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Park, Younggeun; Ryu, Byunghoon; Deng, Qiufang; Pan, Baihong; Song, Yujing; Tian, Yuzi; Alam, Hasan B.; Li, Yongqing; Liang, Xiaogan; Kurabayashi, Katsuo (, Small)
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Chung, Meng Ting; Kurabayashi, Katsuo; Cai, Dawen (, Lab on a Chip)Recent advances in transcriptomic analysis at single-cell resolution reveal cell-to-cell heterogeneity in a biological sample with unprecedented resolution. Partitioning single cells in individual micro-droplets and harvesting each cell's mRNA molecules for next-generation sequencing has proven to be an effective method for profiling transcriptomes from a large number of cells at high throughput. However, the assays to recover the full transcriptomes are time-consuming in sample preparation and require expensive reagents and sequencing cost. Many biomedical applications, such as pathogen detection, prefer highly sensitive, reliable and low-cost detection of selected genes. Here, we present a droplet-based microfluidic platform that permits seamless on-chip droplet sorting and merging, which enables completing multi-step reaction assays within a short time. By sequentially adding lysis buffers and reactant mixtures to micro-droplet reactors, we developed a novel workflow of single-cell reverse transcription loop-mediated-isothermal amplification (scRT-LAMP) to quantify specific mRNA expression levels in different cell types within one hour. Including single cell encapsulation, sorting, lysing, reactant addition, and quantitative mRNA detection, the fully on-chip workflow provides a rapid, robust, and high-throughput experimental approach for a wide variety of biomedical studies.more » « less
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Park, Younggeun; Ryu, Byunghoon; Liang, Xiaogan; Kurabayashi, Katsuo (, IEEE 6th International Workshop on Low Temperature Bonding for 3D Integration (LTB-3D))We report on system integration of plasmonic nanoparticles and a few-layered molybdenum disulfide (M0S2) photoconductive nanochannel sheet on a silicon substrate. Plasma-assisted electrostatic bonding and van der Waals bonding are employed to create a high-sensitivity photoelectronic biosensor for immunological analysis.more » « less
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