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The breadfruit genus Artocarpus J.R.Forst. & G.Forst. (Moraceae) has sixteen species in Singapore, fourteen of them native. In this precursory study to the treatment of Artocarpus for the Flora of Singapore, we present updated phylogenomic analyses of Artocarpus subgenus Artocarpus based on 517 nuclear genes. The following taxonomic changes based on recent phylogenetic analyses, review of herbarium specimens, and field observations, are proposed. Artocarpus subg. Cauliflori (F.M.Jarrett) Zerega is reduced to a section within Artocarpus subg. Artocarpus, and Artocarpus sect. Glandulifolium F.M.Jarrett is raised to subgenus status. The new monotypic subgenus Artocarpus subg. Aenigma E.M.Gardner & Zerega is proposed for Artocarpus sepicanus Diels, whose phylogenetic position remains uncertain and may be of ancient hybrid origin. Artocarpus elasticus Reinw. ex Blume, A. scortechinii King and A. corneri Kochummen are recognised as distinct species. Artocarpus clementis Merr. is reinstated as distinct from A. lanceifolius Roxb. Artocarpus calophyllus Kurz and A. melinoxylus Gagnep. are reinstated as distinct from both A. chama Buch.-Ham. and A. rigidus Blume. Artocarpus nigrescens Elmer is reinstated as distinct from A. treculianus Elmer. Keys to the subgenera, the sections of Artocarpus subg. Artocarpus and to the species found in Singapore are presented. A nomenclatural synopsis of subgenera Artocarpus, Aenigma and Glandulifolium is presented with taxonomic notes to aid in identification. Seventeen lectotypes, six of them in a second step, and two neotypes are designated. 

The protologue of Balanostreblus ilicifolius Kurz included the citation of specimens from Bangladesh and Myanmar of a plant now called Taxotrophis ilicifolia (Kurz) S.Vidal. However, the description in the protologue and the accompanying illustration were based largely on the Neotropical Sorocea guilleminiana Gaudich., which was cultivated in the Royal Botanic Garden, Calcutta and has similar vegetative characters. This paper seeks to resolve a century of confusion over the identity of Balanostreblus ilicifolius and reviews its history in light of historical correspondence relating to its identity and the trans-continental exchange of plants under British colonialism. The paper concludes that a previous attempt to typify Balanostreblus ilicifolius with an uncited cultivated specimen of Sorocea guilleminiana should be superseded with material from Myanmar cited in the protologue. A lectotype is designated, fixing the application of the name, which can now serve as the basionym of Taxotrophis ilicifolia. 

Abstract— Artocarpus bergii , named for the late C. C. Berg, is from Halmahera in the Moluccas, and is a close ally of breadfruit ( A. altilis ). The species resembles the Micronesian A. mariannensis but with generally smaller parts. Because it is known from only a small area and the type locality is a potential mining site, A. bergii is likely of conservation concern, particularly given its status as a crop wild relative. 

The breadfruit genus (Artocarpus J.R.Forst. & G.Forst., Moraceae) has 16 species in Singapore, 14 of them native. The following taxonomic changes in Artocarpus subgenus Pseudojaca Trécul, based on recent phylogenetic work, are presented with diagnostic characters. Artocarpus griffithii (King) Merr. is reinstated as distinct from A. lamellosus Blanco (which is called A. nitidus Trécul in the earlier literature), also requiring the reinstatement of the following taxa not found in Singapore: A. borneensis (Merr.) F.M.Jarrett, A. humilis Becc., A. vrieseanus Miq. var. subsessilis F.M.Jarrett and A. xanthocarpus Merr. Artocarpus dadah Miq. is reinstated as distinct from A. lacucha Roxb. ex Buch.-Ham., thereby necessitating the reinstatement of the following taxa not found in Singapore: A. fretessii Teijsm. & Binn. ex Hassk., A. ovatus Blanco, and A. vrieseanus var. refractus (Becc.) F.M.Jarrett. Artocarpus gomezianus Wall. ex Trécul is restricted to the type subspecies, and A. zeylanicus (F.M.Jarrett) E.M.Gardner & Zerega, formerly a subspecies, is elevated to species level. Thirteen lectotypes and two neotypes are designated. 

Abstract We present a 517-gene phylogenetic framework for the breadfruit genus Artocarpus (ca. 70 spp., Moraceae), making use of silica-dried leaves from recent fieldwork and herbarium specimens (some up to 106 years old) to achieve 96% taxon sampling. We explore issues relating to assembly, paralogous loci, partitions, and analysis method to reconstruct a phylogeny that is robust to variation in data and available tools. Although codon partitioning did not result in any substantial topological differences, the inclusion of flanking noncoding sequence in analyses significantly increased the resolution of gene trees. We also found that increasing the size of data sets increased convergence between analysis methods but did not reduce gene-tree conflict. We optimized the HybPiper targeted-enrichment sequence assembly pipeline for short sequences derived from degraded DNA extracted from museum specimens. Although the subgenera of Artocarpus were monophyletic, revision is required at finer scales, particularly with respect to widespread species. We expect our results to provide a basis for further studies in Artocarpus and provide guidelines for future analyses of data sets based on target enrichment data, particularly those using sequences from both fresh and museum material, counseling careful attention to the potential of off-target sequences to improve resolution. [Artocarpus; Moraceae; noncoding sequences; phylogenomics; target enrichment.] 

Recent taxonomic work on Artoarpus has revealed two undescribed species from Thailand and Vietnam. Artocarpus rubrosoccatus, endemic to peninsular Thailand, resembles A. lacucha but is distinguished by its deep red clavate staminate inflorescences. Artocarpus montanus is found in the montane regions of southern and central Vietnam, and perhaps also in Thailand. This species resembles the vegetative parts of A. lowii and A. excelsus, but A. montanus differs in its longer syncarp processes and its geographic distribution. The vast majority of Artocarpus species are found in tropical lowlands, and A. montanus, along with A. excelsus, represent the only known members of the genus that are restricted to montane habitats. The provisional conservation assessment of both new species is Near Threatened, because although their known areas of occupancy are restricted, both occur in protected areas.