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Seasonal changes in light and physicochemical conditions have strong impacts on cyanobacteria, but how they affect community structure, metabolism, and biogeochemistry of cyanobacterial mats remains unclear. Light may be particularly influential for cyanobacterial mats exposed to sulphide by altering the balance of oxygenic photosynthesis and sulphide‐driven anoxygenic photosynthesis. We studied temporal shifts in irradiance, water chemistry, and community structure and function of microbial mats in the Middle Island Sinkhole (MIS), where anoxic and sulphate‐rich groundwater provides habitat for cyanobacteria that conduct both oxygenic and anoxygenic photosynthesis. Seasonal changes in light and groundwater chemistry were accompanied by shifts in bacterial community composition, with a succession of dominant cyanobacteria fromPhormidiumtoPlanktothrix, and an increase in diatoms, sulphur‐oxidizing bacteria, and sulphate‐reducing bacteria from summer to autumn. Differential abundance of cyanobacterial light‐harvesting proteins likely reflects a physiological response of cyanobacteria to light level.Beggiatoasulphur oxidation proteins were more abundant in autumn. Correlated abundances of taxa through time suggest interactions between sulphur oxidizers and sulphate reducers, sulphate reducers and heterotrophs, and cyanobacteria and heterotrophs. These results support the conclusion that seasonal change, including light availability, has a strong influence on community composition and biogeochemical cycling of sulphur and O₂in cyanobacterial mats.

The isotopic composition of precipitation is used to trace water cycling and climate change, but interpretations of the environmental information recorded in central Andean precipitation isotope ratios are hindered by a lack of multi‐year records, poor spatial distribution of observations, and a predominant focus on Rayleigh distillation. To better understand isotopic variability in central Andean precipitation, we present a three‐year record of semimonthly δ¹⁸O_pand δ²H_pvalues from 15 stations in southern Peru and triple oxygen isotope data, expressed as ∆′¹⁷O_p, from 32 precipitation samples. Consistent with previous work, we find that elevation correlates negatively with δ¹⁸O_pand that seasonal δ¹⁸O_pvariations are related to upstream rainout and local convection. Spatial δ¹⁸O_pvariations and atmospheric back trajectories show that both eastern‐ and western‐derived air masses bring precipitation to southern Peru. Seasonal d‐excess_pcycles record moisture recycling and relative humidity at remote moisture sources, and both d‐excess_pand ∆′¹⁷O_pclearly differentiate evaporated and non‐evaporated samples. These results begin to establish the natural range of unevaporated ∆′¹⁷O_pvalues in the central Andes and set the foundation for future paleoclimate and paleoaltimetry studies in the region. This study highlights the hydrologic understanding that comes from a combination of δ¹⁸O_p, d‐excess_p, and ∆′¹⁷O_pdata and helps identify the evaporation, recycling, and rainout processes that drive water cycling in the central Andes.