysis follows the FAIR Guiding Principles for scientific data management and stewardship such that data and analysis tools are findable, accessible, interoperable, and reusable. As such, the interactive Colab notebooks developed for data analysis are annotated in the paper. This allows for efficient and transparent testing of the results’ sensitivity to different modeling assumptions. Moreover, this research serves as a starting point to build upon for red tide management, using the publicly available CMIP, Coordinated Regional Downscaling Experiment (CORDEX), and reanalysis data.more » « less
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Elshall, Ahmed; Ye, Ming (Ed.)Bayesian model evidence (BME) is a measure of the average fit of a model to observation data given all the parameter values that the model can assume. By accounting for the trade-off between goodness-of-fit and model complexity, BME is used for model selection and model averaging purposes. For strict Bayesian computation, the theoretically unbiased Monte Carlo based numerical estimators are preferred over semi-analytical solutions. This study examines five BME numerical estimators and asks how accurate estimation of the BME is important for penalizing model complexity. The limiting cases for numerical BME estimators are the prior sampling arithmetic mean estimator (AM) and the posterior sampling harmonic mean (HM) estimator, which are straightforward to implement, yet they result in underestimation and overestimation, respectively. We also consider the path sampling methods of thermodynamic integration (TI) and steppingstone sampling (SS) that sample multiple intermediate distributions that link the prior and the posterior. Although TI and SS are theoretically unbiased estimators, they could have a bias in practice arising from numerical implementation. For example, sampling errors of some intermediate distributions can introduce bias. We propose a variant of SS, namely the multiple one-steppingstone sampling (MOSS) that is less sensitive to sampling errors. We evaluate these five estimators using a groundwater transport model selection problem. SS and MOSS give the least biased BME estimation at an efficient computational cost. If the estimated BME has a bias that covariates with the true BME, this would not be a problem because we are interested in BME ratios and not their absolute values. On the contrary, the results show that BME estimation bias can be a function of model complexity. Thus, biased BME estimation results in inaccurate penalization of more complex models, which changes the model ranking. This was less observed with SS and MOSS as with the three other methods.more » « less