Plant microbiomes are known to influence host fitness and ecosystem functioning, but mechanisms regulating their structure are poorly understood. Here, we explored the assembly mechanisms of leaf epiphytic and endophytic bacterial communities using a subtropical forest biodiversity experiment. Both epiphytic and endophytic bacterial diversity increased as host tree diversity increased. However, the increased epiphytic diversity in more diverse forests was driven by greater epiphytic diversity (i.e. greater
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Abstract α ‐diversity) on individual trees, whereas the increased endophytic diversity in more diverse forests was driven by greater dissimilarity in endophytic composition (i.e. greaterβ ‐diversity) among trees. Mechanistically, responses of epiphytes to changes in host diversity were consistent with mass effects, whereas responses of endophytes were consistent with species sorting.Synthesis . These results provided novel experimental evidence that biodiversity declines of plant species will lead to biodiversity declines of plant‐associated microbiomes, but the underlying mechanism may differ between habitats on the plant host. -
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Abstract Elton's biotic resistance hypothesis, which posits that diverse communities should be more resistant to biological invasions, has received considerable experimental support. However, it remains unclear whether such a negative diversity–invasibility relationship would persist under anthropogenic environmental change. By using the common ragweed (
Ambrosia artemisiifolia ) as a model invader, our 4‐year grassland experiment demonstrated consistently negative relationships between resident species diversity and community invasibility, irrespective of nitrogen addition, a result further supported by a meta‐analysis. Importantly, our experiment showed that plant diversity consistently resisted invasion simultaneously through increased resident biomass, increased trait dissimilarity among residents, and increased community‐weighted means of resource‐conservative traits that strongly resist invasion, pointing to the importance of both trait complementarity and sampling effects for invasion resistance even under resource enrichment. Our study provides unique evidence that considering species’ functional traits can help further our understanding of biotic resistance to biological invasions in a changing environment. -
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Abstract Although parasites are known to have various effects on their hosts, we know little about their role in the assembly of diversifying host populations. Using an experimental bacterium (Pseudomonas fluorescens SBW25)-bacteriophage (ϕ2) system, we show that earlier parasite arrival significantly reduced the repeatability of host diversification. Earlier parasite arrival amplified the priority effects associated with the stochastic emergence of novel SBW25 phenotypes, translating into greater historical contingency in SBW25 diversification. Our results highlight the important role of parasite-host interactions in driving host adaptive radiation.
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Abstract Although the positive effects of biodiversity on ecosystem functioning and stability have been extensively documented in the literature, previous studies have mostly explored the mechanisms of functioning and stability independently. It is unclear how biodiversity effects on functioning may covary with those on stability.
Here we developed an integrated framework to explore links between mechanisms underlying biodiversity effects on functioning and those on stability. Specifically, biodiversity effects on ecosystem functioning were partitioned into complementarity effects (
CE ) and selection effects (SE ), and those on stability were partitioned into species asynchrony and species stability. We investigated howCE andSE were linked to species asynchrony and stability and how their links might be mediated by species evenness, using a multi‐site grassland experiment.Our mixed‐effects models showed that a higher community productivity was mainly due to
CE and a higher community stability was mainly due to species asynchrony. Moreover,CE was positively related to species asynchrony, thus leading to a positive association between ecosystem productivity and stability.We used a structural equation model to illustrate how species evenness might mediate links between the various mechanisms. Communities with a higher evenness exhibited a higher
CE and species asynchrony, but a lowerSE and species stability. These evenness‐mediated associations enhanced the positive relationship betweenCE and species asynchrony, but blurred that betweenSE and species asynchrony.Synthesis . Our findings demonstrate mechanistic links between biodiversity effects on ecosystem functioning and stability. By doing so, our study contributes a novel framework for understanding ecological mechanisms of the functioning–stability relationship, which has important implications for developing management plans focused on strengthening synergies between ecosystem functioning and stability over the long term. -
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Abstract Microbes, similar to plants and animals, exhibit biogeographic patterns. However, in contrast with the considerable knowledge on the island biogeography of higher organisms, we know little about the distribution of microorganisms within and among islands. Here, we explored insular soil bacterial and fungal biogeography and underlying mechanisms, using soil microbiota from a group of land-bridge islands as a model system. Similar to island species-area relationships observed for many macroorganisms, both island-scale bacterial and fungal diversity increased with island area; neither diversity, however, was affected by island isolation. By contrast, bacterial and fungal communities exhibited strikingly different assembly patterns within islands. The loss of bacterial diversity on smaller islands was driven primarily by the systematic decline of diversity within samples, whereas the loss of fungal diversity on smaller islands was driven primarily by the homogenization of community composition among samples. Lower soil moisture limited within-sample bacterial diversity, whereas smaller spatial distances among samples restricted among-sample fungal diversity, on smaller islands. These results indicate that among-island differences in habitat quality generate the bacterial island species-area relationship, whereas within-island dispersal limitation generates the fungal island species-area relationship. Together, our study suggests that different mechanisms underlie similar island biogeography patterns of soil bacteria and fungi.
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Summary Global environmental change is altering the Earth's ecosystems. However, much research has focused on ecosystem‐level responses, and we know substantially less about community‐level responses to global change stressors.
Here we conducted a 6‐yr field experiment in a high‐altitude (4600 m asl) alpine grassland on the Tibetan Plateau to explore the effects of nitrogen (N) addition and rising atmospheric CO2concentration on plant communities.
Our results showed that N and CO2enrichment had synergistic effects on alpine grassland communities. Adding nitrogen or CO2alone did not alter total community biomass, species diversity or community composition, whereas adding both resources together increased community biomass, reduced species diversity and altered community composition. The observed decline in species diversity under simultaneous N and CO2enrichment was associated with greater community biomass and lower soil water content, and driven by the loss of species characterised simultaneously by tall stature and small specific leaf area.
Our findings point to the co‐limitation of alpine plant community biomass and structure by nitrogen and CO2, emphasising the need for future studies to consider multiple aspects of global environmental change together to gain a more complete understanding of their ecological consequences.
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Abstract Ecosystem stability is essential to its sustainable functions and services to humanity. Although climate warming is projected to vary from 1 to 5°C by the end of 21st century, how the temporal stability of plant community biomass production responds to different warming scenarios remains unclear.
To fill this knowledge gap, we conducted a 6‐year field experiment with three levels of warming treatments (control, +1.5°C, +2.5°C) by using infrared radiators, in an alpine meadow on the Qinghai–Tibet Plateau.
We found that low‐level warming (+1.5°C), compared to the control, did not significantly change the temporal stability of plant community biomass production and its underlying causes, including species diversity, compensatory dynamics, mean–variance scaling, biomass temporal stability of plant population (the average of temporal stability of species biomass production of all species in the community) or dominant species. However, high‐level warming (+2.5°C) significantly reduced them. Species diversity was not a significant predictor of temporal stability of plant community biomass production in this species‐rich ecosystem, regardless of the magnitude of warming, while co‐existing species compensatory dynamics and the biomass temporal stability of dominant species determined the response of temporal stability of plant community biomass production to warming.
Synthesis . Our results suggest that the responses of plant community biomass temporal stability and its underlying mechanisms to climate warming depend on warming magnitudes. The findings highlight the various responses of ecosystem functions and services to different warming scenarios and imply that ecosystem will fail to maintain and provide stable biomass‐related services for humanity under high‐level climate warming. -
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Summary The study of islands has made substantial contributions to the development of evolutionary and ecological theory. However, we know little about microbial community assembly on islands. Using soil microbial data collected from 29 lake islands and nearby mainland, we examined the assembly mechanisms of soil bacterial and fungal communities among and within islands. We found that deterministic processes, especially homogeneous selection, tended to be more important in shaping the assembly of soil bacterial communities among islands, while stochastic processes tended to be more important within islands. Moreover, increasing island area increased the importance of homogeneous selection, but reduced the importance of variable selection, for soil bacterial community assembly within islands. By contrast, stochastic processes tended to dominate soil fungal community assembly both among and within islands, with dispersal limitation playing a more important role within than among islands. Our results highlight the scale‐ and taxon‐dependence of insular soil microbial community assembly, suggesting that spatial scale should be explicitly considered when evaluating the influences of habitat fragmentation on soil microbial communities.
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Abstract Anthropogenic environmental changes are known to affect the Earth's ecosystems. However, how these changes influence assembly trajectories of the impacted communities remains a largely open question.
In this study, we investigated the effect of elevated nitrogen (N) deposition and increased precipitation on plant taxonomic and phylogenetic β‐diversity in a 9‐year field experiment in the temperate semi‐arid steppe of Inner Mongolia, China.
We found that both N and water addition significantly increased taxonomic β‐diversity, whereas N, not water, addition significantly increased phylogenetic β‐diversity. After the differences in local species diversity were controlled using null models, the standard effect size of taxonomic β‐diversity still increased with both N and water addition, whereas water, not N, addition, significantly reduced the standard effect size of phylogenetic β‐diversity. The increased phylogenetic convergence observed in the water addition treatment was associated with colonizing species in each water addition plot being more closely related to species in other replicate plots of the same treatment. Species colonization in this treatment was found to be trait‐based, with leaf nitrogen concentration being the key functional trait.
Synthesis. Our analyses demonstrate that anthropogenic environmental changes may affect the assembly trajectories of plant communities at both taxonomic and phylogenetic scales. Our results also suggest that while stochastic processes may cause communities to diverge in species composition, deterministic process could still drive communities to converge in phylogenetic community structure.
